Gene Details:
- MSU gene ID: LOC_Os04g45970
- RAPdb gene ID: Os04g0543900
- Gene Symbol: OsGDH2
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Real-time PCR analysis showed that OsIDHa and OsIDHc;1 transcripts, but not OsGDH1 and OsGDH2 transcripts, accumulated in a similar manner to NADH-GOGAT mRNA along the crown roots after the supply of different forms of inorganic nitrogen.
- Salt stress clearly up-regulated the expression of OsGDH2 and OsGDH3 in old leaves, while strongly down-regulated expression of OsGS2 and OsFd-GOGAT in old leaves.
Function-related keywords:
- crown-root , salt , root , crown , nitrogen , salt-stress
Literature:
- Effects of salt stress on ion balance and nitrogen metabolism of old and young leaves in rice (Oryza sativa L.) . DOI: 10.1186/1471-2229-12-194 ; PMID: 23082824
- Localization of NAD-isocitrate dehydrogenase and glutamate dehydrogenase in rice roots: candidates for providing carbon skeletons to NADH-glutamate synthase . DOI: 10.1093/pcp/pci188 ; PMID: 16120687
- Metabolomics data reveal a crucial role of cytosolic glutamine synthetase 1;1 in coordinating metabolic balance in rice . DOI: 10.1111/j.1365-313X.2011.04506.x ; PMID: 21255162
- Indeterminate domain 10 regulates ammonium-mediated gene expression in rice roots . DOI: 10.1111/nph.12075 ; PMID: 23278238
- Comparison of ion balance and nitrogen metabolism in old and young leaves of alkali-stressed rice plants . DOI: 10.1371/journal.pone.0037817 ; PMID: 22655071
Related News:
Gene Resources:
- NCBI ID: AB189166
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os04g45970.2
GCGTTCGAAATTTACAATCTTTGACCCGCTTCGTCCTCAATCTTCTTGCTTATACACAGTCATAATCCCTCGTACTAGAAATTACCGTGCAAAATTTCCCCACACACGTGCTGCTATGGTTCTAAATTTCTAATCGGCTCTGATGAGTCACCTTCCCAACAGATGAGAGAGGATTTTCTGGCTGAGTTTAGCAATTAGCACAGCTCTTTGATCCTATCTTTGCTTTCTTGCTCCGCCTACCTGGATGGATGGATCCCCCCTCCCTATTAATACAGCACGCTTCTTCCTCTTCCTCCTCACGATTCAAGCCAAACGCAGCCGGCCGACCTCCTCCCGTGCCTTCCTCCTCGATCCCCGGAGAGAGAAAAAAGGCTCCATCTTTTTTCCTCTTTCCGTTTTTGGGCGCGAACGCCTCGTCCCCCCCGGATCGATCTTGCTCGCGCGCGGTCCGTAGTCGCGTGCTCTGTTCGAAAGGCGAGTCCCTTTTTTTTTTTCTTCTCCGGCCGCGGGCGCTAATTTTCTTGGAGGGCGACGCGCCACCTTTGGCCCGGCCATGAACGCGCTCGCCGCCACCAGCCGTAACTTCCGGCAGGCCGCCAGGCTGCTCGGCCTCGACTCCAAGCTCGAGAAGAGCCTCCTGATCCCGTTCCGCGAGATCAAGGTGGAATGCACCATCCCCAAAGACGATGGAACCTTGGCGTCCTTCATTGGGTTCCGCGTGCAGCACGACAATGCCCGCGGGCCAATGAAAGGTGGCATTCGCTATCACCCTGAGGTTGATCCAGATGAAGTAAATGCACTTGCTCAACTAATGACATGGAAGACTGCTGTTGCAGCAATTCCATATGGTGGAGCAAAGGGTGGGATTGGATGCGCTCCTGGTGAATTAAGCACGAGTGAGCTGGAGCGTTTGACACGTGTATTTACACAGAAAATTCATGATCTTATTGGAGCTCATACTGACGTGCCAGCTCCTGACATGGGAACTAATTCACAGACCATGGCTTGGATTTTGGATGAGTACTCGAAATTCCATGGTCATTCACCGGCAGTTGTCACTGGGAAGCCAATAGATCTTGGTGGATCATTAGGTAGAGATGCTGCTACAGGAAGAGGTGTGATGTACGCTACTGAGGCTCTTTTGGCTGAACATGGAAAGTCCATTTCTGGATCAACCTTTGTTATCCAGGTCAGTCATAATTAATAATCGATTGATTTTTGCTATGCGGATTATTTCTAGGATGGTTGAAGGACAATACTCCATCCGTCCTAGAATATAAGAAGTTTTAGGCTTGGACACGGTTATTAAGAAAGTAGGTAGAAGTGAGAGGTGGATGGTCATAATTGGATGAGTAGTGGAGGTAGGTGGAAAAAGTGAATGGTGGAGTGCTGTTATTGGTTGGGAAGAGAATGTTGGTGGAGAAGTTGTTATATTTTGGGACAAATCCTGAGGGCTAAAAGTTGTTATATTTTGGTACGAAGGGAGTAACATGCATCATCATAACAGC - >LOC_Os04g45970.1
GCGTTCGAAATTTACAATCTTTGACCCGCTTCGTCCTCAATCTTCTTGCTTATACACAGTCATAATCCCTCGTACTAGAAATTACCGTGCAAAATTTCCCCACACACGTGCTGCTATGGTTCTAAATTTCTAATCGGCTCTGATGAGTCACCTTCCCAACAGATGAGAGAGGATTTTCTGGCTGAGTTTAGCAATTAGCACAGCTCTTTGATCCTATCTTTGCTTTCTTGCTCCGCCTACCTGGATGGATGGATCCCCCCTCCCTATTAATACAGCACGCTTCTTCCTCTTCCTCCTCACGATTCAAGCCAAACGCAGCCGGCCGACCTCCTCCCGTGCCTTCCTCCTCGATCCCCGGAGAGAGAAAAAAGGCTCCATCTTTTTTCCTCTTTCCGTTTTTGGGCGCGAACGCCTCGTCCCCCCCGGATCGATCTTGCTCGCGCGCGGTCCGTAGTCGCGTGCTCTGTTCGAAAGGCGAGTCCCTTTTTTTTTTTCTTCTCCGGCCGCGGGCGCTAATTTTCTTGGAGGGCGACGCGCCACCTTTGGCCCGGCCATGAACGCGCTCGCCGCCACCAGCCGTAACTTCCGGCAGGCCGCCAGGCTGCTCGGCCTCGACTCCAAGCTCGAGAAGAGCCTCCTGATCCCGTTCCGCGAGATCAAGGTGGAATGCACCATCCCCAAAGACGATGGAACCTTGGCGTCCTTCATTGGGTTCCGCGTGCAGCACGACAATGCCCGCGGGCCAATGAAAGGTGGCATTCGCTATCACCCTGAGGTTGATCCAGATGAAGTAAATGCACTTGCTCAACTAATGACATGGAAGACTGCTGTTGCAGCAATTCCATATGGTGGAGCAAAGGGTGGGATTGGATGCGCTCCTGGTGAATTAAGCACGAGTGAGCTGGAGCGTTTGACACGTGTATTTACACAGAAAATTCATGATCTTATTGGAGCTCATACTGACGTGCCAGCTCCTGACATGGGAACTAATTCACAGACCATGGCTTGGATTTTGGATGAGTACTCGAAATTCCATGGTCATTCACCGGCAGTTGTCACTGGGAAGCCAATAGATCTTGGTGGATCATTAGGTAGAGATGCTGCTACAGGAAGAGGTGTGATGTACGCTACTGAGGCTCTTTTGGCTGAACATGGAAAGTCCATTTCTGGATCAACCTTTGTTATCCAGGTCAGTCATAATTAATAATCGATTGATTTTTGCTATGCGGATTATTTCTAGGATGGTTGAAGGACAATACTCCATCCGTCCTAGAATATAAGAAGTTTTAGGCTTGGACACGGTTATTAAGAAAGTAGGTAGAAGTGAGAGGTGGATGGTCATAATTGGATGAGTAGTGGAGGTAGGTGGAAAAAGTGAATGGTGGAGTGCTGTTATTGGTTGGGAAGAGAATGTTGGTGGAGAAGTTGTTATATTTTGGGACAAATCCTGAGGGCTAAAAGTTGTTATATTTTGGTACGAAGGGAGTAACATGCATCATCATAACAGC
CDS Sequence
- >LOC_Os04g45970.2
ATGAACGCGCTCGCCGCCACCAGCCGTAACTTCCGGCAGGCCGCCAGGCTGCTCGGCCTCGACTCCAAGCTCGAGAAGAGCCTCCTGATCCCGTTCCGCGAGATCAAGGTGGAATGCACCATCCCCAAAGACGATGGAACCTTGGCGTCCTTCATTGGGTTCCGCGTGCAGCACGACAATGCCCGCGGGCCAATGAAAGGTGGCATTCGCTATCACCCTGAGGTTGATCCAGATGAAGTAAATGCACTTGCTCAACTAATGACATGGAAGACTGCTGTTGCAGCAATTCCATATGGTGGAGCAAAGGGTGGGATTGGATGCGCTCCTGGTGAATTAAGCACGAGTGAGCTGGAGCGTTTGACACGTGTATTTACACAGAAAATTCATGATCTTATTGGAGCTCATACTGACGTGCCAGCTCCTGACATGGGAACTAATTCACAGACCATGGCTTGGATTTTGGATGAGTACTCGAAATTCCATGGTCATTCACCGGCAGTTGTCACTGGGAAGCCAATAGATCTTGGTGGATCATTAGGTAGAGATGCTGCTACAGGAAGAGGTGTGATGTACGCTACTGAGGCTCTTTTGGCTGAACATGGAAAGTCCATTTCTGGATCAACCTTTGTTATCCAGGTCAGTCATAATTAA - >LOC_Os04g45970.1
ATGAACGCGCTCGCCGCCACCAGCCGTAACTTCCGGCAGGCCGCCAGGCTGCTCGGCCTCGACTCCAAGCTCGAGAAGAGCCTCCTGATCCCGTTCCGCGAGATCAAGGTGGAATGCACCATCCCCAAAGACGATGGAACCTTGGCGTCCTTCATTGGGTTCCGCGTGCAGCACGACAATGCCCGCGGGCCAATGAAAGGTGGCATTCGCTATCACCCTGAGGTTGATCCAGATGAAGTAAATGCACTTGCTCAACTAATGACATGGAAGACTGCTGTTGCAGCAATTCCATATGGTGGAGCAAAGGGTGGGATTGGATGCGCTCCTGGTGAATTAAGCACGAGTGAGCTGGAGCGTTTGACACGTGTATTTACACAGAAAATTCATGATCTTATTGGAGCTCATACTGACGTGCCAGCTCCTGACATGGGAACTAATTCACAGACCATGGCTTGGATTTTGGATGAGTACTCGAAATTCCATGGTCATTCACCGGCAGTTGTCACTGGGAAGCCAATAGATCTTGGTGGATCATTAGGTAGAGATGCTGCTACAGGAAGAGGTGTGATGTACGCTACTGAGGCTCTTTTGGCTGAACATGGAAAGTCCATTTCTGGATCAACCTTTGTTATCCAGGTCAGTCATAATTAA
Protein Sequence
- >LOC_Os04g45970.2
MNALAATSRNFRQAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFIGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAAIPYGGAKGGIGCAPGELSTSELERLTRVFTQKIHDLIGAHTDVPAPDMGTNSQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVMYATEALLAEHGKSISGSTFVIQVSHN* - >LOC_Os04g45970.1
MNALAATSRNFRQAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFIGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAAIPYGGAKGGIGCAPGELSTSELERLTRVFTQKIHDLIGAHTDVPAPDMGTNSQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVMYATEALLAEHGKSISGSTFVIQVSHN*