Information report for OsHUB1;MIP1
Gene Details
|
|
Functional Descriptions
- The overexpression of MIP1 resulted in enhanced tillering and reduced plant height.
- In-depth characterization of the context of MIP1 and MOC1 would further our understanding of molecular regulatory mechanisms of rice tillering.
- Histone H2B Monoubiquitination Mediated by OsHUB1 and OsHUB2 Is Involved in Anther Development by Regulating Tapetum Degradation Related Genes in Rice.
- Here, we report OsHUB1 (Oryza sativa HISTONE MONO-UBIQUITINATION1) and OsHUB2, the homologues of Arabidopsis HUB1 and HUB2 proteins which function as E3 ligases in H2Bub1, are involved in late anther development in rice.
- Our studies suggest that histone H2B monoubiquitination, mediated by OsHUB1 and OsHUB2, is an important epigenetic modification that in concert with H3K4me2 modulates transcriptional regulation of anther development in rice.
- OsHUB1 and OsHub2 are down-regulated in the Spin6 RNAi plants and during the compatible interaction between rice and Magnaporthe oryzae.
- Our results suggest that OsHUB1 and OsHUB2 may be associated with the SPIN6/OsRac1 pathway in rice immunity.
Functional Keywords
- height , tillering , tiller , anther , development , tapetum , anther-development , magnaporthe-oryzae , immunity
Literature and News
- Identification and functional analysis of the MOC1 interacting protein 1 . DOI: 10.1016/S1673-8527(09)60026-6 ; PMID: 20171579
- Histone H2B Monoubiquitination Mediated by HISTONE MONOUBIQUITINATION1 and HISTONE MONOUBIQUITINATION2 Is Involved in Anther Development by Regulating Tapetum Degradation-Related Genes in Rice . DOI: 10.1104/pp.114.256578 ; PMID: 26143250
- OsHUB1 and OsHUB2 interact with SPIN6 and form homo- and hetero-dimers in rice . DOI: 10.1080/15592324.2015.1039212 ; PMID: 25955387
Gene Resources
- UniProt: Q7XU27
- EMBL: AK067475, AL663000, AP008210
- AlphaFoldDB: Q7XU27
- EnsemblPlants: Os04t0550400-01
- Gramene: Os04t0550400-01
- KEGG: dosa:Os04g0550400
- InterPro: IPR001841, IPR013083, IPR013956
- PANTHER: PTHR23163, PTHR23163:SF0
Sequences
cDNA Sequence
- >LOC_Os04g46450.1
CTCTCTCCTCTCTGCGCCGTTCGCCTAGCTCTCCTCCCCCCCTTCTCTTCTTTCTCCTCACGGTTCTCACCTCCTCCCCCCTTGACAGTGCACACGCCAAAACCACCGCTAACTCCCACCTCTCGCCCACACCTCCCTGATCCGATCCCTTCCCCCCTACAACCCTAGCCGAATTCCGCCTCCGCCGCGATCCGCTCGTCCCGCGCTCCAATTCCGTCCTTCATCCGCTCTTTGTTTTTTTTGCGATTGTTTTTTTGGGTGCGATTGGTTTGGTGATCCGCGTGTTAGGGTTCGGGAGTCGCCGGGGCGGGGGTTTGGGTGGTGGATTGGACCGGTAGGTGGCCGGGAGGGTTGGCCCTTGTGGTTTCGGGGTTTGGTTTCACCCGCCGCATGTGGAGAATCGGAGGACCTGGGAGAGGTTAGGGTTAGGGTTATGGGGAGCACGGGGGAGCCCGACCGGAAGCGGCGGCTCAGTAGCTCCGTCGCGCCCGGCGGCGGGGCCCCTGTTTCTCCTGCCAAGCGGCTGGCGGTTGCACCCACCTCCGAAGATAAGAAGCTCGATTTTACTGTACTCAAATACAAAAACCAAAAGCTCTCAGAGCAACTAGAAGCCCACAAGTTTGAGTATCGTGCTCTTGAAAATAAATTCGCTGGGCTAAAAGAGAAGCAGAGGACTCATAATGAGACACTTTCCTTGGTCAACAGTTCTTGGGAACAACTTGTGGCAGACCTGAAGTCAAGATCTTTTTGCAAAAGTGGATCTCCTAATTCCAGCCCTGGTTCAGGGCACAACAATGTACAAAAGGATGGTACTTGTGCACCCATAGAGAGGGACACTCTTAGAAGTCTTGTGGAATCTGGTGCAACTGAAAGTTCAGGTTGTTTGCCTGGTTGCCACTTGGGAAGTGATGCCCCTCCATTACATCTATCCACAGCTAATGCTCTTGGGGATATCTTTTTTCCATCAAGTGATCTTTTGCAAGCAAATGAGGAGTGTGCTTTGGCTGCTCTCACTAAATTACCAGAAAATGACCGCAGTAAGCAACTACAGAGTACTAGTAGCAACCTGTTGTCCAGCCTCAATAATGTCGTACAAGCATTAAGTAATCTTCAGTTGAAGCACAAGCAGTTAGCAGAGGATTATCAAAATCAAAGAGATTCCAGTGCCCGAAAAAGAGCTGAACATAGACGTCTAAAAGAGGAGTTGGCCAGTGCTGCTTCTGAGTTGGAAGAAACTAACTACAAACTGGCAGCACTTAAAGCTCAAAGAGATAATACACAAGGAGCTCGAATCCCATATCCTACATTAGGAAACAAAAATATGCCTGAAGATAAGGTCAGAGATAAACAAAGAGAGATGCAGGATCTTGAAGCTACTCACAAGGAATTATCGGAATTGATTTCAAAGCGGTTGGTGGAAATTAAGAGATTACATGAAGAGAGAATTGAAATTTTGAACAAAATAGCAACTTTTCAGAATATCTTGATGGATTTCAAGAGCATTCGTTCTTCAAAAGCTTTTCAGCTTGTTAATGATCGACTTCAGAAGTCACAAGCAGAATTGGATCACTACCAGACATTATTAGAGAAATTACAGGTTGATAAGGATAAGTTTGTGTGGCAAGAAAGGCAATTTAATTTGAAAGTTGATCTGGCTGAGATTCCTGAGAGGGTTTCTACATATTGTGAGTCTAGCATTGCTGATCTCAAGAAGGATATTCAGAAACTATGTGATGAAAAAAACATGCTTATTCTCAAACTTGAAGAGGCTTCAAGAGAACCTGGTCGGAATCAAGTTATTACAAAATTTAAAGCTTTAGTGTCATCGATACCAAGGGAAATGGGCGCGATGCAGAGTGAAATGACCAAACACAAGGAGGCTTCCTTGGAGTTGAATTCTTTGCGAGCAGAAGTCCATTCACTTTCTCGCATTCTGTCCAGAAAGGAACGTGATAATGAAGAAGCATCATGCAGATCTGCCCGTGCGGGATCTGATATAACACAACTTCAATCAGTGATTTCTGATCTGAAGCAAACTAATAAGGAGCTTAAGTTGTTCGCGGATATGTATAAGCGTGAATCCACTGATTCCAGGGAAATAATGGAATCCAGAGATAGGGAATTCCTTGAATGGGCTCATGTTCATGCCCTGAAATCATCTCTTGATGAAAGTAAGCTAGAGCAGCGTGTTAAGGCTGCCAATGAAGCTGAAGCAATCACACAGCAGAGGCTAGCAACTGCAGAAGCTGAGATTGCTGAATCAGGGCAGAAGCTTGGGACTTCTAGAAAGGATCTAGTCAGTTTATCCCATATGCTGAAGTCTAAACAGGAAGAATGTGAAGCTTACAGAGTGGAGGTCGAGTGTATCGGGCAAGCATATGAGGACATACAGGCACAAAACCAACAATTGCTACAGCAGATTATTGAAAGAGATGATGATAATACCAAGATTTTTATGGAGGGTGTTAAAGCAAAACAGACACAAGATGCTTTGCATTTGGAAACATATTCTTTGCGCAGAAACTTGCAGCAGGAAAGCTCTTTGATGGATCTGTACAACCAGAAAATTGTTTCCTTAGAAGATCAGCTTAAAATGTGGTCTGATCGGGTTGGGAAACTTCAAGAGGATGGATGGCAACAATCTGTTTCATTGAGTAATTACCAAAGAAAGCTGGTTGATGTGCACAGAGATGCTCAAAAGCTTATGCAATCATTGGATGGAATACAAGCGAATGTTGGAAGCAGTCGTTTGGAAGTCGCTGATCTGCTTATAGAACTTGAGAAAGAGAGGTTTAGTAAGAAGAGAATAGAGGATGATTTGGAGGTTATGTCAAGGAAAGCTAGCTCTCTTAGAGCCAAGGCACGTGAATCAGCAGTCCTGGAAAAGCTTCGTCATGAGGTCAAGGAGTATAGGGGGATATTGAAGTGTGGTATCTGCCATGATAGGCAGAAGGAGGTTGTGATTACCAAGTGCTACCATCTCTTCTGCAATCAGTGCATACAGAAGTCCCTTGGGAACCGACAGAGGAGATGTCCTTCATGTAGCTTGAGTTTTGGGGCTAATGACGTGAAACCTATCTACATATGAGGTTGTTAATTTCAAGATGGTATCGCAGGCATCTAGATCAAGCTACTTTGATGGTCATTACTTGGTCATATGGTTAGATGACCATGCGAGTTGAAGATATGACAAGTACTAGCTTGTACAACCAAACATATAAGCAGAATGTAGTAGCCTAATTTGGTTGGCTACATGGAATTGCAGGTGTCTGGCATTCGTGATGCTAATGTTTATTCCTGCTCCCTTGTATAGTTCGGGATTCTCCTGGAGTAGTTAAGTCGCTAGATTAGTCTGACTTTTGCTATATCCATTCTGTTCTTTTGGGGAAAAAACATCCAACAAAAGGGGTGGTGCTTCCCGCCATACTGAAACATTGTACCATATATAGCTTGTAGTTCCATTGTTGTAGCAGACAATAAGAATGTAGGTCTTACGGGTTTTCCAGATTGTACATTTCAGGAGATTGGCAATAGCGAAATTTCAGTTGGATGCAGTTTGTTTGGTCTTA
CDS Sequence
- >LOC_Os04g46450.1
ATGGGGAGCACGGGGGAGCCCGACCGGAAGCGGCGGCTCAGTAGCTCCGTCGCGCCCGGCGGCGGGGCCCCTGTTTCTCCTGCCAAGCGGCTGGCGGTTGCACCCACCTCCGAAGATAAGAAGCTCGATTTTACTGTACTCAAATACAAAAACCAAAAGCTCTCAGAGCAACTAGAAGCCCACAAGTTTGAGTATCGTGCTCTTGAAAATAAATTCGCTGGGCTAAAAGAGAAGCAGAGGACTCATAATGAGACACTTTCCTTGGTCAACAGTTCTTGGGAACAACTTGTGGCAGACCTGAAGTCAAGATCTTTTTGCAAAAGTGGATCTCCTAATTCCAGCCCTGGTTCAGGGCACAACAATGTACAAAAGGATGGTACTTGTGCACCCATAGAGAGGGACACTCTTAGAAGTCTTGTGGAATCTGGTGCAACTGAAAGTTCAGGTTGTTTGCCTGGTTGCCACTTGGGAAGTGATGCCCCTCCATTACATCTATCCACAGCTAATGCTCTTGGGGATATCTTTTTTCCATCAAGTGATCTTTTGCAAGCAAATGAGGAGTGTGCTTTGGCTGCTCTCACTAAATTACCAGAAAATGACCGCAGTAAGCAACTACAGAGTACTAGTAGCAACCTGTTGTCCAGCCTCAATAATGTCGTACAAGCATTAAGTAATCTTCAGTTGAAGCACAAGCAGTTAGCAGAGGATTATCAAAATCAAAGAGATTCCAGTGCCCGAAAAAGAGCTGAACATAGACGTCTAAAAGAGGAGTTGGCCAGTGCTGCTTCTGAGTTGGAAGAAACTAACTACAAACTGGCAGCACTTAAAGCTCAAAGAGATAATACACAAGGAGCTCGAATCCCATATCCTACATTAGGAAACAAAAATATGCCTGAAGATAAGGTCAGAGATAAACAAAGAGAGATGCAGGATCTTGAAGCTACTCACAAGGAATTATCGGAATTGATTTCAAAGCGGTTGGTGGAAATTAAGAGATTACATGAAGAGAGAATTGAAATTTTGAACAAAATAGCAACTTTTCAGAATATCTTGATGGATTTCAAGAGCATTCGTTCTTCAAAAGCTTTTCAGCTTGTTAATGATCGACTTCAGAAGTCACAAGCAGAATTGGATCACTACCAGACATTATTAGAGAAATTACAGGTTGATAAGGATAAGTTTGTGTGGCAAGAAAGGCAATTTAATTTGAAAGTTGATCTGGCTGAGATTCCTGAGAGGGTTTCTACATATTGTGAGTCTAGCATTGCTGATCTCAAGAAGGATATTCAGAAACTATGTGATGAAAAAAACATGCTTATTCTCAAACTTGAAGAGGCTTCAAGAGAACCTGGTCGGAATCAAGTTATTACAAAATTTAAAGCTTTAGTGTCATCGATACCAAGGGAAATGGGCGCGATGCAGAGTGAAATGACCAAACACAAGGAGGCTTCCTTGGAGTTGAATTCTTTGCGAGCAGAAGTCCATTCACTTTCTCGCATTCTGTCCAGAAAGGAACGTGATAATGAAGAAGCATCATGCAGATCTGCCCGTGCGGGATCTGATATAACACAACTTCAATCAGTGATTTCTGATCTGAAGCAAACTAATAAGGAGCTTAAGTTGTTCGCGGATATGTATAAGCGTGAATCCACTGATTCCAGGGAAATAATGGAATCCAGAGATAGGGAATTCCTTGAATGGGCTCATGTTCATGCCCTGAAATCATCTCTTGATGAAAGTAAGCTAGAGCAGCGTGTTAAGGCTGCCAATGAAGCTGAAGCAATCACACAGCAGAGGCTAGCAACTGCAGAAGCTGAGATTGCTGAATCAGGGCAGAAGCTTGGGACTTCTAGAAAGGATCTAGTCAGTTTATCCCATATGCTGAAGTCTAAACAGGAAGAATGTGAAGCTTACAGAGTGGAGGTCGAGTGTATCGGGCAAGCATATGAGGACATACAGGCACAAAACCAACAATTGCTACAGCAGATTATTGAAAGAGATGATGATAATACCAAGATTTTTATGGAGGGTGTTAAAGCAAAACAGACACAAGATGCTTTGCATTTGGAAACATATTCTTTGCGCAGAAACTTGCAGCAGGAAAGCTCTTTGATGGATCTGTACAACCAGAAAATTGTTTCCTTAGAAGATCAGCTTAAAATGTGGTCTGATCGGGTTGGGAAACTTCAAGAGGATGGATGGCAACAATCTGTTTCATTGAGTAATTACCAAAGAAAGCTGGTTGATGTGCACAGAGATGCTCAAAAGCTTATGCAATCATTGGATGGAATACAAGCGAATGTTGGAAGCAGTCGTTTGGAAGTCGCTGATCTGCTTATAGAACTTGAGAAAGAGAGGTTTAGTAAGAAGAGAATAGAGGATGATTTGGAGGTTATGTCAAGGAAAGCTAGCTCTCTTAGAGCCAAGGCACGTGAATCAGCAGTCCTGGAAAAGCTTCGTCATGAGGTCAAGGAGTATAGGGGGATATTGAAGTGTGGTATCTGCCATGATAGGCAGAAGGAGGTTGTGATTACCAAGTGCTACCATCTCTTCTGCAATCAGTGCATACAGAAGTCCCTTGGGAACCGACAGAGGAGATGTCCTTCATGTAGCTTGAGTTTTGGGGCTAATGACGTGAAACCTATCTACATATGA
Protein Sequence
- >LOC_Os04g46450.1
MGSTGEPDRKRRLSSSVAPGGGAPVSPAKRLAVAPTSEDKKLDFTVLKYKNQKLSEQLEAHKFEYRALENKFAGLKEKQRTHNETLSLVNSSWEQLVADLKSRSFCKSGSPNSSPGSGHNNVQKDGTCAPIERDTLRSLVESGATESSGCLPGCHLGSDAPPLHLSTANALGDIFFPSSDLLQANEECALAALTKLPENDRSKQLQSTSSNLLSSLNNVVQALSNLQLKHKQLAEDYQNQRDSSARKRAEHRRLKEELASAASELEETNYKLAALKAQRDNTQGARIPYPTLGNKNMPEDKVRDKQREMQDLEATHKELSELISKRLVEIKRLHEERIEILNKIATFQNILMDFKSIRSSKAFQLVNDRLQKSQAELDHYQTLLEKLQVDKDKFVWQERQFNLKVDLAEIPERVSTYCESSIADLKKDIQKLCDEKNMLILKLEEASREPGRNQVITKFKALVSSIPREMGAMQSEMTKHKEASLELNSLRAEVHSLSRILSRKERDNEEASCRSARAGSDITQLQSVISDLKQTNKELKLFADMYKRESTDSREIMESRDREFLEWAHVHALKSSLDESKLEQRVKAANEAEAITQQRLATAEAEIAESGQKLGTSRKDLVSLSHMLKSKQEECEAYRVEVECIGQAYEDIQAQNQQLLQQIIERDDDNTKIFMEGVKAKQTQDALHLETYSLRRNLQQESSLMDLYNQKIVSLEDQLKMWSDRVGKLQEDGWQQSVSLSNYQRKLVDVHRDAQKLMQSLDGIQANVGSSRLEVADLLIELEKERFSKKRIEDDLEVMSRKASSLRAKARESAVLEKLRHEVKEYRGILKCGICHDRQKEVVITKCYHLFCNQCIQKSLGNRQRRCPSCSLSFGANDVKPIYI*