Gene Details:
- MSU gene ID: LOC_Os04g13540
- RAPdb gene ID: Os04g0213100
- Gene Symbol: OsHFP
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- The possible role of OsHFP in regulating programmed cell death in anther green tissues of rice is proposed.
- Heterologous expression of OsHFP in green leaf tissues resulted in chlorophyll degradation; however, stable expression of OsHFP was observed in transgenic hairy roots, a non-green tissue.
- The expression of the single copy OsHFP gene was detected in rice flower buds.
Function-related keywords:
- cell-death , root , leaf , flower , anther
Literature:
- A structurally novel hemopexin fold protein of rice plays role in chlorophyll degradation . DOI: 10.1016/j.bbrc.2012.03.089 ; PMID: 22465006
Related News:
Gene Resources:
- NCBI ID: JX233809
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os04g13540.1
ATGAAGAATGCCCGCGCAGGTGTGCGGGTTATCTTCCTAGTTATTACAAAGATTGCAGGAAATAGAATCTCCAAAAACAGCAACCGAAAATATACAAGACGGAGACGGGTGAATACCATTCTGTACAGAAACAGGAATTTCAATCCTCAATCGCATCCATCGAGGAGGCTCAGAATCCAGAGCCCAGTGTGCCATTACATGGATGAAAACAATCAGAGGAAGAAACTAGTAATTCAGGACGTCCCAGAGCGGCAGTTGTCACCGGACGATGCAGATGATGAGGTGAATGAGTATTATACAGAGGGAGTCACTGATGTTGACAATTACATCGACTCAGCATTTCGCTCTACACGGAAGAACAAGGCCTATATTTTCATCAGGGAAGAGAATGTTGTCATGAACTACGGCCCTGCAACGAGAGATGACAAAATAATCAGCGGCCTAAGGTACATAGGCAATACTCTACAATCCCTTGTGGGCACTGCTTTCGCGGAGCACGGGATAGATGCCGCTTTTGCGTGCCATGACAACCATGGTTTTCTCTGTGCTCGAAGTGAAGCCATGATCTTCTCTGCAAATCTTTGCGCAAGGATAAACTTTGCACCGCGGACAACTAGGGATCGGATTATACAAGGTCCTAAAACCATTAGCCAAATGTTTCCCTTCTTCAAAGGGACCAGCTTTGAGAAGGGGATAGACGCTGCATTTGAATCCACTGTGACCGGGGAAGCCTACCTGTTCAAAGGCGCAGAGTTTGCTCTCATCAACTATTCCAGGCCAATCCTCATTGAGATACGACCCATTGTGGATGTGTTCAAGTGCTTCCGCGACTGCTACTTGTTTGCAACAGATATTGGAGCTGCCCTTGCCTCGCATGTGTCGAAAGACGTTTACCTTTTCAAGGAAAACGACTATCTTTTGTTTCACTTGACCCCTGGGGAAACCAACCACTATATCATTGGAGGACCTAAGGAGATTGTTCCTAGAAACTGGCCCTCATTGAAGGGCATCCTGCCCCGGAAGAACAAGGCACTAGACATTTACGAGTCTCTCCAACCAAACCCTGTGCGCGACCAGGATGACTAG
CDS Sequence
- >LOC_Os04g13540.1
ATGAAGAATGCCCGCGCAGGTGTGCGGGTTATCTTCCTAGTTATTACAAAGATTGCAGGAAATAGAATCTCCAAAAACAGCAACCGAAAATATACAAGACGGAGACGGGTGAATACCATTCTGTACAGAAACAGGAATTTCAATCCTCAATCGCATCCATCGAGGAGGCTCAGAATCCAGAGCCCAGTGTGCCATTACATGGATGAAAACAATCAGAGGAAGAAACTAGTAATTCAGGACGTCCCAGAGCGGCAGTTGTCACCGGACGATGCAGATGATGAGGTGAATGAGTATTATACAGAGGGAGTCACTGATGTTGACAATTACATCGACTCAGCATTTCGCTCTACACGGAAGAACAAGGCCTATATTTTCATCAGGGAAGAGAATGTTGTCATGAACTACGGCCCTGCAACGAGAGATGACAAAATAATCAGCGGCCTAAGGTACATAGGCAATACTCTACAATCCCTTGTGGGCACTGCTTTCGCGGAGCACGGGATAGATGCCGCTTTTGCGTGCCATGACAACCATGGTTTTCTCTGTGCTCGAAGTGAAGCCATGATCTTCTCTGCAAATCTTTGCGCAAGGATAAACTTTGCACCGCGGACAACTAGGGATCGGATTATACAAGGTCCTAAAACCATTAGCCAAATGTTTCCCTTCTTCAAAGGGACCAGCTTTGAGAAGGGGATAGACGCTGCATTTGAATCCACTGTGACCGGGGAAGCCTACCTGTTCAAAGGCGCAGAGTTTGCTCTCATCAACTATTCCAGGCCAATCCTCATTGAGATACGACCCATTGTGGATGTGTTCAAGTGCTTCCGCGACTGCTACTTGTTTGCAACAGATATTGGAGCTGCCCTTGCCTCGCATGTGTCGAAAGACGTTTACCTTTTCAAGGAAAACGACTATCTTTTGTTTCACTTGACCCCTGGGGAAACCAACCACTATATCATTGGAGGACCTAAGGAGATTGTTCCTAGAAACTGGCCCTCATTGAAGGGCATCCTGCCCCGGAAGAACAAGGCACTAGACATTTACGAGTCTCTCCAACCAAACCCTGTGCGCGACCAGGATGACTAG
Protein Sequence
- >LOC_Os04g13540.1
MKNARAGVRVIFLVITKIAGNRISKNSNRKYTRRRRVNTILYRNRNFNPQSHPSRRLRIQSPVCHYMDENNQRKKLVIQDVPERQLSPDDADDEVNEYYTEGVTDVDNYIDSAFRSTRKNKAYIFIREENVVMNYGPATRDDKIISGLRYIGNTLQSLVGTAFAEHGIDAAFACHDNHGFLCARSEAMIFSANLCARINFAPRTTRDRIIQGPKTISQMFPFFKGTSFEKGIDAAFESTVTGEAYLFKGAEFALINYSRPILIEIRPIVDVFKCFRDCYLFATDIGAALASHVSKDVYLFKENDYLLFHLTPGETNHYIIGGPKEIVPRNWPSLKGILPRKNKALDIYESLQPNPVRDQDD*