Information report for OsKu80;Ku80
Gene Details
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Functional Descriptions
- Suppression of OsKu80 results in defects in developmental growth and increased telomere length in rice (Oryza sativa L.).
- These results are discussed with the idea that OsKu80 plays a role in developmental growth and telomere length regulation in rice plants.
Functional Keywords
Literature and News
- Suppression of Ku70/80 or Lig4 leads to decreased stable transformation and enhanced homologous recombination in rice . DOI: 10.1111/j.1469-8137.2012.04350.x ; PMID: 23050791
- Suppression of OsKu80 results in defects in developmental growth and increased telomere length in rice (Oryza sativa L.) . DOI: 10.1016/j.bbrc.2015.11.044 ; PMID: 26590017
Gene Resources
- UniProt: Q75IP6
- EMBL: AC128647, AP008209, AP014959
- AlphaFoldDB: Q75IP6
- KEGG: dosa:Os03g0856200
- InterPro: IPR005160, IPR005161, IPR006164
- PANTHER: PTHR12604, PTHR12604:SF4
- SUPFAM: SSF100939, SSF101420, SSF53300
- Gene3D: 1.10.1600.10, 1.25.40.240, 2.40.290.10
- OrthoDB: Q75IP6
- SWISS-MODEL: Q75IP6
- Conserved Domain Database: cd00873
- eggNOG: KOG2326
Sequences
cDNA Sequence
- >LOC_Os03g63920.1
AGAAGTTCCAGTGTTGCAGCCAAGTCGGAAGTCGCCATTCGTCTTCTCTCTCTCTCTCTCCGCGCCGGCAAAGCGGCCGGTGGCGGCGCCGACGAGTCAGCAAGCGGCAGCGCGGAAGTCGACGGCCGCGAGAGTGGGAGGCGGCCGGTCGGTGATCGAGTGCGGAAGTCTTGGTGAAGGCCCACCGCGTCGCGTCCGTGTCCTCCTCGAGCCGCGTCGTCGTCGACCTCCTTCAATTCCCTCATGGCTCGCAACAAGGAAGCATTGGTTTTGCTATTGGATGTTGGCCCATCCATGCATGGCGTTCTGCAAGAAGTTGAGAATATCTGCTCCACCCTTGTGCATAAGAAGCTAGTTTATAATAGGAGTGATGAGATCGGTGTTGTCCTTTTTGGAACTAAAGAAACAAGCAACGAACTCGCCAAGGAGCTTGGGGGCTATAAGCATGTGGTGGTTGCTCGTGATATTAAAGTTGTTGATGAAGAAACAACAAATGCTCTGCAAAACCTTCCAAGGGGAACTTCCCCTGGTGACTTTTTGGATGCTATTGTTGTTGGTTTGGATATGCTGATAAGAAAATTTGGAAATATCAAAGGAAAACAGCGTATGTGTCTAGTCACTGATGCACAACATCCATTAAGAGATCCACCCCAAGGGACAAAAAAGGATCAGGTGGACACTATTGCAGACCAGATGAAAAGACACGAAATCAAGATGGACTGCATTATTTTCAGAGAATCTGGAGTTCGTCACAATGCTGTAATGGATGAAAACGACCAATTATTATACCACTTCAGAGAGAGGTCAGTAACAAAGGTAGTTCATGTTGACAGCCCAACGTCACTCTTAGGTGCTCTCAGGACTAGAAATGTACTTCCAGTTACTGTCTTCAGGGGAGACTTGGAAGTGAGCTCTAGCTTTAAAATAAAGGTGTGGGTCTATAAGAAAACATCTGAGGAGAAATTCCCCACTTTGAAGAAGTATTCTGATAAGGCTCCTGCAAGTGATAAATTTGCATCTCATGAAGTCAAAGTGGATTATGAGTACAAAAGTGTTCTAGAACCAGACACAGTCGTTCCACCAGATCAAAGAATTAAAGGATATCTTTATGGTCCACAAGTTGTTCCTATATCATCCGCTGAATGGGAAGCTGTCAAGTTCAAACCTGAGAAAGGTGTGAAGCTTCTAGGTTTTACAGATAGATCCAGCATATCTCGGCACTATTTTATGAAAGATGTGTTCTCCTTTGTTCCGGAACCAGGAAACACAAAAGCAGTTGCTGCCGTTTCTGCCTTAGCTAGAGCAATGAGTGAAATGAACAAGGTTGCAATTTTACGATGCGTGTGGAGGCAAGGTCAAGGGAATGTTGCTTTGGGTGTATTGACACCAAACATATCATCAGCAAAAAATGTTCTGGATTCCTTTTACTTCAATATACTTCCATTTGCTGAGGACATCAGAGAGTTTCAGTTTCGGTCCTTCAGCAGCCTGCCATCATCATCTCAGCCTACCAAGGAACAGCAGGAAGCTGCAGATAACCTGGTAAAGATGTTAGATCTTGCACCACCTGGAAGGGAAGAGATCCTTAAGCCTGATTTCACTCCGAATCCCATGTTGGAGAGATTCTACAGGTACCTTGATCTCAAGTCAAAGCAGCCGGATGCAAATGTCCCACCCCTCGACAAATGTCTAAAGAAGATAACTGAACCTGATCCTGATGTCATTGATTATCAAGCACCGCTAATAAAAAAATTAGGCAATGTATTTGAGCTGAAGGAGAACCCCAAGAAAAAGAAAGCACGGACACAGGACAGATTGACTTATACTGGCGCAGACGATCAGGCTAAATTATTAGAAGAACCTTCTGCAGAGAAGGTTGGGGTTTCGGAAGCTTTATATCCTCCAAAAAAGAAGGCTGGGGAGATTGGCGATCATAATCCTGTTCAAGATTTTGAAGCCATGCTGACACAGAGATCTAGCTCAACGTGGGTTCAGACGGCAATTGAAGAGATGCAGAAGTACATAACCGCTTTAATACAGGATTCCTGTGATCGGGATAATCACCAAAAGGCACTGGAGTGCCTTGTTGCTTTACGGAAGGCCTGCATTATTGAACAGGAACCAAACGAATACAATGGATTCGTAACAAAGCTCTGTCAGAAATTTAGGCCGGCTGGTGATAAAATTTTTTTGCAGCTTCTTTCGTCCAAGAAAGCTTCGCTTATAAGCAAAGAAGAAGCACCTGATAGCGATGTGACGGAAGAGATGGCGAGAAACTTCTGTCTGAAACCCGAGCCGTCCTCTCAGTAGCCGAGACTGCAGGCATGGATGTGGATGGCTTTGAGTTCTGAAGGCCTGGAAGCTAGGTAAAAGAGGAACTGGAAGACATCGAACGGCCCTAGTACTAATTTCTAACGTACGCCTGGTTAAAATGTTATGTAGCTCGGTTTTTGGAAAGCTCTGTGTCATGTGAGTGATGAGCAACACGAGCTACTATTGTTTTCGAATGGATATGTATGTTGGGATGGAAAAATCCCAGATGAAATGTAAAAGACTTGCAGTTTGAGATGTCCCAAGCTCCAAGACTTCAATTCCTCACCTCCAGAAGCTCTGAACTTAAAATTCAGCGTTTCTGCGGCCGATATCAGCATTCTTTGCGTGACATAGGGAACACACTCTGGCGATCAGCCTCAGGGTCAGGGAAAGAACACTTACTCATTCC
CDS Sequence
- >LOC_Os03g63920.1
ATGGCTCGCAACAAGGAAGCATTGGTTTTGCTATTGGATGTTGGCCCATCCATGCATGGCGTTCTGCAAGAAGTTGAGAATATCTGCTCCACCCTTGTGCATAAGAAGCTAGTTTATAATAGGAGTGATGAGATCGGTGTTGTCCTTTTTGGAACTAAAGAAACAAGCAACGAACTCGCCAAGGAGCTTGGGGGCTATAAGCATGTGGTGGTTGCTCGTGATATTAAAGTTGTTGATGAAGAAACAACAAATGCTCTGCAAAACCTTCCAAGGGGAACTTCCCCTGGTGACTTTTTGGATGCTATTGTTGTTGGTTTGGATATGCTGATAAGAAAATTTGGAAATATCAAAGGAAAACAGCGTATGTGTCTAGTCACTGATGCACAACATCCATTAAGAGATCCACCCCAAGGGACAAAAAAGGATCAGGTGGACACTATTGCAGACCAGATGAAAAGACACGAAATCAAGATGGACTGCATTATTTTCAGAGAATCTGGAGTTCGTCACAATGCTGTAATGGATGAAAACGACCAATTATTATACCACTTCAGAGAGAGGTCAGTAACAAAGGTAGTTCATGTTGACAGCCCAACGTCACTCTTAGGTGCTCTCAGGACTAGAAATGTACTTCCAGTTACTGTCTTCAGGGGAGACTTGGAAGTGAGCTCTAGCTTTAAAATAAAGGTGTGGGTCTATAAGAAAACATCTGAGGAGAAATTCCCCACTTTGAAGAAGTATTCTGATAAGGCTCCTGCAAGTGATAAATTTGCATCTCATGAAGTCAAAGTGGATTATGAGTACAAAAGTGTTCTAGAACCAGACACAGTCGTTCCACCAGATCAAAGAATTAAAGGATATCTTTATGGTCCACAAGTTGTTCCTATATCATCCGCTGAATGGGAAGCTGTCAAGTTCAAACCTGAGAAAGGTGTGAAGCTTCTAGGTTTTACAGATAGATCCAGCATATCTCGGCACTATTTTATGAAAGATGTGTTCTCCTTTGTTCCGGAACCAGGAAACACAAAAGCAGTTGCTGCCGTTTCTGCCTTAGCTAGAGCAATGAGTGAAATGAACAAGGTTGCAATTTTACGATGCGTGTGGAGGCAAGGTCAAGGGAATGTTGCTTTGGGTGTATTGACACCAAACATATCATCAGCAAAAAATGTTCTGGATTCCTTTTACTTCAATATACTTCCATTTGCTGAGGACATCAGAGAGTTTCAGTTTCGGTCCTTCAGCAGCCTGCCATCATCATCTCAGCCTACCAAGGAACAGCAGGAAGCTGCAGATAACCTGGTAAAGATGTTAGATCTTGCACCACCTGGAAGGGAAGAGATCCTTAAGCCTGATTTCACTCCGAATCCCATGTTGGAGAGATTCTACAGGTACCTTGATCTCAAGTCAAAGCAGCCGGATGCAAATGTCCCACCCCTCGACAAATGTCTAAAGAAGATAACTGAACCTGATCCTGATGTCATTGATTATCAAGCACCGCTAATAAAAAAATTAGGCAATGTATTTGAGCTGAAGGAGAACCCCAAGAAAAAGAAAGCACGGACACAGGACAGATTGACTTATACTGGCGCAGACGATCAGGCTAAATTATTAGAAGAACCTTCTGCAGAGAAGGTTGGGGTTTCGGAAGCTTTATATCCTCCAAAAAAGAAGGCTGGGGAGATTGGCGATCATAATCCTGTTCAAGATTTTGAAGCCATGCTGACACAGAGATCTAGCTCAACGTGGGTTCAGACGGCAATTGAAGAGATGCAGAAGTACATAACCGCTTTAATACAGGATTCCTGTGATCGGGATAATCACCAAAAGGCACTGGAGTGCCTTGTTGCTTTACGGAAGGCCTGCATTATTGAACAGGAACCAAACGAATACAATGGATTCGTAACAAAGCTCTGTCAGAAATTTAGGCCGGCTGGTGATAAAATTTTTTTGCAGCTTCTTTCGTCCAAGAAAGCTTCGCTTATAAGCAAAGAAGAAGCACCTGATAGCGATGTGACGGAAGAGATGGCGAGAAACTTCTGTCTGAAACCCGAGCCGTCCTCTCAGTAG
Protein Sequence
- >LOC_Os03g63920.1
MARNKEALVLLLDVGPSMHGVLQEVENICSTLVHKKLVYNRSDEIGVVLFGTKETSNELAKELGGYKHVVVARDIKVVDEETTNALQNLPRGTSPGDFLDAIVVGLDMLIRKFGNIKGKQRMCLVTDAQHPLRDPPQGTKKDQVDTIADQMKRHEIKMDCIIFRESGVRHNAVMDENDQLLYHFRERSVTKVVHVDSPTSLLGALRTRNVLPVTVFRGDLEVSSSFKIKVWVYKKTSEEKFPTLKKYSDKAPASDKFASHEVKVDYEYKSVLEPDTVVPPDQRIKGYLYGPQVVPISSAEWEAVKFKPEKGVKLLGFTDRSSISRHYFMKDVFSFVPEPGNTKAVAAVSALARAMSEMNKVAILRCVWRQGQGNVALGVLTPNISSAKNVLDSFYFNILPFAEDIREFQFRSFSSLPSSSQPTKEQQEAADNLVKMLDLAPPGREEILKPDFTPNPMLERFYRYLDLKSKQPDANVPPLDKCLKKITEPDPDVIDYQAPLIKKLGNVFELKENPKKKKARTQDRLTYTGADDQAKLLEEPSAEKVGVSEALYPPKKKAGEIGDHNPVQDFEAMLTQRSSSTWVQTAIEEMQKYITALIQDSCDRDNHQKALECLVALRKACIIEQEPNEYNGFVTKLCQKFRPAGDKIFLQLLSSKKASLISKEEAPDSDVTEEMARNFCLKPEPSSQ*