Gene Details:
- MSU gene ID: LOC_Os04g49900
- RAPdb gene ID: Os04g0588700
- Gene Symbol: OsABCC7
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Transgenic rice plants expressing OsABCC7 Promoter-GUS (
-glucuronidase) suggest that the gene was predominantly expressed in the xylem parenchyma cells in the stele region of the primary and lateral roots. - Knockout of OsABCC7 in rice significantly decreased As concentration in the xylem sap and As concentration in the shoots, but had little effect on root As concentration.
- The C-type ATP-Binding Cassette Transporter OsABCC7 Is Involved in the Root-to-Shoot Translocation of Arsenic in Rice.
Function-related keywords:
- xylem , root , transporter , lateral-root , xylem-parenchyma
Literature:
- The C-type ATP-Binding Cassette Transporter OsABCC7 Is Involved in the Root-to-Shoot Translocation of Arsenic in Rice . DOI: 10.1093/pcp/pcz054 ; PMID: 31028396
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os04g49900.1
AGTCCCCCGTGCTAAGTTGTAAGCTGATTTACACTAATGTTACTGTTCAGCAGCTAAGGACAATCTCTAGTCGAAACAGTAGCTGAAGCCAACGGCTTCAACATGGTGTACAAAGAAACTGCAAATCAATCAGGGATCCAATTCACCTGCGGCACACAAGAACCATTTCCAGATGCTTCAAAAGAAGAAAATGTGAAAAACAGGAGGAAATCTTCTTATGGAGAGGCAACTATTTCACAACATTTCACTTTCTCTTGGATGAATGGTCTTCTTGCTAAAGGTGCCAATAAGCCTTTGAATGAGGATGACATACCAGATGTTGGTGAGGAGGAAAGTGCCCAACACATCTCCAGAATATTCAGTAATATCATTGTGAAAGGGAATTTTCCTCTGACAGTTTCATCGATTTGTAAAGCAGCCTTCCTTCTCATTTGGAAGAAGGCGGCACTCAATGCAACCTTTGGAGTCCTAAGTGTAGTCGCCTCCTTTGTGGGGGCATACTTAATCAAGGACTTCGTGGGCTATCTAAGTGGAGATAATGGATTTGAAAGAGGCTACTCTCTTGTTCTTGTATTTGTAGGTGCGAAGGCTATTGAAACTCTTGCTTACAGACAATGGTTCTTTGGAAGTCTACAGGTTTATTTGCGCCTAAGAACATCTCTGATATCTCAGGTATACCAAAAGGTCCTTTATTTATCAAGCCAGTCAAGGCAGAAACATACCTCAGGGGAGATAATTAACTATGTGAGTGTTGACATCGAGAGGATTGTTAATGTTGCATGGTATGTGAACATGGTCTTCATGATGCCTATACAGATTACACTAGCAACTTATATTCTTTGGAAAAATCTTGGTCTGGGTTCTTTAGCTGGAATAGCAACAACAGCCATAATAATGCTTTGCAATATTCCTTTTACAAGAATCCAGAAAAGATTGCACGCAGGAATTATGAAAGCAAAAGATGACAGAATGGACATGACATCTGAAGTTATAAGAAGCATGAAGATCTTAAAACTTCAAGCTTGGGATATCCAATACCTTAGGAAATTGGAATATTTGAGGAAAGGAGAACATTTGTGGTTGTGGGAATTTCTAAGACTAAAAGCACTACTAGCATTTATGTTCTGGGGAGCACCCGCTGTCATATCAATCATGACATTTGCTTCATGCATTCTGATGGGAATCCCTCTAACAGCTGGAAGAGTGTTGTCCACACTAGCAACTGTGAATATACTGAAGGAGCCTATCTTTAGTCTACCAGAATTGCTTACTGCCTTTGCACAGGGGAAGATCTCAGCTGACAGAATAGTGTCATATCTCCAAGAAGAAGAAATAAGATCTGATGCAATTGAGGAAGTAGCAATAGACGAAAATGAATTTTCTGCAGAGATTGATCAGGGAGCATTCAGTTGGAAAACTGATGCAAAAATCCCAACACTTCAAGATATACATGTAAAGATACACAAAGGGATGAAAGTGGCAGTATGTGGAGCTGTTGGGAGTGGAAAATCTAGCCTGTTGTCATGTGTACTTGGAGAGATGCCAAAAGTGCAAGGAACGGTTAAGGTCTTTGGAACCAAAGCATATGTTCCACAGTCGTCATGGATACTTTCTGGGACTATTAGAGAAAACATTCTCTTTGGGAGCCCATTTGAAACTGATAGGTATGAGCGGACAATTGAAGCATGTGCCTTGGTTAAAGACATCGGAGTTTTCTCGGATGGTGATATGACAGATATAGGAGAACGGGGAACGACTATGAGTGGGGGACAAAAGCAACGGATTCAAATAGCAAGAGCAGTTTACAAGGATGCTGATGTCTACCTGTTTGATGATCCTTTCAGTGCTGTAGACCCTCAAACTGGGAGGCATCTATACAAGAAATGCCTGATGGGGGTCCTAAGGGATAAAACTGTGTTATACGTCACGCACCAAGTTGAATTTCTAGTTGATGCAGACCTTATTATGGTGATGCAAAATGGAAGGATAGCACAAGCAGGGAAATTTCAAGAACTCCAACAGAACATGGCTTTTGGAGTTATCTTTGGGGCTCACTTTTGTGCCGTCGAACAAGTTTGTAACGCAAAAGGCACAAGCATATATTTGTCAAAGCATCATGCAGAATCAGAAAAGGTACCAAGCATCAATGAGTCCGATGCAGAAAAGGAAATCAGCAGCAAATGGCAAAACACAAATATGATAAATTGCAGACAAGAAGTATTTAGAGATAACACTGAAGAAGGGAAATTGCTGCAGGGTGAAGAAAGAGAGAATGGATACATTAGCAAGCAAGTGTATTGGTCATACCTCACAGCTGCTCGAGGTGGTCTTTTCATTCCTATGATAATTGCAGCACAATGCTTCTTTCAGATATTTGAAGTGGGAAGCAACTATTGGATGGCATCAGCTTGCCATCCACGAACTGGAAGCAAATCAAAAATGGAATCCACCCAGTTCATGGTATATGTATTTATATCAGTTGGCAGCGCCTTGTGTATCTTGATTCGAGCAGTTCTTGTAGCTGTAACCGGCCTCCTCACATCAGAAAAATTGTTCAAGAGCATGATGCATTGCATCTTTCATGCTCCTATGTCTTTCTTTGACTCGACACCTACAGGGCGAATCTTAAACAGGGCTTCGATTGATCAAAGTGTGCTAGATTTGGAGACAGCGTCAACATTAAGTGAGAGCACATTTTCAGTGATGCAGTTTCTAGGAACAATACTAATCATATCATATGTTTCCTGGCCAGTTCTCATTATTTTTATTCCATCAATATTGATTTGCATCAGGTATCAGAGATATTACAGTCTAACAGCAACAGAATTAGCTCGCCTATCAGGAATTCAAAAGGCTCCAATTCTTCATCATTTTGGGGAAACTTTCTATGGAGCTGCAATAATTCGAGCATTTCGCCAAGAAGACCGGTTCTACAGATCAAATCTGAGTCTACTTGACAATCATTCAAGACCATGGTTTCACTTGATGGCTGCAGTAGAATGGCTCTCTTTCAGAATGAATTTGTTATGCAACTTTGTCTTTGGGTTCTCGTTGGTTTTGCTTGTGCGTCTTCCACAAGGTTTTGTTAATCCAAGCATTGGTGGGCTGGTAGTGATGTATGCATGGAATTTGAATACACAATTATCAGAAGCCACCCGGAATATAAGTCGTGCAGAAGCAAACATGATATCAGTTGAAAGAATATTACAGTACACAAAGCTTCCAAGTGAAGCCCCAACCATAACCGAGGGTAGCAAGCCACCAATGGCATGGCCAGAGTTTGGCATGATAAGCATAAGCAACTTAGAGGTCAGATATGCAGAACATCTCCCTTCAGTATTAAAAAACATAACTTGTGTGATTCCAGCTGAGAAAACAGTAGGTATTGTTGGACGCACAGGTAGTGGGAAGTCAACCTTAGTACAAGTACTTTTTCGGATTGTTGAGCCAAGAGAAGGGACCATCAAGATTGACAGCATCGACATCTGCAAAATTGGACTTCATGATCTGAGATCGAGAATATGTATTCTCCCACAGGATCCGGTGATGTTCGATGGTACAATCAGAGGAAATCTTGATCCCATGAACGAGTACCCAGATAGTAGGATATGGGAGGTAGTAGACAAGTGTCAGCTTGGCAATGTGGTGCGCTCGACTGAGAAAAAGCTGGATGAAATAGTAATTGAAAATGGGGACAACTGGAGCATGGGACAGCGACAACTATTTTGTTTAGGCAGAATTCTCCTGAGGAAGAGCAAGATACTAGTCCTTGATGAGGCAACTGCTTCAGTTGACTCTGCTACAGACCGGATTATTCAAGAGATAATTCGTCAAGAATTCAAAGATTGCACAGTGCTTGCAATTGCCCATAGGATGAACACTGTTATTGATAGTGACCTTATTCTTGTTCTTGGTGAAGGTAGTATTTTAGAATACGACACCCCCACCAAACTGCTCCAGAGAGAGGACTCTACATTCTCTAAGCTAACCAAAGAGTACTCACAACAATCGCAGCACTTCAAGTCTTCAACGGCAATGCACAGGATGGGTAGCTACTAATTTTCCTGAAGACATACTACATTCTACATGGCTATATTCCCCACGACACACCTGAAGTATCCGCGCCACAGCAACTCAGCAAGGGGCAGGGAATTGCTTCGTAGTCCAAGTAAAATTTTCTAAATGTTGCATGTAAAACCTATGAATAGCAAAACAGCGTAAATGATTAATTTACAGAAAAATGGCACT
CDS Sequence
- >LOC_Os04g49900.1
ATGGTGTACAAAGAAACTGCAAATCAATCAGGGATCCAATTCACCTGCGGCACACAAGAACCATTTCCAGATGCTTCAAAAGAAGAAAATGTGAAAAACAGGAGGAAATCTTCTTATGGAGAGGCAACTATTTCACAACATTTCACTTTCTCTTGGATGAATGGTCTTCTTGCTAAAGGTGCCAATAAGCCTTTGAATGAGGATGACATACCAGATGTTGGTGAGGAGGAAAGTGCCCAACACATCTCCAGAATATTCAGTAATATCATTGTGAAAGGGAATTTTCCTCTGACAGTTTCATCGATTTGTAAAGCAGCCTTCCTTCTCATTTGGAAGAAGGCGGCACTCAATGCAACCTTTGGAGTCCTAAGTGTAGTCGCCTCCTTTGTGGGGGCATACTTAATCAAGGACTTCGTGGGCTATCTAAGTGGAGATAATGGATTTGAAAGAGGCTACTCTCTTGTTCTTGTATTTGTAGGTGCGAAGGCTATTGAAACTCTTGCTTACAGACAATGGTTCTTTGGAAGTCTACAGGTTTATTTGCGCCTAAGAACATCTCTGATATCTCAGGTATACCAAAAGGTCCTTTATTTATCAAGCCAGTCAAGGCAGAAACATACCTCAGGGGAGATAATTAACTATGTGAGTGTTGACATCGAGAGGATTGTTAATGTTGCATGGTATGTGAACATGGTCTTCATGATGCCTATACAGATTACACTAGCAACTTATATTCTTTGGAAAAATCTTGGTCTGGGTTCTTTAGCTGGAATAGCAACAACAGCCATAATAATGCTTTGCAATATTCCTTTTACAAGAATCCAGAAAAGATTGCACGCAGGAATTATGAAAGCAAAAGATGACAGAATGGACATGACATCTGAAGTTATAAGAAGCATGAAGATCTTAAAACTTCAAGCTTGGGATATCCAATACCTTAGGAAATTGGAATATTTGAGGAAAGGAGAACATTTGTGGTTGTGGGAATTTCTAAGACTAAAAGCACTACTAGCATTTATGTTCTGGGGAGCACCCGCTGTCATATCAATCATGACATTTGCTTCATGCATTCTGATGGGAATCCCTCTAACAGCTGGAAGAGTGTTGTCCACACTAGCAACTGTGAATATACTGAAGGAGCCTATCTTTAGTCTACCAGAATTGCTTACTGCCTTTGCACAGGGGAAGATCTCAGCTGACAGAATAGTGTCATATCTCCAAGAAGAAGAAATAAGATCTGATGCAATTGAGGAAGTAGCAATAGACGAAAATGAATTTTCTGCAGAGATTGATCAGGGAGCATTCAGTTGGAAAACTGATGCAAAAATCCCAACACTTCAAGATATACATGTAAAGATACACAAAGGGATGAAAGTGGCAGTATGTGGAGCTGTTGGGAGTGGAAAATCTAGCCTGTTGTCATGTGTACTTGGAGAGATGCCAAAAGTGCAAGGAACGGTTAAGGTCTTTGGAACCAAAGCATATGTTCCACAGTCGTCATGGATACTTTCTGGGACTATTAGAGAAAACATTCTCTTTGGGAGCCCATTTGAAACTGATAGGTATGAGCGGACAATTGAAGCATGTGCCTTGGTTAAAGACATCGGAGTTTTCTCGGATGGTGATATGACAGATATAGGAGAACGGGGAACGACTATGAGTGGGGGACAAAAGCAACGGATTCAAATAGCAAGAGCAGTTTACAAGGATGCTGATGTCTACCTGTTTGATGATCCTTTCAGTGCTGTAGACCCTCAAACTGGGAGGCATCTATACAAGAAATGCCTGATGGGGGTCCTAAGGGATAAAACTGTGTTATACGTCACGCACCAAGTTGAATTTCTAGTTGATGCAGACCTTATTATGGTGATGCAAAATGGAAGGATAGCACAAGCAGGGAAATTTCAAGAACTCCAACAGAACATGGCTTTTGGAGTTATCTTTGGGGCTCACTTTTGTGCCGTCGAACAAGTTTGTAACGCAAAAGGCACAAGCATATATTTGTCAAAGCATCATGCAGAATCAGAAAAGGTACCAAGCATCAATGAGTCCGATGCAGAAAAGGAAATCAGCAGCAAATGGCAAAACACAAATATGATAAATTGCAGACAAGAAGTATTTAGAGATAACACTGAAGAAGGGAAATTGCTGCAGGGTGAAGAAAGAGAGAATGGATACATTAGCAAGCAAGTGTATTGGTCATACCTCACAGCTGCTCGAGGTGGTCTTTTCATTCCTATGATAATTGCAGCACAATGCTTCTTTCAGATATTTGAAGTGGGAAGCAACTATTGGATGGCATCAGCTTGCCATCCACGAACTGGAAGCAAATCAAAAATGGAATCCACCCAGTTCATGGTATATGTATTTATATCAGTTGGCAGCGCCTTGTGTATCTTGATTCGAGCAGTTCTTGTAGCTGTAACCGGCCTCCTCACATCAGAAAAATTGTTCAAGAGCATGATGCATTGCATCTTTCATGCTCCTATGTCTTTCTTTGACTCGACACCTACAGGGCGAATCTTAAACAGGGCTTCGATTGATCAAAGTGTGCTAGATTTGGAGACAGCGTCAACATTAAGTGAGAGCACATTTTCAGTGATGCAGTTTCTAGGAACAATACTAATCATATCATATGTTTCCTGGCCAGTTCTCATTATTTTTATTCCATCAATATTGATTTGCATCAGGTATCAGAGATATTACAGTCTAACAGCAACAGAATTAGCTCGCCTATCAGGAATTCAAAAGGCTCCAATTCTTCATCATTTTGGGGAAACTTTCTATGGAGCTGCAATAATTCGAGCATTTCGCCAAGAAGACCGGTTCTACAGATCAAATCTGAGTCTACTTGACAATCATTCAAGACCATGGTTTCACTTGATGGCTGCAGTAGAATGGCTCTCTTTCAGAATGAATTTGTTATGCAACTTTGTCTTTGGGTTCTCGTTGGTTTTGCTTGTGCGTCTTCCACAAGGTTTTGTTAATCCAAGCATTGGTGGGCTGGTAGTGATGTATGCATGGAATTTGAATACACAATTATCAGAAGCCACCCGGAATATAAGTCGTGCAGAAGCAAACATGATATCAGTTGAAAGAATATTACAGTACACAAAGCTTCCAAGTGAAGCCCCAACCATAACCGAGGGTAGCAAGCCACCAATGGCATGGCCAGAGTTTGGCATGATAAGCATAAGCAACTTAGAGGTCAGATATGCAGAACATCTCCCTTCAGTATTAAAAAACATAACTTGTGTGATTCCAGCTGAGAAAACAGTAGGTATTGTTGGACGCACAGGTAGTGGGAAGTCAACCTTAGTACAAGTACTTTTTCGGATTGTTGAGCCAAGAGAAGGGACCATCAAGATTGACAGCATCGACATCTGCAAAATTGGACTTCATGATCTGAGATCGAGAATATGTATTCTCCCACAGGATCCGGTGATGTTCGATGGTACAATCAGAGGAAATCTTGATCCCATGAACGAGTACCCAGATAGTAGGATATGGGAGGTAGTAGACAAGTGTCAGCTTGGCAATGTGGTGCGCTCGACTGAGAAAAAGCTGGATGAAATAGTAATTGAAAATGGGGACAACTGGAGCATGGGACAGCGACAACTATTTTGTTTAGGCAGAATTCTCCTGAGGAAGAGCAAGATACTAGTCCTTGATGAGGCAACTGCTTCAGTTGACTCTGCTACAGACCGGATTATTCAAGAGATAATTCGTCAAGAATTCAAAGATTGCACAGTGCTTGCAATTGCCCATAGGATGAACACTGTTATTGATAGTGACCTTATTCTTGTTCTTGGTGAAGGTAGTATTTTAGAATACGACACCCCCACCAAACTGCTCCAGAGAGAGGACTCTACATTCTCTAAGCTAACCAAAGAGTACTCACAACAATCGCAGCACTTCAAGTCTTCAACGGCAATGCACAGGATGGGTAGCTACTAA
Protein Sequence
- >LOC_Os04g49900.1
MVYKETANQSGIQFTCGTQEPFPDASKEENVKNRRKSSYGEATISQHFTFSWMNGLLAKGANKPLNEDDIPDVGEEESAQHISRIFSNIIVKGNFPLTVSSICKAAFLLIWKKAALNATFGVLSVVASFVGAYLIKDFVGYLSGDNGFERGYSLVLVFVGAKAIETLAYRQWFFGSLQVYLRLRTSLISQVYQKVLYLSSQSRQKHTSGEIINYVSVDIERIVNVAWYVNMVFMMPIQITLATYILWKNLGLGSLAGIATTAIIMLCNIPFTRIQKRLHAGIMKAKDDRMDMTSEVIRSMKILKLQAWDIQYLRKLEYLRKGEHLWLWEFLRLKALLAFMFWGAPAVISIMTFASCILMGIPLTAGRVLSTLATVNILKEPIFSLPELLTAFAQGKISADRIVSYLQEEEIRSDAIEEVAIDENEFSAEIDQGAFSWKTDAKIPTLQDIHVKIHKGMKVAVCGAVGSGKSSLLSCVLGEMPKVQGTVKVFGTKAYVPQSSWILSGTIRENILFGSPFETDRYERTIEACALVKDIGVFSDGDMTDIGERGTTMSGGQKQRIQIARAVYKDADVYLFDDPFSAVDPQTGRHLYKKCLMGVLRDKTVLYVTHQVEFLVDADLIMVMQNGRIAQAGKFQELQQNMAFGVIFGAHFCAVEQVCNAKGTSIYLSKHHAESEKVPSINESDAEKEISSKWQNTNMINCRQEVFRDNTEEGKLLQGEERENGYISKQVYWSYLTAARGGLFIPMIIAAQCFFQIFEVGSNYWMASACHPRTGSKSKMESTQFMVYVFISVGSALCILIRAVLVAVTGLLTSEKLFKSMMHCIFHAPMSFFDSTPTGRILNRASIDQSVLDLETASTLSESTFSVMQFLGTILIISYVSWPVLIIFIPSILICIRYQRYYSLTATELARLSGIQKAPILHHFGETFYGAAIIRAFRQEDRFYRSNLSLLDNHSRPWFHLMAAVEWLSFRMNLLCNFVFGFSLVLLVRLPQGFVNPSIGGLVVMYAWNLNTQLSEATRNISRAEANMISVERILQYTKLPSEAPTITEGSKPPMAWPEFGMISISNLEVRYAEHLPSVLKNITCVIPAEKTVGIVGRTGSGKSTLVQVLFRIVEPREGTIKIDSIDICKIGLHDLRSRICILPQDPVMFDGTIRGNLDPMNEYPDSRIWEVVDKCQLGNVVRSTEKKLDEIVIENGDNWSMGQRQLFCLGRILLRKSKILVLDEATASVDSATDRIIQEIIRQEFKDCTVLAIAHRMNTVIDSDLILVLGEGSILEYDTPTKLLQREDSTFSKLTKEYSQQSQHFKSSTAMHRMGSY*