Information report for OsPUB7
Gene Details
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Functional Descriptions
- In this study, to investigate the function of OsPUB7 (Plant U-box gene in Oryza sativa), we constructed a CRISPR/Cas9 vector, generated OsPUB7 gene-edited individuals, and evaluated resistance to abiotic stress using gene-edited lines.
- This result provides evidence that OsPUB7 will be a useful target for both breeding and future research on drought tolerance/abiotic stress in rice.
- Knockout Mutants of OsPUB7 Generated Using CRISPR/Cas9 Revealed Abiotic Stress Tolerance in Rice.
Functional Keywords
Literature and News
Gene Resources
- UniProt: Q0JE01
- EMBL: AP008210
- AlphaFoldDB: Q0JE01
- EnsemblPlants: Os04t0348400-01
- Gramene: Os04t0348400-01
- KEGG: dosa:Os04g0348400, osa:4335543
- Orthologous matrix: EHNKENC
- InterPro: IPR000225, IPR003613, IPR011989
- PANTHER: PTHR23315, PTHR23315:SF250
- SUPFAM: SSF48371, SSF57850
- PROSITE: PS51698
- Gene3D: 1.25.10.10, 3.30.40.10
- OrthoDB: Q0JE01
- SWISS-MODEL: Q0JE01
- Conserved Domain Database: cd16664
Homologs
- Arabidopsis thaliana: AT3G07360
- Cucumis melo: MELO3C027221
- Daucus carota: DCAR_005320
- Glycine max: Glyma.11G140100, Glyma.12G063700, GmPUB13
- Gossypium hirsutum: Gohir.D05G096500
- Juglans regia: Jr14_11400
- Nicotiana attenuata: A4A49_56617
- Prunus avium: Pav_sc0000087.1_g580.1.mk
- Prunus persica: PRUPE_6G079400
- Rosa chinensis: RchiOBHm_Chr5g0063991
- Sesamum indicum: SIN_1024201
- Solanum lycopersicum: Solyc06g076040.3
- Solanum tuberosum: PGSC0003DMG400030407
Sequences
cDNA Sequence
- >LOC_Os04g28100.1
GTCTAGTCTACTCCTCCCACTCTCTCTCTCTCTCTCTCCCTCTCTCTCCCCTCGCCGCCGCCGCGACGCGACGCGTCCCCATCACCGACATGGCGAAGCCGGCGCCGGCGCCGGCGGCCGGGGCGCGGGAGGACGAGGACGCGCCGGCGCTGCGGAGGCGCCTGCGCAGGCTCGTGGCGGCGGCCACCGCCGGCGCCGCCTCGGAGTCCGTGCTCGACGAGGCCGCCGCGGCGCTCGCGGCGCTGCGGGATGCGGAGGTCGGCGTCGGGAGGAAGGGCGTCGGAGGAGGAGAGGAGGCGGCCGCCGCCGCCGTCCCGGCGCTGTTCCTGTGCCCGATCTCGTCCGGGATCATGAGGGACCCCGTCGTCATCGAGTCCGGACAGACCTATGATCGTCGTTCCATTCAGGAGTGGTTTAGTGCAGGAAACCAGATATGCCCGCAGACTCAACAAGTGCTCTCACACACAATTGTCATTCCTAACCACCTTGTTCGTACCATGATCTCACAGTGGTGCACAGAAAATGGGCTCACTCTGCCAGAAATTGAGAACCAAGAACAAGATCATGTTACCAACAGTGAGGAGAAAACATTTGATGAAATATTTGTCAAAATAACTTCCTCAGCAAACAGTGGTGGACGGAAGCAAGCAATCAAGGATCTTCGGCTTCTTACAAAACGTAACAGCGAATTCAGAGCTGTTTTAGGACAGAGACCAGATTCCATCGCACAGATGATCTTGGCACGGTCCACCCCAGGATTACAGAATGATCCACAGGTATTGGAGGACATGGTGACTATAATTCTCAACTTTTCAATCCATGATAGCAATAAGAAGATCATTGGAGATGATTCAGAAGCCATCCAATTTCTCATATGGGCACTGAAATCGGGAGATATGGGGAGCCGTAGCAACTCTGCAGCTGCCATCTTTACTCTGTCAGCTCTCGACTCAAACAAGGAGAAGATTGGCAAGTTAGGGGCAATGGATCCTTTGATTGATCTCCTTGAACATGGCAGCATCATAGCGAAGAAAGATGCGGCATCTGCGATTTTCAATCTTTGTCTGCTCCATGAGAACAGGTCAATAGCCGCAAGGAGCGGAATTGTCGATGTGGCGATGAGAGCCATCGATGATCAGTCCCTTGTTGAGGAGTCCTTAGCTATACTTGCTTTGCTATCAAGAAATCAAGAGATGGTGGAGATCATCACCGAGTTCAACGGTACCGCTTCCATGCTCCGTTCGATAAGGGAGAGTGAGTGCAAGCGCAGCAAAGAGAACGCGATGGTAGTTCTCTTCGCTATATGTACATACAACAGGACAAAGCTGAAGGAGGTCGAGGCAGATGAGAGCATAAACGGCTCCCTCACTTTTCTCGCACAAACTGGCACTCAAAGGGCAAGGAGGAAAGCTTCTGGGATCCTTGAGAAGATGAAGAGGACGATGCACAATAGGCATTGTTCATGTTAGCTCCAGCAACGAAGATGAAGCTGGAGGAACGATGAACAATGCATGAGGATGCTCATTTGATGTATATGTTGAGATACATATATAGCTATTTTCCTTTTTCAGTATATAGGAGATCCGCATATGCATAGATAATAGTAAAGAGTTTTTACTCGTTGGTCCTGCCTGTTTTTGGAATCTTGGTCATTTGAAACAGGCAGCCGAATGAATTTTTCTTCAGATTAGCAATCCTTCAGCATATGCTGAACACTATGAGTTTGCTTACTAAGACTCAGTCTGGAGATAATATCATTGCAGAGACCGCAATATTAGGCTTTTCAC
CDS Sequence
- >LOC_Os04g28100.1
ATGGCGAAGCCGGCGCCGGCGCCGGCGGCCGGGGCGCGGGAGGACGAGGACGCGCCGGCGCTGCGGAGGCGCCTGCGCAGGCTCGTGGCGGCGGCCACCGCCGGCGCCGCCTCGGAGTCCGTGCTCGACGAGGCCGCCGCGGCGCTCGCGGCGCTGCGGGATGCGGAGGTCGGCGTCGGGAGGAAGGGCGTCGGAGGAGGAGAGGAGGCGGCCGCCGCCGCCGTCCCGGCGCTGTTCCTGTGCCCGATCTCGTCCGGGATCATGAGGGACCCCGTCGTCATCGAGTCCGGACAGACCTATGATCGTCGTTCCATTCAGGAGTGGTTTAGTGCAGGAAACCAGATATGCCCGCAGACTCAACAAGTGCTCTCACACACAATTGTCATTCCTAACCACCTTGTTCGTACCATGATCTCACAGTGGTGCACAGAAAATGGGCTCACTCTGCCAGAAATTGAGAACCAAGAACAAGATCATGTTACCAACAGTGAGGAGAAAACATTTGATGAAATATTTGTCAAAATAACTTCCTCAGCAAACAGTGGTGGACGGAAGCAAGCAATCAAGGATCTTCGGCTTCTTACAAAACGTAACAGCGAATTCAGAGCTGTTTTAGGACAGAGACCAGATTCCATCGCACAGATGATCTTGGCACGGTCCACCCCAGGATTACAGAATGATCCACAGGTATTGGAGGACATGGTGACTATAATTCTCAACTTTTCAATCCATGATAGCAATAAGAAGATCATTGGAGATGATTCAGAAGCCATCCAATTTCTCATATGGGCACTGAAATCGGGAGATATGGGGAGCCGTAGCAACTCTGCAGCTGCCATCTTTACTCTGTCAGCTCTCGACTCAAACAAGGAGAAGATTGGCAAGTTAGGGGCAATGGATCCTTTGATTGATCTCCTTGAACATGGCAGCATCATAGCGAAGAAAGATGCGGCATCTGCGATTTTCAATCTTTGTCTGCTCCATGAGAACAGGTCAATAGCCGCAAGGAGCGGAATTGTCGATGTGGCGATGAGAGCCATCGATGATCAGTCCCTTGTTGAGGAGTCCTTAGCTATACTTGCTTTGCTATCAAGAAATCAAGAGATGGTGGAGATCATCACCGAGTTCAACGGTACCGCTTCCATGCTCCGTTCGATAAGGGAGAGTGAGTGCAAGCGCAGCAAAGAGAACGCGATGGTAGTTCTCTTCGCTATATGTACATACAACAGGACAAAGCTGAAGGAGGTCGAGGCAGATGAGAGCATAAACGGCTCCCTCACTTTTCTCGCACAAACTGGCACTCAAAGGGCAAGGAGGAAAGCTTCTGGGATCCTTGAGAAGATGAAGAGGACGATGCACAATAGGCATTGTTCATGTTAG
Protein Sequence
- >LOC_Os04g28100.1
MAKPAPAPAAGAREDEDAPALRRRLRRLVAAATAGAASESVLDEAAAALAALRDAEVGVGRKGVGGGEEAAAAAVPALFLCPISSGIMRDPVVIESGQTYDRRSIQEWFSAGNQICPQTQQVLSHTIVIPNHLVRTMISQWCTENGLTLPEIENQEQDHVTNSEEKTFDEIFVKITSSANSGGRKQAIKDLRLLTKRNSEFRAVLGQRPDSIAQMILARSTPGLQNDPQVLEDMVTIILNFSIHDSNKKIIGDDSEAIQFLIWALKSGDMGSRSNSAAAIFTLSALDSNKEKIGKLGAMDPLIDLLEHGSIIAKKDAASAIFNLCLLHENRSIAARSGIVDVAMRAIDDQSLVEESLAILALLSRNQEMVEIITEFNGTASMLRSIRESECKRSKENAMVVLFAICTYNRTKLKEVEADESINGSLTFLAQTGTQRARRKASGILEKMKRTMHNRHCSC*