Gene Details:
- MSU gene ID: LOC_Os04g52230
- RAPdb gene ID: Os04g0611800
- Gene Symbol: OsKS1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- The OsKS1 mutant seedlings were responsive to exogenous gibberellin (GA3).
- 3 kb were detected in leaves and stem of wild-type plants, but not in germinating seeds or roots, suggesting that OsKS1 is not involved in germination or root growth.
- Expression of OsKS1, one of the genes encoding for GA biosynthetic enzymes, was suppressed in the antisense transgenic lines.
- The expression levels of gibberellin (GA) biosynthetic genes including OsCPS1, OsKS1, OsKO1, OsKAO, OsGA20ox2/SD1 and OsGA2ox3 were significantly increased in d62 mutant.
- As mutations in three recently reported rice GA-responsive dwarf mutant alleles and the dwarf mutation identified in this study mapped to the same locus, we designate the corresponding gene OsKS1.
Function-related keywords:
Literature:
- Isolation and characterization of a Ds-tagged rice (Oryza sativa L.) GA-responsive dwarf mutant defective in an early step of the gibberellin biosynthesis pathway . DOI: 10.1007/s00299-004-0896-6 ; PMID: 15668792
- Identification and characterization of dwarf 62, a loss-of-function mutation in DLT/OsGRAS-32 affecting gibberellin metabolism in rice . DOI: 10.1007/s00425-010-1263-1 ; PMID: 20830595
- The rice OsLOL2 gene encodes a zinc finger protein involved in rice growth and disease resistance . DOI: 10.1007/s00438-007-0232-2 ; PMID: 17404758
- An overview of gibberellin metabolism enzyme genes and their related mutants in rice . DOI: 10.1104/pp.103.033696 ; PMID: 15075394
Related News:
Gene Resources:
- NCBI ID: AY347876
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os04g52230.1
AGGCCACACCTCGGAGCCCCACACACGCACTCCCCTCGCCCTCGCCCTCGCCGGCGCGCCGCCCCTCTCCGGCCCTGCGCCGCCGTGGTCGCCCTAGACCCCCCTCCCCCCTCCGGCATCCACTGTCGGCGGGCGGCCGCGAAAAAGGTGCGTTTCCTATCGCTCGCCGTTTTGCCCGCCAATAGCAAGCGGAAGCTGGGGGAATCTGCGGTGGCTTTTTCGCCTCGTTGTGCCGTGTCATCTCCTCCTCCTCCTCCTGCCGATGATGATGCTGCTGATGCCGAGATCCATCCTCATCACTGCTGCAGACGCAGCCCCGAGAGGGAAGAAACAAGGAGCTCAACCCAGAGTGATGGCGCCTCGTCGTGGGGTCACCAGAGTATATATTGAGAAGAGATTGGGAGTAGGAGGGGGAAATGCATCAAGCCTGCAAGACATGCACAGGAAGGAGCTCCAGGCAAGGACAAGGGACCAGCTCCAGACATTGGAGTTATCTACGTCTTTGTACGACACGGCGTGGGTGGCCATGGTGCCACTGCGGGGTTCCCGTCAGCATCCGTGTTTCCCACAATGCGTGGAGTGGATATTACAAAACCAGCAGGATGATGGATCTTGGGGTACAAGAGGATTCGGCGTGGCGGTCACAAGAGATGTTCTGTCGTCTACGTTGGCGTGTGTTCTTGCACTCAAGAGATGGAATGTTGGGCAGGAGCACATCAGGAGAGGACTAGATTTTATTGGAAGGAATTTCTCCATTGCCATGGATGAGCAGATTGCTGCTCCTGTTGGTTTCAACATCACTTTTCCTGGTATGCTTAGCCTTGCCATGGGGATGGATTTAGAATTCCCTGTCAGACAGACGGATGTTGATAGACTTCTTCACCTCCGGGAGATAGAACTGGAAAGAGAGGCTGGAGACCATTCTTATGGAAGAAAGGCATATATGGCTTATGTCACAGAAGGATTAGGAAACCTGTTGGAGTGGGATGAGATTATGATGTTCCAGAGGAAGAATGGATCATTTTTCAACTGTCCTTCCACAACTGCTGCCACATTAGTCAACCACTATAACGATAAAGCCCTCCAGTACTTAAATTGTCTGGTTAGTAAATTTGGCAGTGCAGTACCAACAGTGTATCCACTAAACATATATTGTCAGCTTTCATGGGTGGATGCACTTGAAAAGATGGGAATTTCTCAGTATTTTGTCAGTGAGATAAAGAGCATCCTAGACACAACATACGTTTCATGGTTAGAAAGAGATGAGGAAATTATGCTGGACATAACAACATGTGCAATGGCTTTTCGCCTGTTAAGGATGAATGGGTATCATGTTTCCTCAGTCGAGTTATCTCCTGTTGCTGAAGCTTCCAGTTTCCGTGAATCACTTCAAGGATATTTAAATGATAAGAAATCTCTAATCGAATTATACAAGGCTTCAAAAGTCAGTAAATCAGAAAATGAATCAATCTTAGATAGCATAGGCTCTTGGTCAGGTAGCTTATTGAAGGAAAGTGTGTGCTCTAATGGGGTGAAAAAAGCTCCAATCTTTGAAGAGATGAAGTATGCTCTTAAGTTTCCCTTCTACACCACACTGGACCGTCTAGATCACAAGAGGAACATTGAACGTTTTGATGCAAAGGATTCCCAGATGTTAAAGACGGAATACTTGCTTCCTCATGCCAATCAAGATATTCTAGCTTTGGCTGTTGAAGATTTCAGTAGTTCTCAATCTATATACCAGGATGAACTTAATTATCTTGAGTGTTGGGTGAAAGATGAAAAGCTCGATCAGCTGCCATTTGCACGCCAGAAGTTGACATATTGCTACCTTTCTGCTGCTGCTACCATATTCCCCCGTGAATTGTCTGAAGCCCGCATTGCATGGGCTAAAAATGGTGTACTGACAACTGTTGTTGATGACTTCTTTGATCTTGGGGGATCAAAAGAAGAACTAGAAAACCTCATTGCTTTAGTTGAGAAGTGGGATGGACATCAAGAGGAGTTCTACTCAGAACAAGTAAGAATAGTTTTTTCTGCTATTTATACTACAGTGAACCAGCTTGGAGCAAAGGCTTCTGCATTACAAGGCCGTGATGTTACAAAACACCTAACAGAAATATGGTTATGTCTGATGAGGTCTATGATGACCGAAGCTGAATGGCAGAGGACAAAATATGTGCCGACAATGGAAGAATATATGGCAAATGCTGTTGTCTCATTTGCACTGGGACCTATTGTGCTCCCGACTCTGTATTTCGTAGGACCGAAGCTCCAAGAGGATGTCGTCAGGGATCATGAGTACAATGAATTATTTAGACTGATGAGCACTTGTGGGCGTCTCCTGAATGACAGCCAAGGCTTTGAGAGGGAGAGCCTGGAGGGAAAGCTGAACAGTGTCTCACTGCTTGTTCATCACAGTGGTGGTTCTATCTCCATAGACGAGGCTAAAATGAAAGCCCAGAAATCCATAGACACTTCCAGGAGGAACTTGTTAAGATTGGTCCTTGGAGAACAGGGTGCTGTTCCTAGGCCATGCAAGCAGCTGTTCTGGAAGATGTGCAAGATTGTTCACATGTTCTACTCTCGGACTGATGGGTTTAGCTCGCCGAAGGAAATGGTTAGTGCAGTGAATGCAGTCGTCAAGGAGCCACTTAAACTCAAAGTGAGTGATCCATATGGCTCTATTTTGTCGGGCAATTGAGTGCTTCTCCGTTCTGTTTTATCAGGGATATCAGCAACGAGCTTTATACAGGTTGATATTTCTTTTCTTTTTCTTTACGATAAGGGTTTAAATCCTAGTACCCACGATTATAGCTGCTGTGTGCTTTAAGTATAATAAATTTTACACTCTTACCATTTTTTTTTAATGTAAATGTTGGTATATATTGGTACCTGACATAATCAGAAGCACCAAATTATACA
CDS Sequence
- >LOC_Os04g52230.1
ATGATGATGCTGCTGATGCCGAGATCCATCCTCATCACTGCTGCAGACGCAGCCCCGAGAGGGAAGAAACAAGGAGCTCAACCCAGAGTGATGGCGCCTCGTCGTGGGGTCACCAGAGTATATATTGAGAAGAGATTGGGAGTAGGAGGGGGAAATGCATCAAGCCTGCAAGACATGCACAGGAAGGAGCTCCAGGCAAGGACAAGGGACCAGCTCCAGACATTGGAGTTATCTACGTCTTTGTACGACACGGCGTGGGTGGCCATGGTGCCACTGCGGGGTTCCCGTCAGCATCCGTGTTTCCCACAATGCGTGGAGTGGATATTACAAAACCAGCAGGATGATGGATCTTGGGGTACAAGAGGATTCGGCGTGGCGGTCACAAGAGATGTTCTGTCGTCTACGTTGGCGTGTGTTCTTGCACTCAAGAGATGGAATGTTGGGCAGGAGCACATCAGGAGAGGACTAGATTTTATTGGAAGGAATTTCTCCATTGCCATGGATGAGCAGATTGCTGCTCCTGTTGGTTTCAACATCACTTTTCCTGGTATGCTTAGCCTTGCCATGGGGATGGATTTAGAATTCCCTGTCAGACAGACGGATGTTGATAGACTTCTTCACCTCCGGGAGATAGAACTGGAAAGAGAGGCTGGAGACCATTCTTATGGAAGAAAGGCATATATGGCTTATGTCACAGAAGGATTAGGAAACCTGTTGGAGTGGGATGAGATTATGATGTTCCAGAGGAAGAATGGATCATTTTTCAACTGTCCTTCCACAACTGCTGCCACATTAGTCAACCACTATAACGATAAAGCCCTCCAGTACTTAAATTGTCTGGTTAGTAAATTTGGCAGTGCAGTACCAACAGTGTATCCACTAAACATATATTGTCAGCTTTCATGGGTGGATGCACTTGAAAAGATGGGAATTTCTCAGTATTTTGTCAGTGAGATAAAGAGCATCCTAGACACAACATACGTTTCATGGTTAGAAAGAGATGAGGAAATTATGCTGGACATAACAACATGTGCAATGGCTTTTCGCCTGTTAAGGATGAATGGGTATCATGTTTCCTCAGTCGAGTTATCTCCTGTTGCTGAAGCTTCCAGTTTCCGTGAATCACTTCAAGGATATTTAAATGATAAGAAATCTCTAATCGAATTATACAAGGCTTCAAAAGTCAGTAAATCAGAAAATGAATCAATCTTAGATAGCATAGGCTCTTGGTCAGGTAGCTTATTGAAGGAAAGTGTGTGCTCTAATGGGGTGAAAAAAGCTCCAATCTTTGAAGAGATGAAGTATGCTCTTAAGTTTCCCTTCTACACCACACTGGACCGTCTAGATCACAAGAGGAACATTGAACGTTTTGATGCAAAGGATTCCCAGATGTTAAAGACGGAATACTTGCTTCCTCATGCCAATCAAGATATTCTAGCTTTGGCTGTTGAAGATTTCAGTAGTTCTCAATCTATATACCAGGATGAACTTAATTATCTTGAGTGTTGGGTGAAAGATGAAAAGCTCGATCAGCTGCCATTTGCACGCCAGAAGTTGACATATTGCTACCTTTCTGCTGCTGCTACCATATTCCCCCGTGAATTGTCTGAAGCCCGCATTGCATGGGCTAAAAATGGTGTACTGACAACTGTTGTTGATGACTTCTTTGATCTTGGGGGATCAAAAGAAGAACTAGAAAACCTCATTGCTTTAGTTGAGAAGTGGGATGGACATCAAGAGGAGTTCTACTCAGAACAAGTAAGAATAGTTTTTTCTGCTATTTATACTACAGTGAACCAGCTTGGAGCAAAGGCTTCTGCATTACAAGGCCGTGATGTTACAAAACACCTAACAGAAATATGGTTATGTCTGATGAGGTCTATGATGACCGAAGCTGAATGGCAGAGGACAAAATATGTGCCGACAATGGAAGAATATATGGCAAATGCTGTTGTCTCATTTGCACTGGGACCTATTGTGCTCCCGACTCTGTATTTCGTAGGACCGAAGCTCCAAGAGGATGTCGTCAGGGATCATGAGTACAATGAATTATTTAGACTGATGAGCACTTGTGGGCGTCTCCTGAATGACAGCCAAGGCTTTGAGAGGGAGAGCCTGGAGGGAAAGCTGAACAGTGTCTCACTGCTTGTTCATCACAGTGGTGGTTCTATCTCCATAGACGAGGCTAAAATGAAAGCCCAGAAATCCATAGACACTTCCAGGAGGAACTTGTTAAGATTGGTCCTTGGAGAACAGGGTGCTGTTCCTAGGCCATGCAAGCAGCTGTTCTGGAAGATGTGCAAGATTGTTCACATGTTCTACTCTCGGACTGATGGGTTTAGCTCGCCGAAGGAAATGGTTAGTGCAGTGAATGCAGTCGTCAAGGAGCCACTTAAACTCAAAGTGAGTGATCCATATGGCTCTATTTTGTCGGGCAATTGA
Protein Sequence
- >LOC_Os04g52230.1
MMMLLMPRSILITAADAAPRGKKQGAQPRVMAPRRGVTRVYIEKRLGVGGGNASSLQDMHRKELQARTRDQLQTLELSTSLYDTAWVAMVPLRGSRQHPCFPQCVEWILQNQQDDGSWGTRGFGVAVTRDVLSSTLACVLALKRWNVGQEHIRRGLDFIGRNFSIAMDEQIAAPVGFNITFPGMLSLAMGMDLEFPVRQTDVDRLLHLREIELEREAGDHSYGRKAYMAYVTEGLGNLLEWDEIMMFQRKNGSFFNCPSTTAATLVNHYNDKALQYLNCLVSKFGSAVPTVYPLNIYCQLSWVDALEKMGISQYFVSEIKSILDTTYVSWLERDEEIMLDITTCAMAFRLLRMNGYHVSSVELSPVAEASSFRESLQGYLNDKKSLIELYKASKVSKSENESILDSIGSWSGSLLKESVCSNGVKKAPIFEEMKYALKFPFYTTLDRLDHKRNIERFDAKDSQMLKTEYLLPHANQDILALAVEDFSSSQSIYQDELNYLECWVKDEKLDQLPFARQKLTYCYLSAAATIFPRELSEARIAWAKNGVLTTVVDDFFDLGGSKEELENLIALVEKWDGHQEEFYSEQVRIVFSAIYTTVNQLGAKASALQGRDVTKHLTEIWLCLMRSMMTEAEWQRTKYVPTMEEYMANAVVSFALGPIVLPTLYFVGPKLQEDVVRDHEYNELFRLMSTCGRLLNDSQGFERESLEGKLNSVSLLVHHSGGSISIDEAKMKAQKSIDTSRRNLLRLVLGEQGAVPRPCKQLFWKMCKIVHMFYSRTDGFSSPKEMVSAVNAVVKEPLKLKVSDPYGSILSGN*