Gene Details:

Functional Descriptions:

  • The split-hull phenotype caused by reduced lemma width and low lignin content is under control of SPH encoding a type-2 13-lipoxygenase and contributes to high dehulling efficiency.
  • Morphological and chemical analysis revealed that reduction in the width of the lemma and lignin content of the hull in the SPH mutant might be the cause of hull splitting.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os04g37430.1
    ATGAGGGGAGGGGCGGGGATGTGTTTCGCGAGCATGGAGGCGGCGGGGAGCAGGGGGATGGGGAAGGGGGCGAGTAGGAGGAGGACGGCGAGGTCGACGGCGCCGGTGGGCGCGCTGGTGGAGCGGGTGGTGGTGGCGCCGGCGCCGGTGGAGCAGCAGCGCGGGGCGGGGCGGCCGGAGGCGCACCCGCAGAGCGTGGCGGCCAGGGCCGTGGTGACCGTGCGGCGGAGGCGCAAGGAGGACGCCAAGGACCGCTTCGCCGAGCAGCTCGACGCCCTCGCCGACAGGGTCGGCCGCAGCGTCCTCCTCGAGCTCGTCAGCACGGAGACCGACCCAAGGAAGGGGACGCCGAAGAAGAGCAAGCCGTCGGCGCTGGTGGGGTGGTTCGACAAGAAGGACGTCAAGGCGGAGCGCGTGGTGTACACGGCGGAGTTCGCCGTCGACGCCGGGTTCGGCGAGCCGGGCGCGGTGACCGTGCTCAACCGCCACCAGCGGGAGTTCTACATCGAGAGCATCGTCGTCGAGGGGTTCCCGACCGGCCCGGCGCACTTCACCTGCAACTCGTGGGTGCAGCCCACGCGCGTGAGCCGCGACCGGCGCGTGTTCTTCAGCAACCGGCCGTACCTGCCGTCGGAGACGCCGCCGGGGCTGAGGGAGCTCCGGCTCCGGGAGCTCGCCGACCTCCGCGGCGACGGCACCGGCGAGCGGAGGATCACCGACCGGGTGTACGACTACGACGTGTACAACGACCTGGGCAACCCGGACAAGGGCGTCGCCTCCGCCCGCCCCGTCCTCGGCGGCGAGCAGATGCCGTACCCGCGGCGGATGCGCACCGGCCACGCGAGCGCGGAGAGCAGGGTGGAGTACCCGGAGCCCATCTACGTGTCGCGGGACGAGGAGTTCGAGGAGGGCAAGAACGAGATGCTGTCGGAGGGCGCGATCAAGGCGCTGCTCCACAACTTCATGCCGCTGCTCGTCTCCTCCGTCTCGCCGGACATCCGCGACTTCGCCGGCTTCCACGACGTCGACAACCTCTTCAAGGAGGGCCTCCGCCTCAAGCAGGCGCTCCACGACCAGCTCTTCCAGAAGATCCCCTTCGTCCGCAAGATCCAGGAGAACAGCGAGGGCCTCCTCCGCTACGACACCCCCGACATCATCAAGAAGGACAAGTTCGCGTGGCTGCGTGACGACGAGTTCGCGAGGCAGGCGCTTGCCGGCATCAACCCCGTCAACATCGAGCGTCTCCAGGCGTTCCCGCCGGTGAGCAAGCTCGACCCGGCCGTGTACGGCCCGCCGGAGTCGGCGATCACGGAGGAGCACATCATCGGGCACCTCGACGGCATGTCGGTGCAGGAGGCGGTGGAGGGGAGCAGGCTGTACATGCTGGATTACCACGACATCTTCCTCCCGTTCCTGGACAGGATCAACGCCCAGGACGGCCGGAAGGCGTACGGCACGCGCGCGGTCTTCTTCCTGACGGCCGCCGGCACGCTGAAGCCGATCGCCATCGAGCTGTGCCTGCCGCCGATGACAGACGGCTGCAAGCGCGCCAAGCGGGTGTTCACGCCGCCGGCCGACGCCACCAGCAACTGGCTGTGGCAGCTCGCCAAGGCACACGTCTGCTCCAACGACGCCGGTGTTCACCAGCTCATCAACCACTGGTTGAGGACGCACGCGTGCATGGAGCCGTTCATCATCGCGGCGCACCGGCAGATGAGCGCGATGCACCCCATCTTCAAGCTGCTCAAGCCGCACATGCGGTACACGCTCAAGATCAACGCGCTGGCGCGGCAGATCCTCATCAATGGCGACGGCGTCATCGAGTCGGGCTTCACACCCGGCAACGTCTGCATGGAGATGAGCGCCTTCGCCTACCGGGAACTATGGCGGCTGGACCAGGAGGGCCTCCCCGCCGACCTCATCCGAAGGTACACGTCGAAATGTTTGCGTTCTTGCAGTGACCACAATGCGGTGCGAGTGCAACGGCGGTGGCTAAATTTGTTTGGTGTTTGGTTGTGTCGTGTAGAGGCATGGCCGTGGAGGACCCGAGCCAGCCGCACGGGCTACGGCTGCTCATCGAGGACTACCCGTACGCCGCCGACGGGCTGCTCCTCTGGTCGGCGATCTCGCGGTGGTGCGAGGCGTACGTGGCGGCCTACTACCCGAGCGACGAGGCCGTGCAGGCGGACTACGAGCTGCAGTCGTGGTACGCCGAGGCCGTGCAGAGCGGGCACGCGGACAAGCGCGGCGCGCCGTGGTGGCCGCGCCTCTCGACGCCCGGCGACCTGGCCTCCCTGCTCACCACCCTGGTGTGGCTCTGCTCGGCGCAGCACGCGGCGCTCAACTTCGGGCAGTACCCGCTCGGTGGCTACATCCCGAACCGCCCGCCGCTGATGCGCCGCCTGGTGCCCGCCGAGGGCGACCCAGAGTACGCGCACCTCGTCGCCGACCCGCACCGCTTCTTCCTCTCGGCGCTGCCCAGCCTGACGCAGACCACGACGTTCATGACCGTCATCGACACGCTGTCCACGCACTCCGCCGACGAGGAGTACCTCGGGGAGCGCCCCGACGAGGCGTGGACGGCCGACCCGGCGGCGCTGGCGGCCGCGCGGGAGTTCGCGGCCGACGTGCGCCGCGCCGAGGAGGAGATCGAGCGGCGCAATGCCGACCCCTCCCGGCGCAACCGTTGCGGCGCCGGCGTGCTGCCGTACGAGCTGATGGCGCCGTCGTCCGGACCGGGCATCACCTGCCGGGGCGTGCCAAACAGCGTAACTATATAGACGTTATTATTGCGATTTGCGCGAATTTTTCGCGGTCATTATACAGGGAGAAATTTGGGCGAAAGTAAATGATTTTGCTGCAAATTTTTCTTCGGATAGGTCGATTGCTAAGTTTTCGGCTCAAATAGGAAAATATTGATTTTTTGTCGAAAGGTGGACATTTGATATTGTAGATTGTAAATAATCTGGTATAGTCAATAGGAAAATAAGTGGAATATAGAGAATCTCATGATATTTTTTTC
CDS Sequence
  • >LOC_Os04g37430.1
    ATGAGGGGAGGGGCGGGGATGTGTTTCGCGAGCATGGAGGCGGCGGGGAGCAGGGGGATGGGGAAGGGGGCGAGTAGGAGGAGGACGGCGAGGTCGACGGCGCCGGTGGGCGCGCTGGTGGAGCGGGTGGTGGTGGCGCCGGCGCCGGTGGAGCAGCAGCGCGGGGCGGGGCGGCCGGAGGCGCACCCGCAGAGCGTGGCGGCCAGGGCCGTGGTGACCGTGCGGCGGAGGCGCAAGGAGGACGCCAAGGACCGCTTCGCCGAGCAGCTCGACGCCCTCGCCGACAGGGTCGGCCGCAGCGTCCTCCTCGAGCTCGTCAGCACGGAGACCGACCCAAGGAAGGGGACGCCGAAGAAGAGCAAGCCGTCGGCGCTGGTGGGGTGGTTCGACAAGAAGGACGTCAAGGCGGAGCGCGTGGTGTACACGGCGGAGTTCGCCGTCGACGCCGGGTTCGGCGAGCCGGGCGCGGTGACCGTGCTCAACCGCCACCAGCGGGAGTTCTACATCGAGAGCATCGTCGTCGAGGGGTTCCCGACCGGCCCGGCGCACTTCACCTGCAACTCGTGGGTGCAGCCCACGCGCGTGAGCCGCGACCGGCGCGTGTTCTTCAGCAACCGGCCGTACCTGCCGTCGGAGACGCCGCCGGGGCTGAGGGAGCTCCGGCTCCGGGAGCTCGCCGACCTCCGCGGCGACGGCACCGGCGAGCGGAGGATCACCGACCGGGTGTACGACTACGACGTGTACAACGACCTGGGCAACCCGGACAAGGGCGTCGCCTCCGCCCGCCCCGTCCTCGGCGGCGAGCAGATGCCGTACCCGCGGCGGATGCGCACCGGCCACGCGAGCGCGGAGAGCAGGGTGGAGTACCCGGAGCCCATCTACGTGTCGCGGGACGAGGAGTTCGAGGAGGGCAAGAACGAGATGCTGTCGGAGGGCGCGATCAAGGCGCTGCTCCACAACTTCATGCCGCTGCTCGTCTCCTCCGTCTCGCCGGACATCCGCGACTTCGCCGGCTTCCACGACGTCGACAACCTCTTCAAGGAGGGCCTCCGCCTCAAGCAGGCGCTCCACGACCAGCTCTTCCAGAAGATCCCCTTCGTCCGCAAGATCCAGGAGAACAGCGAGGGCCTCCTCCGCTACGACACCCCCGACATCATCAAGAAGGACAAGTTCGCGTGGCTGCGTGACGACGAGTTCGCGAGGCAGGCGCTTGCCGGCATCAACCCCGTCAACATCGAGCGTCTCCAGGCGTTCCCGCCGGTGAGCAAGCTCGACCCGGCCGTGTACGGCCCGCCGGAGTCGGCGATCACGGAGGAGCACATCATCGGGCACCTCGACGGCATGTCGGTGCAGGAGGCGGTGGAGGGGAGCAGGCTGTACATGCTGGATTACCACGACATCTTCCTCCCGTTCCTGGACAGGATCAACGCCCAGGACGGCCGGAAGGCGTACGGCACGCGCGCGGTCTTCTTCCTGACGGCCGCCGGCACGCTGAAGCCGATCGCCATCGAGCTGTGCCTGCCGCCGATGACAGACGGCTGCAAGCGCGCCAAGCGGGTGTTCACGCCGCCGGCCGACGCCACCAGCAACTGGCTGTGGCAGCTCGCCAAGGCACACGTCTGCTCCAACGACGCCGGTGTTCACCAGCTCATCAACCACTGGTTGAGGACGCACGCGTGCATGGAGCCGTTCATCATCGCGGCGCACCGGCAGATGAGCGCGATGCACCCCATCTTCAAGCTGCTCAAGCCGCACATGCGGTACACGCTCAAGATCAACGCGCTGGCGCGGCAGATCCTCATCAATGGCGACGGCGTCATCGAGTCGGGCTTCACACCCGGCAACGTCTGCATGGAGATGAGCGCCTTCGCCTACCGGGAACTATGGCGGCTGGACCAGGAGGGCCTCCCCGCCGACCTCATCCGAAGGTACACGTCGAAATGTTTGCGTTCTTGCAGTGACCACAATGCGGTGCGAGTGCAACGGCGGTGGCTAAATTTGTTTGGTGTTTGGTTGTGTCGTGTAGAGGCATGGCCGTGGAGGACCCGAGCCAGCCGCACGGGCTACGGCTGCTCATCGAGGACTACCCGTACGCCGCCGACGGGCTGCTCCTCTGGTCGGCGATCTCGCGGTGGTGCGAGGCGTACGTGGCGGCCTACTACCCGAGCGACGAGGCCGTGCAGGCGGACTACGAGCTGCAGTCGTGGTACGCCGAGGCCGTGCAGAGCGGGCACGCGGACAAGCGCGGCGCGCCGTGGTGGCCGCGCCTCTCGACGCCCGGCGACCTGGCCTCCCTGCTCACCACCCTGGTGTGGCTCTGCTCGGCGCAGCACGCGGCGCTCAACTTCGGGCAGTACCCGCTCGGTGGCTACATCCCGAACCGCCCGCCGCTGA
Protein Sequence
  • >LOC_Os04g37430.1
    MRGGAGMCFASMEAAGSRGMGKGASRRRTARSTAPVGALVERVVVAPAPVEQQRGAGRPEAHPQSVAARAVVTVRRRRKEDAKDRFAEQLDALADRVGRSVLLELVSTETDPRKGTPKKSKPSALVGWFDKKDVKAERVVYTAEFAVDAGFGEPGAVTVLNRHQREFYIESIVVEGFPTGPAHFTCNSWVQPTRVSRDRRVFFSNRPYLPSETPPGLRELRLRELADLRGDGTGERRITDRVYDYDVYNDLGNPDKGVASARPVLGGEQMPYPRRMRTGHASAESRVEYPEPIYVSRDEEFEEGKNEMLSEGAIKALLHNFMPLLVSSVSPDIRDFAGFHDVDNLFKEGLRLKQALHDQLFQKIPFVRKIQENSEGLLRYDTPDIIKKDKFAWLRDDEFARQALAGINPVNIERLQAFPPVSKLDPAVYGPPESAITEEHIIGHLDGMSVQEAVEGSRLYMLDYHDIFLPFLDRINAQDGRKAYGTRAVFFLTAAGTLKPIAIELCLPPMTDGCKRAKRVFTPPADATSNWLWQLAKAHVCSNDAGVHQLINHWLRTHACMEPFIIAAHRQMSAMHPIFKLLKPHMRYTLKINALARQILINGDGVIESGFTPGNVCMEMSAFAYRELWRLDQEGLPADLIRRYTSKCLRSCSDHNAVRVQRRWLNLFGVWLCRVEAWPWRTRASRTGYGCSSRTTRTPPTGCSSGRRSRGGARRTWRPTTRATRPCRRTTSCSRGTPRPCRAGTRTSAARRGGRASRRPATWPPCSPPWCGSARRSTRRSTSGSTRSVATSRTARR*