Gene Details:
- MSU gene ID: LOC_Os04g48310
- RAPdb gene ID: Os04g0571800
- Gene Symbol: OsATL53
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- SCF OsFBK1 E3 ligase mediates jasmonic acid induced turn-over of OsATL53 and OsCCR14 to regulate rice anther and root lignification.
- These data show OsATL53 affects activity of OsCCR14, and their JA induced degradation by SCF OsFBK1 regulates lignification of rice anthers and roots.
- SCF OsFBK1 mediates turn-over of OsATL53 in cytoplasm and nucleus, while of OsCCR14 in the nucleus as validated by cell-free degradation assays.
- Biochemically, OsATL53 decreases enzymatic activity of OsCCR14 and sequesters it in the cytoplasm thereby regulating the lignification process.
- Knock-down rice transgenics of OsATL53 display increased lignin deposition in the anthers and roots vis-a-vis wild-type, while those of OsCCR14 have decreased lignin content.
Function-related keywords:
Literature:
- SCFOsFBK1 E3 ligase mediates jasmonic acid-induced turnover of OsATL53 and OsCCR14 to regulate lignification of rice anthers and roots . DOI: 10.1093/jxb/erac434 ; PMID: 36317370
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os04g48310.1
GATTTAAGGGATAAGGGAGGGACCTAAGTGAAAAAAGGCGGCAGTAGCGGTGAAAAAATGGCGACCAAAGTGCACGCCCGCCGCCTCTAGCGCCGACCGCCTCCCGTTCCCCTTCCCCACTCCGTCCCGGCAGCTACCTCCGCTTTCCACCACGCCGGCCGATCCGCCTCCCCAACCCTATCGCCGGCAGGCGCGCCACGCCAGGTTCCGGGCTCGGAGACACCGCACGCTCCGCCCGATGGGCACCCCCGGGCCGGAGCTCGCCGCTCTCGCGATTCGCCGCAGCGGCGGCCGCCTGTTCGAGCGGTAGGGAGGGACTCGTCTCCCCGCCTCTCCTTGTCGTGGACTCGTGGTAGCGGGGGTGGGAGGAGCCAGAGAGGCTGGGGGCAGGGAGGGAGGATGCTGGGGTCGGGCCTGAATCTCGTCAGCGCGGCGCTCGGCTTCGGCATGACCGCCGCCTTTGTCGCGTTCGTCTGCGCGCGGTTCGTCTGCTGCCGCGCCCGCCGCGCGGACGCTAGCGCGTCACGGCCACACCCCTCGCCGGTGGACTTCGACGCGGACTTCCCCTCGGATTTCGATCGCCCGATAGAGCATTCCCGCAGTGGGTTGGAACCATTGGCTGTTGCTGCAATTCCTACAATGAAGTATAACTGTGAAGCTTTCCATTCGGAAGATGACACCCAGTGCTCCATATGTTTAAGTGAATACAAGGAGAAGGACATTCTAAGAATTGTACCTATTTGTCATCATAACTTTCACCTTTACTGCTTAGATGCATGGTTGCTGAAGCAGACTACTTGCCCAATATGCCGGATCTCATTGAAAGAACTGCCTGATGGAAAATCGACCGTATCCTCTGCTCCTACCATGTCTCAACCCCCCACCCTCCCTGAGAGTTCTGTTAATCCAACATCTCATTTCCTCCCAGTTCATCAAGAACACAGAAGCCACCAGGATGGCCCAGATATGCCAGAATCTGTAGAGGTGGTTATTGAAATCCGACAGTGACTACGGCGGAATAGTGCAAGACAAGAATTTGCAGTTTAAATTCTTTGTACGCCCTTCATTGCATTGTTTGTCGCAGTTTCAAAATGTTTGAAGTCAAAATTATATGTGGTCCCTTTGCAAGTTGTAGACTAGAGAAGTCAGTCATACAATCCACATTATCATATGTTCTTTTTAATATATGTTGTATATTGCAAGCTAAGTAAAAATACCGATAAGATCTACTGATATAGGAGTAGAGCTTATTTACTGTTGAGTCCCTAATTTTTTTATGAGTGAATTTCAGCAGGGACACCTCTTACC
CDS Sequence
- >LOC_Os04g48310.1
ATGCTGGGGTCGGGCCTGAATCTCGTCAGCGCGGCGCTCGGCTTCGGCATGACCGCCGCCTTTGTCGCGTTCGTCTGCGCGCGGTTCGTCTGCTGCCGCGCCCGCCGCGCGGACGCTAGCGCGTCACGGCCACACCCCTCGCCGGTGGACTTCGACGCGGACTTCCCCTCGGATTTCGATCGCCCGATAGAGCATTCCCGCAGTGGGTTGGAACCATTGGCTGTTGCTGCAATTCCTACAATGAAGTATAACTGTGAAGCTTTCCATTCGGAAGATGACACCCAGTGCTCCATATGTTTAAGTGAATACAAGGAGAAGGACATTCTAAGAATTGTACCTATTTGTCATCATAACTTTCACCTTTACTGCTTAGATGCATGGTTGCTGAAGCAGACTACTTGCCCAATATGCCGGATCTCATTGAAAGAACTGCCTGATGGAAAATCGACCGTATCCTCTGCTCCTACCATGTCTCAACCCCCCACCCTCCCTGAGAGTTCTGTTAATCCAACATCTCATTTCCTCCCAGTTCATCAAGAACACAGAAGCCACCAGGATGGCCCAGATATGCCAGAATCTGTAGAGGTGGTTATTGAAATCCGACAGTGA
Protein Sequence
- >LOC_Os04g48310.1
MLGSGLNLVSAALGFGMTAAFVAFVCARFVCCRARRADASASRPHPSPVDFDADFPSDFDRPIEHSRSGLEPLAVAAIPTMKYNCEAFHSEDDTQCSICLSEYKEKDILRIVPICHHNFHLYCLDAWLLKQTTCPICRISLKELPDGKSTVSSAPTMSQPPTLPESSVNPTSHFLPVHQEHRSHQDGPDMPESVEVVIEIRQ*