Information report for OsSub42;OsSP2
Gene Details
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Functional Descriptions
- We validated the stage-specificity of regulatory regions of three panicle-specific genes, OsAGO3, OsSub42, and RTS, and an early seed-specific gene, XYH, in transgenic rice.
Literature and News
Gene Resources
- UniProt: Q7XN07
- EMBL: AL606728
- AlphaFoldDB: Q7XN07
- KEGG: osa:4336553
- InterPro: IPR000209, IPR003137, IPR010259
- PANTHER: PTHR10795
- SUPFAM: SSF52743
- PROSITE: PS00136, PS00138, PS51892
- Gene3D: 2.60.40.2310, 3.40.50.200, 3.50.30.30
- OrthoDB: Q7XN07
- Conserved Domain Database: cd04852
Sequences
cDNA Sequence
- >LOC_Os04g45960.1
ATGCTTGCACTTATAAACGCATACCTTCAGGCATATAAGTTTCAAACTTCATACGATTGTTCAAGTGACACTATTGTCATGGCTTTTTGCAAACCATGTCTAGTATTCTATTCTGTTCTTACTTTTCTGATCCTAAATGGTGGTCCATCTCATGTACTTGCAAAGGTTTTTATGGTGGTGATGGAGGATGACCCAATCATTTCCCCCAAGTCAAGCCAAAAGAAAGTAATGAGAGGTGAGGAAGCTCAGAAGTACAAGGCAATGACCACAACGAAGCATGATATCTTCCTGGATTCATTTCTCCCAGCTGGATCTTACAAGAAGCTATACAGTTACACCCACCTTCTCAATGGCTTTGCTATCTATGCAAAATCTGAAAAGGCAATTAAAACTCTTAGTGGAGCAAAAGGAGTTAGACTCATCCAAGAAGATATAAAAATGGCCAAGATGACCACATACACTCCGAGGTACATTGGAGCTAATGTAGTCTGGCCGCTCCTCGGTGGTGCCGAGAAGGCTGGTGACGGAGTAGTCATTGGCATGGTAGATACTGGCATTGACCCCAGCAACCCAAGCTTTTTAAGCACATCGGACCAAGCAAAACCACCACCGGCCAGTTTCAAAGGAACATGTCAAACTGGCGAAAGATTTCCTCCAGATTCATGCAATGGTAAGATTGTTGGAGCTAGGTGGTTTGCACGTGCTGGTCAAGCAACTGGAGAGTTCAATGCTACAATGCACTATGCATCTCCTTACGATCCTGATGGCCATGGCAGCCACACAGCGTCCACTGCAGCTGGCAATTTTCATACGCCAGCAATATCAAAGGGCTACAACTTTGGGCATGCAAGTGGCGTAGCACCTGGAGCTCATCTTGCAATCTACAAAGCTGCCTATTCTTTTGGTGGATACATGTCAGATGTTATAGCTGCAGTTGACAAGGCTGTAGAAGATGGCGTCGATATTATCAGTCTTTCACTGGGACCAACTACTATTACATCTGGGCCAGCATCATTCCTCAATTTGCTCGAGACACAACTTCTCCTTGCCACCAAGGCTGGGATCTCAGTTGTTCAAGCAGTTGGCAATGGAGGCCCTGATGCAAACTCAGTAGTTTCGTTCAGCCCATGGATAACAAGTGTTGGGGCATCCACAACTGACAGGAAGTATAACAAATCAATTATAATTGGAAATGGGCAAGTCTTCTCTTGCGGCGGCCTATCACCATCGACACCAGGCGAGACCATGTACCCTCTAGCATTGGCTGATGATGTGTGCAACACGAATTCAACTGGTGGATCTTCCAACTGCCAAGATCCGGATGTCTTCATAAGATCTCTTGTCCAGGGGAAGGTGATTATTTGCATGTTTGTGTCGTCAAACTACTACGAAGGCGACTTCCTTGCTGGCATTGTCGATACGATTCAGAAAATTGGTGCTGCCGGAGTTATCATCACTGACCGTTCTTCGAGTGACTCCGACATTGAATATCATCCCACATTTCCGACGTCAATCCCTTCAGCCATAGTTGTGAACAGTGCTGATGCACAGGCTCTATTGGAGTACTACGACGACAACTTGGTCCGAGACAAGGAAGGAAGTGTCACCAAGTTCGGCGCAACCATCCGAATTCTGGATGGACGGCGAGCAATCTACACCAGGGAGGCGCCCGTCGTCGCCGAGTACTCGTCGAGGGGCCCGGACGTCGACGACATGCAGATGCAGGCGGCGGACGTGCTGAAGCCGAACGTCATGGCGCCGGGCCATCACATCTGGGGAGCCTGGAGCCCGACGAGCGACGCCATGGTCGAGTTCCAGGGCGAGAGCTACGCGATGCTGTCCGGCACGAGCATGGCCACCCCGCACGTCGCCGGTGTGGTGGCCCTGATCAGGCAGAGGCACCCCAAGTGGAGCCCCGCCATGGTCATGTCGGCGATCATGACCACCGCCGACGTCACCGACCGCTCCGGGAGGCCCCTGATGGCGCGGCGTGACGGGGGCGTCCTGGAGCGCGCGACGCCGTTCGACATGGGCGCCGGGGCCATCAACGCGGCGCGCGCCGTCGACCCGGGCCTGGTGTTCGACGCCGGGTACCGGGACTACCTCCAGTTCCTGTGCGCCGTGCCTGGCGTGGACGACGCCGCGGTGCTCCGCGCGGTGGGCGTGCCCTGCCCGCCGTCGCGGGCGCGGTGGTGCTCGGACCTGAACGCGCCGAGCGTGACGGTGGCGAGCCTGGTGGGGTCGCGGCGGGTGGACCGGCGGGTGACGAGCGTGGGCGCGGAGAACGAGACGTACATGGCGCACGTGCAGGCGCCCGACGGCGTGGCGGTGCGCGTGTCGCCGGACACGTTCGCCGTCGCCCCCGGCGCGACGGCCACGCTGAGGATCGTGCTCAACACCACCGCGCCGGGGAACACCTTCAGCTTCGGCGAGGTGGTCCTCAGGGGCGACAAGAAGCACACCGTGAGGATCCCCCTCGCTGTCTTCCCCGCCGCGGCGTTGAGCCCGTGAAGCCCCGAACAGGGATAGTCCTGGTATATACAAATATTACTTACGTATACGTATGCGAGCGGATGGAGTTGTACGATGAATGAATAACATGTATACATACACTATACTCGTGTTCGAGCAAACAAGAATACGAGCCATGTATCGTATAATCGGATATTATGGGCCGCAACGGACCAACCGGACTGTGCCCCTGCTGGGTTATTCCTCTAGTTGGGCCGGAGCACGGAGGAGAGCTGGTCAGCCATAATGGGCTTTCGTTCTGATGCAAAGCAACGGCCTCTGCTAACTTCGGCTTGTCGAGCATCTCTAGCAGCTTTTGCCAGATGCCAGACTACCATGGACGGGTTTGACTGTGGCTTCTCTTTTTAATTTTTTTGATTTGATGTGTCCAGTGATCTAATGATTGTTTAGCATTCTTAACGATGATATTAACTAGAAGCATACGCCATTTACGGATA
CDS Sequence
- >LOC_Os04g45960.1
ATGCTTGCACTTATAAACGCATACCTTCAGGCATATAAGTTTCAAACTTCATACGATTGTTCAAGTGACACTATTGTCATGGCTTTTTGCAAACCATGTCTAGTATTCTATTCTGTTCTTACTTTTCTGATCCTAAATGGTGGTCCATCTCATGTACTTGCAAAGGTTTTTATGGTGGTGATGGAGGATGACCCAATCATTTCCCCCAAGTCAAGCCAAAAGAAAGTAATGAGAGGTGAGGAAGCTCAGAAGTACAAGGCAATGACCACAACGAAGCATGATATCTTCCTGGATTCATTTCTCCCAGCTGGATCTTACAAGAAGCTATACAGTTACACCCACCTTCTCAATGGCTTTGCTATCTATGCAAAATCTGAAAAGGCAATTAAAACTCTTAGTGGAGCAAAAGGAGTTAGACTCATCCAAGAAGATATAAAAATGGCCAAGATGACCACATACACTCCGAGGTACATTGGAGCTAATGTAGTCTGGCCGCTCCTCGGTGGTGCCGAGAAGGCTGGTGACGGAGTAGTCATTGGCATGGTAGATACTGGCATTGACCCCAGCAACCCAAGCTTTTTAAGCACATCGGACCAAGCAAAACCACCACCGGCCAGTTTCAAAGGAACATGTCAAACTGGCGAAAGATTTCCTCCAGATTCATGCAATGGTAAGATTGTTGGAGCTAGGTGGTTTGCACGTGCTGGTCAAGCAACTGGAGAGTTCAATGCTACAATGCACTATGCATCTCCTTACGATCCTGATGGCCATGGCAGCCACACAGCGTCCACTGCAGCTGGCAATTTTCATACGCCAGCAATATCAAAGGGCTACAACTTTGGGCATGCAAGTGGCGTAGCACCTGGAGCTCATCTTGCAATCTACAAAGCTGCCTATTCTTTTGGTGGATACATGTCAGATGTTATAGCTGCAGTTGACAAGGCTGTAGAAGATGGCGTCGATATTATCAGTCTTTCACTGGGACCAACTACTATTACATCTGGGCCAGCATCATTCCTCAATTTGCTCGAGACACAACTTCTCCTTGCCACCAAGGCTGGGATCTCAGTTGTTCAAGCAGTTGGCAATGGAGGCCCTGATGCAAACTCAGTAGTTTCGTTCAGCCCATGGATAACAAGTGTTGGGGCATCCACAACTGACAGGAAGTATAACAAATCAATTATAATTGGAAATGGGCAAGTCTTCTCTTGCGGCGGCCTATCACCATCGACACCAGGCGAGACCATGTACCCTCTAGCATTGGCTGATGATGTGTGCAACACGAATTCAACTGGTGGATCTTCCAACTGCCAAGATCCGGATGTCTTCATAAGATCTCTTGTCCAGGGGAAGGTGATTATTTGCATGTTTGTGTCGTCAAACTACTACGAAGGCGACTTCCTTGCTGGCATTGTCGATACGATTCAGAAAATTGGTGCTGCCGGAGTTATCATCACTGACCGTTCTTCGAGTGACTCCGACATTGAATATCATCCCACATTTCCGACGTCAATCCCTTCAGCCATAGTTGTGAACAGTGCTGATGCACAGGCTCTATTGGAGTACTACGACGACAACTTGGTCCGAGACAAGGAAGGAAGTGTCACCAAGTTCGGCGCAACCATCCGAATTCTGGATGGACGGCGAGCAATCTACACCAGGGAGGCGCCCGTCGTCGCCGAGTACTCGTCGAGGGGCCCGGACGTCGACGACATGCAGATGCAGGCGGCGGACGTGCTGAAGCCGAACGTCATGGCGCCGGGCCATCACATCTGGGGAGCCTGGAGCCCGACGAGCGACGCCATGGTCGAGTTCCAGGGCGAGAGCTACGCGATGCTGTCCGGCACGAGCATGGCCACCCCGCACGTCGCCGGTGTGGTGGCCCTGATCAGGCAGAGGCACCCCAAGTGGAGCCCCGCCATGGTCATGTCGGCGATCATGACCACCGCCGACGTCACCGACCGCTCCGGGAGGCCCCTGATGGCGCGGCGTGACGGGGGCGTCCTGGAGCGCGCGACGCCGTTCGACATGGGCGCCGGGGCCATCAACGCGGCGCGCGCCGTCGACCCGGGCCTGGTGTTCGACGCCGGGTACCGGGACTACCTCCAGTTCCTGTGCGCCGTGCCTGGCGTGGACGACGCCGCGGTGCTCCGCGCGGTGGGCGTGCCCTGCCCGCCGTCGCGGGCGCGGTGGTGCTCGGACCTGAACGCGCCGAGCGTGACGGTGGCGAGCCTGGTGGGGTCGCGGCGGGTGGACCGGCGGGTGACGAGCGTGGGCGCGGAGAACGAGACGTACATGGCGCACGTGCAGGCGCCCGACGGCGTGGCGGTGCGCGTGTCGCCGGACACGTTCGCCGTCGCCCCCGGCGCGACGGCCACGCTGAGGATCGTGCTCAACACCACCGCGCCGGGGAACACCTTCAGCTTCGGCGAGGTGGTCCTCAGGGGCGACAAGAAGCACACCGTGAGGATCCCCCTCGCTGTCTTCCCCGCCGCGGCGTTGAGCCCGTGA
Protein Sequence
- >LOC_Os04g45960.1
MLALINAYLQAYKFQTSYDCSSDTIVMAFCKPCLVFYSVLTFLILNGGPSHVLAKVFMVVMEDDPIISPKSSQKKVMRGEEAQKYKAMTTTKHDIFLDSFLPAGSYKKLYSYTHLLNGFAIYAKSEKAIKTLSGAKGVRLIQEDIKMAKMTTYTPRYIGANVVWPLLGGAEKAGDGVVIGMVDTGIDPSNPSFLSTSDQAKPPPASFKGTCQTGERFPPDSCNGKIVGARWFARAGQATGEFNATMHYASPYDPDGHGSHTASTAAGNFHTPAISKGYNFGHASGVAPGAHLAIYKAAYSFGGYMSDVIAAVDKAVEDGVDIISLSLGPTTITSGPASFLNLLETQLLLATKAGISVVQAVGNGGPDANSVVSFSPWITSVGASTTDRKYNKSIIIGNGQVFSCGGLSPSTPGETMYPLALADDVCNTNSTGGSSNCQDPDVFIRSLVQGKVIICMFVSSNYYEGDFLAGIVDTIQKIGAAGVIITDRSSSDSDIEYHPTFPTSIPSAIVVNSADAQALLEYYDDNLVRDKEGSVTKFGATIRILDGRRAIYTREAPVVAEYSSRGPDVDDMQMQAADVLKPNVMAPGHHIWGAWSPTSDAMVEFQGESYAMLSGTSMATPHVAGVVALIRQRHPKWSPAMVMSAIMTTADVTDRSGRPLMARRDGGVLERATPFDMGAGAINAARAVDPGLVFDAGYRDYLQFLCAVPGVDDAAVLRAVGVPCPPSRARWCSDLNAPSVTVASLVGSRRVDRRVTSVGAENETYMAHVQAPDGVAVRVSPDTFAVAPGATATLRIVLNTTAPGNTFSFGEVVLRGDKKHTVRIPLAVFPAAALSP*