Gene Details:
- MSU gene ID: LOC_Os04g02510
- RAPdb gene ID: Os04g0115500
- Gene Symbol: OsTIF1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- IAA also facilitated OsTIF1 translocation from the endoplasmic reticulum (ER) to the nucleus by releasing the interaction of OsTIF1 with OsAsp1 to regulate caryopses IAA levels via a feedback loop.
Function-related keywords:
Literature:
- Auxin apical dominance governed by the OsAsp1-OsTIF1 complex determines distinctive rice caryopses development on different branches . DOI: 10.1371/journal.pgen.1009157 ; PMID: 33108367
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os04g02510.1
AACTAGGAGAGAAGAAAATTTATTAGTACCACCTCGCTTACCAAGCTAGTATCCCCTCCCCTCCCATGGCGCTCTCCACTCTCCTCCTCCCCTCCTCCTCCTCTTCCTCCTCCAAGACGGCCACTGCCACCGACACCTCCGACCGCCGCCGCCACCACCACCACCACAACCACACCAAGCGCAAGAAGAAGCCGCCGCCGCCGCCGCTCTCACCGACGCCGAGAACGCCGCCGCCTGCAGGGAGTGGAAGCCACCGCGCCATGGCCGCGTCGTCCAAGAAGAGCACCAAGCAGGTCGTCGTCGCGGCCAAGACGACGACCGGCCACCGCCCCAAGAAGGCGGCGGCGGCGCCGACGACGCCGTCTCGTGGTGCGCCGTCGGCGTCGGCCGCGCCGGTGTCGTCGTCGTGGGAGCAGCTGAAGAGCCTGCTGAGCTGCCGGAGCGCGACGGCGGCGGCGCGCGTGCACGACCCCGCCGCGCCGTCGTCCGCGTTGTCGCGGCTCCGCAGCCACGGCGCCGGCGCGTGCGGCGCGTCGCTCTGCGCCATCCGCGACGTGGTCGACGCCGCCAGCTCCGCCTCCGCGGCGTCCACCGCCGCCGCGTCCCTCGACCGCGACACCACCCCGCTCACCCGCTCCTCCCGCCGCGCCCACCGCGCCGCCACCTCCTCCTCCGGCGGCGGCGGCGGCCACCACGCCTCCCTCCGTGGCCTCTCCGGTTGCTACGAGTGCCGCGCCATCAACGTCGAGCCCATGTCAAGGAGGTATCCGAGGCCACGGGAGCTGTGCGCATGCTCGCAGTGTGGGGAGGTGTTCAACAAGGCCGACAGCTTGGAGCACCACCAAGCCATTCGCCATGCTGTGTCGGAGCTGGGGCCGGAGGACTCGGGGCGAAACATCGTGGAGATAATCTTCAAGTCGAGCTGGCAGAAGCGCGACCGTCCGATCTGCCAGATCGACCGCATCCTCAAGGTGCACAACGCGGCGCGCACCGTGGCGCGCTTCGAGGCCTACCGCGACGCCGTCCGCACCCGCTGCCGCGCCACCGCCGCCCGCGCCGCCGCCGACGGCAACGAGCTCCTCCGCTTCCACCCCGCCGCCCTCGCCTGCCCGCTCGGCCTCAACGGCGCCACCTCGCTCTGCGACGACGACGACGCCTGCGGCGTGTGCGCGGCGATCCGGCACGGGTTCGCGCCGTGGGCGGGCGCGCACCCGCTCGGCGTGCGCACCACGGCGAGCAGCGGCCGCGCGCACGACTGCGGCGCGGCGGCGGCGGCGGCGCAGCAGGCGGGCGGGTGCCGGGCAATGCTGGTGTGCCGCGTAATCGCCGGCCGTGTCCGCCGGAACGACGACGATGGCGGTGCGGAGGAGGAGGAGGGAGCGTTCGACTCGGTGGCCGGCGACGAGGCGGCGAGCAGCGTGTACGGCAACCTGGAGGAGCTGTTCGTGGCGAACCCAAGGGCCATACTGCCGTGCTTCGTCGTCATCTACCGTGTTGTCCCCGAGTGAAGCAGCAAACAACACTCAAAATCAATTAATTGTATCAACCTTTTGTATTAGCATAATCGTCCAGCAATTTCAACATCATATAAATGTATAAATTAAATGCATTTTGAGGGAGAGATGAACTTAATTTTTGTCTAGTTGCTGTTCCAGTGTAGTATCTGTTTGTATTGTAGTGTTGTATATATGGACAAATAATTAAGCCACTTGATTAGACAAATCTTCGATCT
CDS Sequence
- >LOC_Os04g02510.1
ATGGCGCTCTCCACTCTCCTCCTCCCCTCCTCCTCCTCTTCCTCCTCCAAGACGGCCACTGCCACCGACACCTCCGACCGCCGCCGCCACCACCACCACCACAACCACACCAAGCGCAAGAAGAAGCCGCCGCCGCCGCCGCTCTCACCGACGCCGAGAACGCCGCCGCCTGCAGGGAGTGGAAGCCACCGCGCCATGGCCGCGTCGTCCAAGAAGAGCACCAAGCAGGTCGTCGTCGCGGCCAAGACGACGACCGGCCACCGCCCCAAGAAGGCGGCGGCGGCGCCGACGACGCCGTCTCGTGGTGCGCCGTCGGCGTCGGCCGCGCCGGTGTCGTCGTCGTGGGAGCAGCTGAAGAGCCTGCTGAGCTGCCGGAGCGCGACGGCGGCGGCGCGCGTGCACGACCCCGCCGCGCCGTCGTCCGCGTTGTCGCGGCTCCGCAGCCACGGCGCCGGCGCGTGCGGCGCGTCGCTCTGCGCCATCCGCGACGTGGTCGACGCCGCCAGCTCCGCCTCCGCGGCGTCCACCGCCGCCGCGTCCCTCGACCGCGACACCACCCCGCTCACCCGCTCCTCCCGCCGCGCCCACCGCGCCGCCACCTCCTCCTCCGGCGGCGGCGGCGGCCACCACGCCTCCCTCCGTGGCCTCTCCGGTTGCTACGAGTGCCGCGCCATCAACGTCGAGCCCATGTCAAGGAGGTATCCGAGGCCACGGGAGCTGTGCGCATGCTCGCAGTGTGGGGAGGTGTTCAACAAGGCCGACAGCTTGGAGCACCACCAAGCCATTCGCCATGCTGTGTCGGAGCTGGGGCCGGAGGACTCGGGGCGAAACATCGTGGAGATAATCTTCAAGTCGAGCTGGCAGAAGCGCGACCGTCCGATCTGCCAGATCGACCGCATCCTCAAGGTGCACAACGCGGCGCGCACCGTGGCGCGCTTCGAGGCCTACCGCGACGCCGTCCGCACCCGCTGCCGCGCCACCGCCGCCCGCGCCGCCGCCGACGGCAACGAGCTCCTCCGCTTCCACCCCGCCGCCCTCGCCTGCCCGCTCGGCCTCAACGGCGCCACCTCGCTCTGCGACGACGACGACGCCTGCGGCGTGTGCGCGGCGATCCGGCACGGGTTCGCGCCGTGGGCGGGCGCGCACCCGCTCGGCGTGCGCACCACGGCGAGCAGCGGCCGCGCGCACGACTGCGGCGCGGCGGCGGCGGCGGCGCAGCAGGCGGGCGGGTGCCGGGCAATGCTGGTGTGCCGCGTAATCGCCGGCCGTGTCCGCCGGAACGACGACGATGGCGGTGCGGAGGAGGAGGAGGGAGCGTTCGACTCGGTGGCCGGCGACGAGGCGGCGAGCAGCGTGTACGGCAACCTGGAGGAGCTGTTCGTGGCGAACCCAAGGGCCATACTGCCGTGCTTCGTCGTCATCTACCGTGTTGTCCCCGAGTGA
Protein Sequence
- >LOC_Os04g02510.1
MALSTLLLPSSSSSSSKTATATDTSDRRRHHHHHNHTKRKKKPPPPPLSPTPRTPPPAGSGSHRAMAASSKKSTKQVVVAAKTTTGHRPKKAAAAPTTPSRGAPSASAAPVSSSWEQLKSLLSCRSATAAARVHDPAAPSSALSRLRSHGAGACGASLCAIRDVVDAASSASAASTAAASLDRDTTPLTRSSRRAHRAATSSSGGGGGHHASLRGLSGCYECRAINVEPMSRRYPRPRELCACSQCGEVFNKADSLEHHQAIRHAVSELGPEDSGRNIVEIIFKSSWQKRDRPICQIDRILKVHNAARTVARFEAYRDAVRTRCRATAARAAADGNELLRFHPAALACPLGLNGATSLCDDDDACGVCAAIRHGFAPWAGAHPLGVRTTASSGRAHDCGAAAAAAQQAGGCRAMLVCRVIAGRVRRNDDDGGAEEEEGAFDSVAGDEAASSVYGNLEELFVANPRAILPCFVVIYRVVPE*