Gene Details:
- MSU gene ID: LOC_Os04g32850
- RAPdb gene ID: Os04g0401000
- Gene Symbol: Pi21
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Wild-type Pi21 appears to slow the plant’s defense responses, which may support optimization of defense mechanisms.
- The resistant Pi21 allele, which is found in some strains of japonica rice, could improve blast resistance of rice worldwide.
- QTL analysis and mapping of Pi21 , a recessive gene for field resistance to rice blast in Japanese upland rice.
- Transcriptome Analysis Highlights Defense and Signaling Pathways Mediated by Rice Pi21 Gene with Partial Resistance to Magnaporthe oryzae.
- The Pi21 gene confers partial and durable resistance to Magnaporthe oryzae.
- However, little is known regarding the molecular mechanisms of resistance mediated by the loss-of-function of Pi21.
- This study highlights possible candidate genes that may serve a function in the partial rice blast resistance mediated by the loss-of-function of Pi21 and increase our understanding of the molecular mechanisms involved in partial resistance against M.
Function-related keywords:
Literature:
- QTL analysis and mapping of pi21, a recessive gene for field resistance to rice blast in Japanese upland rice . DOI: 10.1007/s001220100611
- Loss of function of a proline-containing protein confers durable disease resistance in rice . DOI: 10.1126/science.1175550 ; PMID: 19696351
- Transcriptome Analysis Highlights Defense and Signaling Pathways Mediated by Rice pi21 Gene with Partial Resistance to Magnaporthe oryzae . DOI: 10.3389/fpls.2016.01834 ; PMID: 28008334
Related News:
Gene Resources:
- NCBI ID: AB430852
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os04g32850.1
CCATCCATGCATCGCCTCCATTATTCATGCTTCGATTCTCCATGCTTTCCTCTACTGCTCATTGGTAACATTCGGCAAATTTGACAGATGGGTATATTGGTCATCTTGGTGGACCTGCAATGCTGCCGCTGCGATGCCAAGATCAGGAAGGTCCTGGGCTGCCTTGAAGAGGAGTACTGCATCGAGAAGGTGGAGTACGACGTGAAGAACAACAGGGTGATCGTGCGCGGGAAGTTCGACCCGGAGAAGCTGTGCAAGAAGATCTGGTGCAAGGCCGGCAAGATCATCAAGGAGATCCTCATCGTCGACGTCTGGCCGCCGCCGCTGCCGCAGCCGCCGCCGCCGTGCAAGCCGCCGCCGTGCGAGAAGCCTCCGGAGGACTGCAAGCCCAAGCCCTGCCATTGCTGCAGCTGCGAGAAGCCCAAGCCCAAGCCCAAGCCCTGCCACTGCGAGAAGCCCAAGCCCTGTCACTGCGAGAAGCCCAAGCCATGCGAGAAGCCGCCGCCGTGCAAGCCGGAGGAGCCGCCGAAGCCGCCGCCGGAGAAGCCGCCGCCGAAGCCGGAGTGCAAGCTGGTGCCGTACCCTTACCCGGTGCCGTACCCGTACGCCGGGCAGTGGTGCTGCCCAAAGCCTGAGCCGCCGAAGCCGCCGCCGGAGCCACCGAAGGAGCCGGAGCCGCCGAAGCCGTGCGGGTGCTCGCACGCCTTCGTGTGCGTCTGCAAGCCGGCGCCGCCGCCGCCGCCGCCGTGCGGGTGCTCGGGGGGCCACGGGAACTGCGGCTGCGGCATCAGGCCGTGGCCGCCGCAGGTGTGGCCGCCGCCGCCCGTCTGCCCGCCGCCGCCGTGGTGCTACACCGAGGACAACGCCAACGCCTGCTCCATCATGTGATGGCCGGCCGGCGGTCGGCGTCGATCACGATCATCTCTGCTGCTTAATTTCCTTGCTTGCTACTACCTCTGCTCCTTTCCTTGCCTCGGAAATCGGAATAAATTAAACACGAGGCTGATCGATGTGTTTGTAATTAATCCATGGTGTTTGTGTTGTGTGCTGTGTGGGCTGTATAATAATTAATTACAGTATGTTCATGTAAATTTGTTTGTTTGTTTGTTTATGTTGTTCGATATGTATAATTATGTACAATAATTAATCGTGGAGAGGCTCACTAAACTCATAAACTGTAGAGTATCTTGGCTGTAAAAGTGTGGCAATTTATCTTTTTCTTGTGTTAGCATTGGCTACAAATAGTTTTTGGCCGTCT - >LOC_Os04g32850.3
CCATCCATGCATCGCCTCCATTATTCATGCTTCGATTCTCCATGCTTTCCTCTACTGCTCATTGGTAACATTCGGCAAATTTGACAGATGGGTATATTGGTCATCTTGGTGGACCTGCAATGCTGCCGCTGCGATGCCAAGATCAGGAAGGTCCTGGGCTGCCTTGAAGAGGAGTACTGCATCGAGAAGGTGGAGTACGACGTGAAGAACAACAGGGTGATCGTGCGCGGGAAGTTCGACCCGGAGAAGCTGTGCAAGAAGATCTGGTGCAAGGCCGGCAAGATCATCAAGGAGATCCTCATCGTCGACGTCTGGCCGCCGCCGCTGCCGCAGCCGCCGCCGCCGTGCAAGCCGCCGCCGTGCGAGAAGCCTCCGGAGGACTGCAAGCCCAAGCCCTGCCATTGCTGCAGCTGCGAGAAGCCCAAGCCCAAGCCCAAGCCCTGCCACTGCGAGAAGCCCAAGCCCTGTCACTGCGAGAAGCCCAAGCCATGCGAGAAGCCGCCGCCGTGCAAGCCGGAGGAGCCGCCGAAGCCGCCGCCGGAGAAGCCGCCGCCGAAGCCGGAGTGCAAGCTGGTGCCGTACCCTTACCCGGTGCCGTACCCGTACGCCGGGCAGTGGTGCTGCCCAAAGCCTGAGCCGCCGAAGCCGCCGCCGGAGCCACCGAAGGAGCCGGAGCCGCCGAAGCCGTGCGGGTGCTCGCACGCCTTCGTGTGCGTCTGCAAGCCGGCGCCGCCGCCGCCGCCGCCGTGCGGGTGCTCGGGGGGCCACGGGAACTGCGGCTGCGGCATCAGGCCGTGGCCGCCGCAGGTGTGGCCGCCGCCGCCCGTCTGCCCGCCGCCGCCGTGGTGCTACACCGAGGACAACGCCAACGCCTGCTCCATCATGTGATGGCCGGCCGGCGGTCGGCGTCGATCACGATCATCTCTGCTGCTTAATTTCCTTGCTTGCTACTACCTCTGCTCCTTTCCTTGCCTCGGAAATCGGAATAAATTAAACACGAGGCTGATCGATGTGTTTGTAATTAATCCATGGTGTTTGTGTTGTGTGCTGTGTGGGCTGTATAATAATTAATTACAGTATGTTCATGTAAATTTGTTTGTTTGTTTGTTTATGTTGTTCGATATGTATAATTATGTACAATAATTAATCGTGGAGAGGCTCACTAAACTCATAAACTGTAGAGTATCTTGGCTGTAAAAGTGTGGCAATTTATCTTTTTCTTGTGTTAGCATTGGCTACAAATAGTTTTTGGCCGTCT - >LOC_Os04g32850.2
CCATCCATGCATCGCCTCCATTATTCATGCTTCGATTCTCCATGCTTTCCTCTACTGCTCATTGGTAACATTCGGCAAATTTGACAGATGGGTATATTGGTCATCTTGGTGGACCTGCAATGCTGCCGCTGCGATGCCAAGATCAGGAAGGTCCTGGGCTGCCTTGAAGAGGAGTACTGCATCGAGAAGGTGGAGTACGACGTGAAGAACAACAGGGTGATCGTGCGCGGGAAGTTCGACCCGGAGAAGCTGTGCAAGAAGATCTGGTGCAAGGCCGGCAAGATCATCAAGGAGATCCTCATCGTCGACGTCTGGCCGCCGCCGCTGCCGCAGCCGCCGCCGCCGTGCAAGCCGCCGCCGTGCGAGAAGCCTCCGGAGGACTGCAAGCCCAAGCCCTGCCATTGCTGCAGCTGCGAGAAGCCCAAGCCCAAGCCCAAGCCCTGCCACTGCGAGAAGCCCAAGCCCTGTCACTGCGAGAAGCCCAAGCCATGCGAGAAGCCGCCGCCGTGCAAGCCGGAGGAGCCGCCGAAGCCGCCGCCGGAGAAGCCGCCGCCGAAGCCGGAGTGCAAGCTGGTGCCGTACCCTTACCCGGTGCCGTACCCGTACGCCGGGCAGTGGTGCTGCCCAAAGCCTGAGCCGCCGAAGCCGCCGCCGGAGCCACCGAAGGAGCCGGAGCCGCCGAAGCCGTGCGGGTGCTCGCACGCCTTCGTGTGCGTCTGCAAGCCGGCGCCGCCGCCGCCGCCGCCGTGCGGGTGCTCGGGGGGCCACGGGAACTGCGGCTGCGGCATCAGGCCGTGGCCGCCGCAGGTGTGGCCGCCGCCGCCCGTCTGCCCGCCGCCGCCGTGGTGCTACACCGAGGACAACGCCAACGCCTGCTCCATCATGTGATGGCCGGCCGGCGGTCGGCGTCGATCACGATCATCTCTGCTGCTTAATTTCCTTGCTTGCTACTACCTCTGCTCCTTTCCTTGCCTCGGAAATCGGAATAAATTAAACACGAGGCTGATCGATGTGTTTGTAATTAATCCATGGTGTTTGTGTTGTGTGCTGTGTGGGCTGTATAATAATTAATTACAGTATGTTCATGTAAATTTGTTTGTTTGTTTGTTTATGTTGTTCGATATGTATAATTATGTACAATAATTAATCGTGGAGAGGCTCACTAAACTCATAAACTGTAGAGTATCTTGGCTGTAAAAGTGTGGCAATTTATCTTTTTCTTGTGTTAGCATTGGCTACAAATAGTTTTTGGCCGTCT
CDS Sequence
- >LOC_Os04g32850.1
ATGGGTATATTGGTCATCTTGGTGGACCTGCAATGCTGCCGCTGCGATGCCAAGATCAGGAAGGTCCTGGGCTGCCTTGAAGAGGAGTACTGCATCGAGAAGGTGGAGTACGACGTGAAGAACAACAGGGTGATCGTGCGCGGGAAGTTCGACCCGGAGAAGCTGTGCAAGAAGATCTGGTGCAAGGCCGGCAAGATCATCAAGGAGATCCTCATCGTCGACGTCTGGCCGCCGCCGCTGCCGCAGCCGCCGCCGCCGTGCAAGCCGCCGCCGTGCGAGAAGCCTCCGGAGGACTGCAAGCCCAAGCCCTGCCATTGCTGCAGCTGCGAGAAGCCCAAGCCCAAGCCCAAGCCCTGCCACTGCGAGAAGCCCAAGCCCTGTCACTGCGAGAAGCCCAAGCCATGCGAGAAGCCGCCGCCGTGCAAGCCGGAGGAGCCGCCGAAGCCGCCGCCGGAGAAGCCGCCGCCGAAGCCGGAGTGCAAGCTGGTGCCGTACCCTTACCCGGTGCCGTACCCGTACGCCGGGCAGTGGTGCTGCCCAAAGCCTGAGCCGCCGAAGCCGCCGCCGGAGCCACCGAAGGAGCCGGAGCCGCCGAAGCCGTGCGGGTGCTCGCACGCCTTCGTGTGCGTCTGCAAGCCGGCGCCGCCGCCGCCGCCGCCGTGCGGGTGCTCGGGGGGCCACGGGAACTGCGGCTGCGGCATCAGGCCGTGGCCGCCGCAGGTGTGGCCGCCGCCGCCCGTCTGCCCGCCGCCGCCGTGGTGCTACACCGAGGACAACGCCAACGCCTGCTCCATCATGTGA - >LOC_Os04g32850.3
ATGGGTATATTGGTCATCTTGGTGGACCTGCAATGCTGCCGCTGCGATGCCAAGATCAGGAAGGTCCTGGGCTGCCTTGAAGAGGAGTACTGCATCGAGAAGGTGGAGTACGACGTGAAGAACAACAGGGTGATCGTGCGCGGGAAGTTCGACCCGGAGAAGCTGTGCAAGAAGATCTGGTGCAAGGCCGGCAAGATCATCAAGGAGATCCTCATCGTCGACGTCTGGCCGCCGCCGCTGCCGCAGCCGCCGCCGCCGTGCAAGCCGCCGCCGTGCGAGAAGCCTCCGGAGGACTGCAAGCCCAAGCCCTGCCATTGCTGCAGCTGCGAGAAGCCCAAGCCCAAGCCCAAGCCCTGCCACTGCGAGAAGCCCAAGCCCTGTCACTGCGAGAAGCCCAAGCCATGCGAGAAGCCGCCGCCGTGCAAGCCGGAGGAGCCGCCGAAGCCGCCGCCGGAGAAGCCGCCGCCGAAGCCGGAGTGCAAGCTGGTGCCGTACCCTTACCCGGTGCCGTACCCGTACGCCGGGCAGTGGTGCTGCCCAAAGCCTGAGCCGCCGAAGCCGCCGCCGGAGCCACCGAAGGAGCCGGAGCCGCCGAAGCCGTGCGGGTGCTCGCACGCCTTCGTGTGCGTCTGCAAGCCGGCGCCGCCGCCGCCGCCGCCGTGCGGGTGCTCGGGGGGCCACGGGAACTGCGGCTGCGGCATCAGGCCGTGGCCGCCGCAGGTGTGGCCGCCGCCGCCCGTCTGCCCGCCGCCGCCGTGGTGCTACACCGAGGACAACGCCAACGCCTGCTCCATCATGTGA - >LOC_Os04g32850.2
ATGGGTATATTGGTCATCTTGGTGGACCTGCAATGCTGCCGCTGCGATGCCAAGATCAGGAAGGTCCTGGGCTGCCTTGAAGAGGAGTACTGCATCGAGAAGGTGGAGTACGACGTGAAGAACAACAGGGTGATCGTGCGCGGGAAGTTCGACCCGGAGAAGCTGTGCAAGAAGATCTGGTGCAAGGCCGGCAAGATCATCAAGGAGATCCTCATCGTCGACGTCTGGCCGCCGCCGCTGCCGCAGCCGCCGCCGCCGTGCAAGCCGCCGCCGTGCGAGAAGCCTCCGGAGGACTGCAAGCCCAAGCCCTGCCATTGCTGCAGCTGCGAGAAGCCCAAGCCCAAGCCCAAGCCCTGCCACTGCGAGAAGCCCAAGCCCTGTCACTGCGAGAAGCCCAAGCCATGCGAGAAGCCGCCGCCGTGCAAGCCGGAGGAGCCGCCGAAGCCGCCGCCGGAGAAGCCGCCGCCGAAGCCGGAGTGCAAGCTGGTGCCGTACCCTTACCCGGTGCCGTACCCGTACGCCGGGCAGTGGTGCTGCCCAAAGCCTGAGCCGCCGAAGCCGCCGCCGGAGCCACCGAAGGAGCCGGAGCCGCCGAAGCCGTGCGGGTGCTCGCACGCCTTCGTGTGCGTCTGCAAGCCGGCGCCGCCGCCGCCGCCGCCGTGCGGGTGCTCGGGGGGCCACGGGAACTGCGGCTGCGGCATCAGGCCGTGGCCGCCGCAGGTGTGGCCGCCGCCGCCCGTCTGCCCGCCGCCGCCGTGGTGCTACACCGAGGACAACGCCAACGCCTGCTCCATCATGTGA
Protein Sequence
- >LOC_Os04g32850.1
MGILVILVDLQCCRCDAKIRKVLGCLEEEYCIEKVEYDVKNNRVIVRGKFDPEKLCKKIWCKAGKIIKEILIVDVWPPPLPQPPPPCKPPPCEKPPEDCKPKPCHCCSCEKPKPKPKPCHCEKPKPCHCEKPKPCEKPPPCKPEEPPKPPPEKPPPKPECKLVPYPYPVPYPYAGQWCCPKPEPPKPPPEPPKEPEPPKPCGCSHAFVCVCKPAPPPPPPCGCSGGHGNCGCGIRPWPPQVWPPPPVCPPPPWCYTEDNANACSIM* - >LOC_Os04g32850.3
MGILVILVDLQCCRCDAKIRKVLGCLEEEYCIEKVEYDVKNNRVIVRGKFDPEKLCKKIWCKAGKIIKEILIVDVWPPPLPQPPPPCKPPPCEKPPEDCKPKPCHCCSCEKPKPKPKPCHCEKPKPCHCEKPKPCEKPPPCKPEEPPKPPPEKPPPKPECKLVPYPYPVPYPYAGQWCCPKPEPPKPPPEPPKEPEPPKPCGCSHAFVCVCKPAPPPPPPCGCSGGHGNCGCGIRPWPPQVWPPPPVCPPPPWCYTEDNANACSIM* - >LOC_Os04g32850.2
MGILVILVDLQCCRCDAKIRKVLGCLEEEYCIEKVEYDVKNNRVIVRGKFDPEKLCKKIWCKAGKIIKEILIVDVWPPPLPQPPPPCKPPPCEKPPEDCKPKPCHCCSCEKPKPKPKPCHCEKPKPCHCEKPKPCEKPPPCKPEEPPKPPPEKPPPKPECKLVPYPYPVPYPYAGQWCCPKPEPPKPPPEPPKEPEPPKPCGCSHAFVCVCKPAPPPPPPCGCSGGHGNCGCGIRPWPPQVWPPPPVCPPPPWCYTEDNANACSIM*