Gene Details:
- MSU gene ID: LOC_Os04g45960
- RAPdb gene ID: Os04g0543700
- Gene Symbol: OsSub42 OsSP2
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- We validated the stage-specificity of regulatory regions of three panicle-specific genes, OsAGO3, OsSub42, and RTS, and an early seed-specific gene, XYH, in transgenic rice.
Function-related keywords:
Literature:
- Expression dynamics of metabolic and regulatory components across stages of panicle and seed development in indica rice . DOI: 10.1007/s10142-012-0274-3 ; PMID: 22466020
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os04g45960.1
ATGCTTGCACTTATAAACGCATACCTTCAGGCATATAAGTTTCAAACTTCATACGATTGTTCAAGTGACACTATTGTCATGGCTTTTTGCAAACCATGTCTAGTATTCTATTCTGTTCTTACTTTTCTGATCCTAAATGGTGGTCCATCTCATGTACTTGCAAAGGTTTTTATGGTGGTGATGGAGGATGACCCAATCATTTCCCCCAAGTCAAGCCAAAAGAAAGTAATGAGAGGTGAGGAAGCTCAGAAGTACAAGGCAATGACCACAACGAAGCATGATATCTTCCTGGATTCATTTCTCCCAGCTGGATCTTACAAGAAGCTATACAGTTACACCCACCTTCTCAATGGCTTTGCTATCTATGCAAAATCTGAAAAGGCAATTAAAACTCTTAGTGGAGCAAAAGGAGTTAGACTCATCCAAGAAGATATAAAAATGGCCAAGATGACCACATACACTCCGAGGTACATTGGAGCTAATGTAGTCTGGCCGCTCCTCGGTGGTGCCGAGAAGGCTGGTGACGGAGTAGTCATTGGCATGGTAGATACTGGCATTGACCCCAGCAACCCAAGCTTTTTAAGCACATCGGACCAAGCAAAACCACCACCGGCCAGTTTCAAAGGAACATGTCAAACTGGCGAAAGATTTCCTCCAGATTCATGCAATGGTAAGATTGTTGGAGCTAGGTGGTTTGCACGTGCTGGTCAAGCAACTGGAGAGTTCAATGCTACAATGCACTATGCATCTCCTTACGATCCTGATGGCCATGGCAGCCACACAGCGTCCACTGCAGCTGGCAATTTTCATACGCCAGCAATATCAAAGGGCTACAACTTTGGGCATGCAAGTGGCGTAGCACCTGGAGCTCATCTTGCAATCTACAAAGCTGCCTATTCTTTTGGTGGATACATGTCAGATGTTATAGCTGCAGTTGACAAGGCTGTAGAAGATGGCGTCGATATTATCAGTCTTTCACTGGGACCAACTACTATTACATCTGGGCCAGCATCATTCCTCAATTTGCTCGAGACACAACTTCTCCTTGCCACCAAGGCTGGGATCTCAGTTGTTCAAGCAGTTGGCAATGGAGGCCCTGATGCAAACTCAGTAGTTTCGTTCAGCCCATGGATAACAAGTGTTGGGGCATCCACAACTGACAGGAAGTATAACAAATCAATTATAATTGGAAATGGGCAAGTCTTCTCTTGCGGCGGCCTATCACCATCGACACCAGGCGAGACCATGTACCCTCTAGCATTGGCTGATGATGTGTGCAACACGAATTCAACTGGTGGATCTTCCAACTGCCAAGATCCGGATGTCTTCATAAGATCTCTTGTCCAGGGGAAGGTGATTATTTGCATGTTTGTGTCGTCAAACTACTACGAAGGCGACTTCCTTGCTGGCATTGTCGATACGATTCAGAAAATTGGTGCTGCCGGAGTTATCATCACTGACCGTTCTTCGAGTGACTCCGACATTGAATATCATCCCACATTTCCGACGTCAATCCCTTCAGCCATAGTTGTGAACAGTGCTGATGCACAGGCTCTATTGGAGTACTACGACGACAACTTGGTCCGAGACAAGGAAGGAAGTGTCACCAAGTTCGGCGCAACCATCCGAATTCTGGATGGACGGCGAGCAATCTACACCAGGGAGGCGCCCGTCGTCGCCGAGTACTCGTCGAGGGGCCCGGACGTCGACGACATGCAGATGCAGGCGGCGGACGTGCTGAAGCCGAACGTCATGGCGCCGGGCCATCACATCTGGGGAGCCTGGAGCCCGACGAGCGACGCCATGGTCGAGTTCCAGGGCGAGAGCTACGCGATGCTGTCCGGCACGAGCATGGCCACCCCGCACGTCGCCGGTGTGGTGGCCCTGATCAGGCAGAGGCACCCCAAGTGGAGCCCCGCCATGGTCATGTCGGCGATCATGACCACCGCCGACGTCACCGACCGCTCCGGGAGGCCCCTGATGGCGCGGCGTGACGGGGGCGTCCTGGAGCGCGCGACGCCGTTCGACATGGGCGCCGGGGCCATCAACGCGGCGCGCGCCGTCGACCCGGGCCTGGTGTTCGACGCCGGGTACCGGGACTACCTCCAGTTCCTGTGCGCCGTGCCTGGCGTGGACGACGCCGCGGTGCTCCGCGCGGTGGGCGTGCCCTGCCCGCCGTCGCGGGCGCGGTGGTGCTCGGACCTGAACGCGCCGAGCGTGACGGTGGCGAGCCTGGTGGGGTCGCGGCGGGTGGACCGGCGGGTGACGAGCGTGGGCGCGGAGAACGAGACGTACATGGCGCACGTGCAGGCGCCCGACGGCGTGGCGGTGCGCGTGTCGCCGGACACGTTCGCCGTCGCCCCCGGCGCGACGGCCACGCTGAGGATCGTGCTCAACACCACCGCGCCGGGGAACACCTTCAGCTTCGGCGAGGTGGTCCTCAGGGGCGACAAGAAGCACACCGTGAGGATCCCCCTCGCTGTCTTCCCCGCCGCGGCGTTGAGCCCGTGAAGCCCCGAACAGGGATAGTCCTGGTATATACAAATATTACTTACGTATACGTATGCGAGCGGATGGAGTTGTACGATGAATGAATAACATGTATACATACACTATACTCGTGTTCGAGCAAACAAGAATACGAGCCATGTATCGTATAATCGGATATTATGGGCCGCAACGGACCAACCGGACTGTGCCCCTGCTGGGTTATTCCTCTAGTTGGGCCGGAGCACGGAGGAGAGCTGGTCAGCCATAATGGGCTTTCGTTCTGATGCAAAGCAACGGCCTCTGCTAACTTCGGCTTGTCGAGCATCTCTAGCAGCTTTTGCCAGATGCCAGACTACCATGGACGGGTTTGACTGTGGCTTCTCTTTTTAATTTTTTTGATTTGATGTGTCCAGTGATCTAATGATTGTTTAGCATTCTTAACGATGATATTAACTAGAAGCATACGCCATTTACGGATA
CDS Sequence
- >LOC_Os04g45960.1
ATGCTTGCACTTATAAACGCATACCTTCAGGCATATAAGTTTCAAACTTCATACGATTGTTCAAGTGACACTATTGTCATGGCTTTTTGCAAACCATGTCTAGTATTCTATTCTGTTCTTACTTTTCTGATCCTAAATGGTGGTCCATCTCATGTACTTGCAAAGGTTTTTATGGTGGTGATGGAGGATGACCCAATCATTTCCCCCAAGTCAAGCCAAAAGAAAGTAATGAGAGGTGAGGAAGCTCAGAAGTACAAGGCAATGACCACAACGAAGCATGATATCTTCCTGGATTCATTTCTCCCAGCTGGATCTTACAAGAAGCTATACAGTTACACCCACCTTCTCAATGGCTTTGCTATCTATGCAAAATCTGAAAAGGCAATTAAAACTCTTAGTGGAGCAAAAGGAGTTAGACTCATCCAAGAAGATATAAAAATGGCCAAGATGACCACATACACTCCGAGGTACATTGGAGCTAATGTAGTCTGGCCGCTCCTCGGTGGTGCCGAGAAGGCTGGTGACGGAGTAGTCATTGGCATGGTAGATACTGGCATTGACCCCAGCAACCCAAGCTTTTTAAGCACATCGGACCAAGCAAAACCACCACCGGCCAGTTTCAAAGGAACATGTCAAACTGGCGAAAGATTTCCTCCAGATTCATGCAATGGTAAGATTGTTGGAGCTAGGTGGTTTGCACGTGCTGGTCAAGCAACTGGAGAGTTCAATGCTACAATGCACTATGCATCTCCTTACGATCCTGATGGCCATGGCAGCCACACAGCGTCCACTGCAGCTGGCAATTTTCATACGCCAGCAATATCAAAGGGCTACAACTTTGGGCATGCAAGTGGCGTAGCACCTGGAGCTCATCTTGCAATCTACAAAGCTGCCTATTCTTTTGGTGGATACATGTCAGATGTTATAGCTGCAGTTGACAAGGCTGTAGAAGATGGCGTCGATATTATCAGTCTTTCACTGGGACCAACTACTATTACATCTGGGCCAGCATCATTCCTCAATTTGCTCGAGACACAACTTCTCCTTGCCACCAAGGCTGGGATCTCAGTTGTTCAAGCAGTTGGCAATGGAGGCCCTGATGCAAACTCAGTAGTTTCGTTCAGCCCATGGATAACAAGTGTTGGGGCATCCACAACTGACAGGAAGTATAACAAATCAATTATAATTGGAAATGGGCAAGTCTTCTCTTGCGGCGGCCTATCACCATCGACACCAGGCGAGACCATGTACCCTCTAGCATTGGCTGATGATGTGTGCAACACGAATTCAACTGGTGGATCTTCCAACTGCCAAGATCCGGATGTCTTCATAAGATCTCTTGTCCAGGGGAAGGTGATTATTTGCATGTTTGTGTCGTCAAACTACTACGAAGGCGACTTCCTTGCTGGCATTGTCGATACGATTCAGAAAATTGGTGCTGCCGGAGTTATCATCACTGACCGTTCTTCGAGTGACTCCGACATTGAATATCATCCCACATTTCCGACGTCAATCCCTTCAGCCATAGTTGTGAACAGTGCTGATGCACAGGCTCTATTGGAGTACTACGACGACAACTTGGTCCGAGACAAGGAAGGAAGTGTCACCAAGTTCGGCGCAACCATCCGAATTCTGGATGGACGGCGAGCAATCTACACCAGGGAGGCGCCCGTCGTCGCCGAGTACTCGTCGAGGGGCCCGGACGTCGACGACATGCAGATGCAGGCGGCGGACGTGCTGAAGCCGAACGTCATGGCGCCGGGCCATCACATCTGGGGAGCCTGGAGCCCGACGAGCGACGCCATGGTCGAGTTCCAGGGCGAGAGCTACGCGATGCTGTCCGGCACGAGCATGGCCACCCCGCACGTCGCCGGTGTGGTGGCCCTGATCAGGCAGAGGCACCCCAAGTGGAGCCCCGCCATGGTCATGTCGGCGATCATGACCACCGCCGACGTCACCGACCGCTCCGGGAGGCCCCTGATGGCGCGGCGTGACGGGGGCGTCCTGGAGCGCGCGACGCCGTTCGACATGGGCGCCGGGGCCATCAACGCGGCGCGCGCCGTCGACCCGGGCCTGGTGTTCGACGCCGGGTACCGGGACTACCTCCAGTTCCTGTGCGCCGTGCCTGGCGTGGACGACGCCGCGGTGCTCCGCGCGGTGGGCGTGCCCTGCCCGCCGTCGCGGGCGCGGTGGTGCTCGGACCTGAACGCGCCGAGCGTGACGGTGGCGAGCCTGGTGGGGTCGCGGCGGGTGGACCGGCGGGTGACGAGCGTGGGCGCGGAGAACGAGACGTACATGGCGCACGTGCAGGCGCCCGACGGCGTGGCGGTGCGCGTGTCGCCGGACACGTTCGCCGTCGCCCCCGGCGCGACGGCCACGCTGAGGATCGTGCTCAACACCACCGCGCCGGGGAACACCTTCAGCTTCGGCGAGGTGGTCCTCAGGGGCGACAAGAAGCACACCGTGAGGATCCCCCTCGCTGTCTTCCCCGCCGCGGCGTTGAGCCCGTGA
Protein Sequence
- >LOC_Os04g45960.1
MLALINAYLQAYKFQTSYDCSSDTIVMAFCKPCLVFYSVLTFLILNGGPSHVLAKVFMVVMEDDPIISPKSSQKKVMRGEEAQKYKAMTTTKHDIFLDSFLPAGSYKKLYSYTHLLNGFAIYAKSEKAIKTLSGAKGVRLIQEDIKMAKMTTYTPRYIGANVVWPLLGGAEKAGDGVVIGMVDTGIDPSNPSFLSTSDQAKPPPASFKGTCQTGERFPPDSCNGKIVGARWFARAGQATGEFNATMHYASPYDPDGHGSHTASTAAGNFHTPAISKGYNFGHASGVAPGAHLAIYKAAYSFGGYMSDVIAAVDKAVEDGVDIISLSLGPTTITSGPASFLNLLETQLLLATKAGISVVQAVGNGGPDANSVVSFSPWITSVGASTTDRKYNKSIIIGNGQVFSCGGLSPSTPGETMYPLALADDVCNTNSTGGSSNCQDPDVFIRSLVQGKVIICMFVSSNYYEGDFLAGIVDTIQKIGAAGVIITDRSSSDSDIEYHPTFPTSIPSAIVVNSADAQALLEYYDDNLVRDKEGSVTKFGATIRILDGRRAIYTREAPVVAEYSSRGPDVDDMQMQAADVLKPNVMAPGHHIWGAWSPTSDAMVEFQGESYAMLSGTSMATPHVAGVVALIRQRHPKWSPAMVMSAIMTTADVTDRSGRPLMARRDGGVLERATPFDMGAGAINAARAVDPGLVFDAGYRDYLQFLCAVPGVDDAAVLRAVGVPCPPSRARWCSDLNAPSVTVASLVGSRRVDRRVTSVGAENETYMAHVQAPDGVAVRVSPDTFAVAPGATATLRIVLNTTAPGNTFSFGEVVLRGDKKHTVRIPLAVFPAAALSP*