Gene Details:
- MSU gene ID: LOC_Os03g63010
- RAPdb gene ID: Os03g0847500
- Gene Symbol: PTOX1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Using Ecotype Targeting Induced Local Lesions IN Genomes (EcoTILLING) and TILLING as forward genetic tools, we identified the causative mutation of an EMS mutant characterized by excessive tillering, semi-dwarfism and leaf variegation that corresponded to the PTOX1 gene.
- The tillering and semi-dwarf phenotypes of the PTOX1 mutant are similar to phenotypes of known strigolactone (SL)-related rice mutants, and both phenotypic traits could be rescued by application of the synthetic SL GR24.
- The PTOX1 mutant accumulated phytoene in white leaf sectors with a corresponding deficiency in beta-carotene, consistent with the expected function of PTOX1 in promoting phytoene desaturase activity.
Function-related keywords:
- tiller , strigolactone , tillering , leaf , dwarf
Literature:
- The tillering phenotype of the rice plastid terminal oxidase (PTOX) loss-of-function mutant is associated with strigolactone deficiency . DOI: 10.1111/nph.12630 ; PMID: 24350905
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os03g63010.1
TTTTTTACACTATGGGTTCCACCTGGTTCACACGCGCGGGGGCGGCGGACGGAGGGAGGGACGGCGCCGCTCGGGAGAGGGAGCGGGAGCGCGTGCGTCGCCGGTGGCCGAGCCGAGCCGAGCTGCGTCGCGGTGGTGCTCTCCGCGGGCGGCGAGATTCAGCCCTGACCCGAGGAAGGTGAGGGGAATTCTTCCTCGGGGGTGGGTTTGGTGCATTCCGTGGTGTGAGATGCGGGGGATGAACAAGGCTTTCGGGGTTTGGGATGTCGCGGGGATTTGGGGGCGGTGGGTGGTTTTCGGCTGGGAATTTGCGGATTTCGTGGCTGCTAGTGGTGTTCCCGTGGCTTTACGAACAGATGTATATGCTTGATCTCGTGCGGCTTTCCCTTCTATCCCTCTCTCCATGGTTTGCTCGCGTTGGGGGGTTTCGAAAAATTTTCCCTACTGTTAGTCCTCGATTCTGGTCGTCGGCATGGTGGCGGTCGCCTCCGCCTCCCCGCTCACCGCCGCGGCGGCGCCCTCCATGTGCTGCTCGCCGCCCGCCTTCCTCCCTCTCCGTGCGCACCGCAGGAGGATTTTCCGCGCGGAGGCGATGAAGACGCAGCAGGAGAAGAAGCAGACCGAGGTGGCCGTCGAGGAGTCCTTCCCCTTCAGGGAGACGGCTCCTCCTGATGAGCCGCTGGTCACCGCCGAGGAGAGCTGGGTGGTTAAGCTCGAACAGTCTGTGAACATTTTCCTCACGGAGTCAGTCATCACGATACTTGATGGATTGTACCGTGACCGCAACTACGCTAGATTTTTCGTCTTGGAGACGATTGCTAGGGTGCCGTATTTTGGTGAGGATCTCGTCGTACATGCTCGCTATAGCCTGCAGCGTTTATCTCTATGCTTCACATGTATGAAACATTTGGCTGGTGGAGGAGAGCTGATTATATAAAGGTGCACTTTGCTGAGAGCTGGAATGAGTTCCATCACCTCTTAATCATGGAAGTACGTCTCTAGCTCTTTCTGTCTGCACATCAGTGCATTTATATATGCTGTTTCTTCCTGTTTTGATGTCCTTTTAGATTATGTTAGCTGTTAGCATATCCCGTTTTCTTTAACTGAATATAATCTTTAAAGGAATTCAACCTACTGCTTATTGACACATTATCTGTTTTTTTTTAATATTTTGGTTATGGTCTTTGATGTTCTGACTTTATTCCTCATCTTGGTTCATATTAGGAATTGGGTGGCAACTCTTTATGAGTTGATCGTTTTCTTGCATGGTTTGCTGCATTTTTTTACTACTTCATGACTGTTGCGATGTCACGAGCCCCGGCGTAAGAACGTATGGGATATGAATGTGTGATTGGCGGTGGACGAGGGGGTTTGGTGGAACGACGACCCGTGATGAACAGCAAGGGATGAGCAAATAGAGAATAGGAGATGAGAGAACTAGAGATTGAATCTGCTTAATTAAACGCCACCGAAACTGTGCCTCTAAATAGGCGTACACGAATTAACCAATGTGCTAAAAACAAGCTAACAAACTGATAAACAGACTAACAATCTGAACTCATCCAATCGCCGCACTGTAGTCATCCGGCACGCAGCTTCCGCGCGCTACTCCGCCGTTCCGCCCGGCGACGCTTGCGGAACCACACGCCCTCTGCGACGATACGTAATCCCGACCATGACATGCGATGTACATGGTGAGCCCAAGAATGGCATGTAAGTGTGCACCTATGCCAATTATGAAGTAAAACACTTCATTTTTATTTCCATGCCTTTTATGTAATGATAACGCTTGGAATTGTTTATCTTATATACATACCGCTTTTCTGAATGTGTTGAGAGGCATGCGTACTCAACCTATGACAAGTTTATTAAGCTCCATGAAGGTAATAAAACGTTGATGGATTTGACATCTCTCCTGTCGTGCAAAATTTTATCATGACAACTAGACATCTCAAAATTTTTGTTGCTTTATCTAGGTTGGACAGACTTTGTAAACCAAAGTGGAAATGAGGGGACCGGGAAAACTAAGTATTTACTTTTTTTATAGGGATAAGTTTATGCCTACCTTTTGTCACAGATTGCCCTTGTGTGAATAATTTGATACATGCGCCAGTGAACTTATGTTATATCAGCTATTTACTTCAATTATTGGCAATCAGGATTCAGGCATGGTGTTTATTTTAGTTTTATAGGTATCGTGTGCATAAATTCAAAAACATGTATTATTCTTCCATTTTTGATTAAGATGTCGGCTCTGGTATCCTTTTATGATGTACTATATTTAGATTTTTTTTCCGTCCTACATAGTGGTTACTTGAATTGTGGGAGAGTTGAAACATACCTGAAAAAATTAGCAAAGCTAGATCCCCTAAGGTCTGAACACCAAACTGGTAGACTCTTTGCATTACTATCCATTCAGAAGTTGATGCATTGTACATTTTAAAGGGTGCATTTTAATAAACCAAAATGTTGAACACTGCAACCAATAACACCATGTCTACCCGACCTGTCCACCAACTAGAAATTTACAGGAACATCACACTCTGTCAATTATATTTACGTATTTCTTGGCAAAATAACATCCTGATCTGACCTTTGACTGCAGAAATGTAGCTGATGCCATGCCTGCATGCCACCCATGAGTGGCATACCTAATATCAATATCAAGGAATGACTTCCTGTAGTGCTCTTCTTCCTTGAGAGCACACGCAATAAGCTATCAAAGAGTATACAGCTTTTCCAAGAAAACGAAAGGGAACGACAGAGAATTGCCACTCTCTAACCCAAGAAATATCACAGTTGCAAGATCTTGGCAGCACACTTATTGAGTTGTGGAACCTAATGGACACACCAACTGCTGAACAGAAATGCTTTGACCATGTTACGTCTTTGATTTCAGTCTCACCAAATACAAAAATGCCCCAAGGATGCCTTGCACGTGAACTTATTGAGAAGTTTACAATTGATCGACCATTTTATGTTCTTTTGCTTTATTTGGATTGTCATTGAAGCTAACTTAATTTTTCTGTAAAATCCGGTTGAGGTTAAGAGGTTGAATTCTTCTGATCATTGTCAATACAACTATAGCGATTCATTGAGGGTAAGAGCTCACATAACTTTTATGTGCTTTACT - >LOC_Os03g63010.2
TTTTTTACACTATGGGTTCCACCTGGTTCACACGCGCGGGGGCGGCGGACGGAGGGAGGGACGGCGCCGCTCGGGAGAGGGAGCGGGAGCGCGTGCGTCGCCGGTGGCCGAGCCGAGCCGAGCTGCGTCGCGGTGGTGCTCTCCGCGGGCGGCGAGATTCAGCCCTGACCCGAGGAAGGTGAGGGGAATTCTTCCTCGGGGGTGGGTTTGGTGCATTCCGTGGTGTGAGATGCGGGGGATGAACAAGGCTTTCGGGGTTTGGGATGTCGCGGGGATTTGGGGGCGGTGGGTGGTTTTCGGCTGGGAATTTGCGGATTTCGTGGCTGCTAGTGGTGTTCCCGTGGCTTTACGAACAGATGTATATGCTTGATCTCGTGCGGCTTTCCCTTCTATCCCTCTCTCCATGGTTTGCTCGCGTTGGGGGGTTTCGAAAAATTTTCCCTACTGTTAGTCCTCGATTCTGGTCGTCGGCATGGTGGCGGTCGCCTCCGCCTCCCCGCTCACCGCCGCGGCGGCGCCCTCCATGTGCTGCTCGCCGCCCGCCTTCCTCCCTCTCCGTGCGCACCGCAGGAGGATTTTCCGCGCGGAGGCGATGAAGACGCAGCAGGAGAAGAAGCAGACCGAGGTGGCCGTCGAGGAGTCCTTCCCCTTCAGGGAGACGGCTCCTCCTGATGAGCCGCTGGTCACCGCCGAGGAGAGCTGGGTGGTTAAGCTCGAACAGTCTGTGAACATTTTCCTCACGGAGTCAGTCATCACGATACTTGATGGATTGTACCGTGACCGCAACTACGCTAGATTTTTCGTCTTGGAGACGATTGCTAGGGTGCCGTATTTTGGTGAGGATCTCGTCGTACATGCTCGCTATAGCCTGCAGCGTTTATCTCTATGCTTCACATGTATGAAACATTTGGCTGGTGGAGGAGAGCTGATTATATAAAGGTGCACTTTGCTGAGAGCTGGAATGAGTTCCATCACCTCTTAATCATGGAAGTACGTCTCTAGCTCTTTCTGTCTGCACATCAGTGCATTTATATATGCTGTTTCTTCCTGTTTTGATGTCCTTTTAGATTATGTTAGCTGTTAGCATATCCCGTTTTCTTTAACTGAATATAATCTTTAAAGGAATTCAACCTACTGCTTATTGACACATTATCTGTTTTTTTTTAATATTTTGGTTATGGTCTTTGATGTTCTGACTTTATTCCTCATCTTGGTTCATATTAGGAATTGGGTGGCAACTCTTTATGAGTTGATCGTTTTCTTGCATGGTTTGCTGCATTTTTTTACTACTTCATGACTGTTGCGATGTCACGAGCCCCGGCGTAAGAACGTATGGGATATGAATGTGTGATTGGCGGTGGACGAGGGGGTTTGGTGGAACGACGACCCGTGATGAACAGCAAGGGATGAGCAAATAGAGAATAGGAGATGAGAGAACTAGAGATTGAATCTGCTTAATTAAACGCCACCGAAACTGTGCCTCTAAATAGGCGTACACGAATTAACCAATGTGCTAAAAACAAGCTAACAAACTGATAAACAGACTAACAATCTGAACTCATCCAATCGCCGCACTGTAGTCATCCGGCACGCAGCTTCCGCGCGCTACTCCGCCGTTCCGCCCGGCGACGCTTGCGGAACCACACGCCCTCTGCGACGATACGTAATCCCGACCATGACATGCGATGTACATGGTGAGCCCAAGAATGGCATGTAAGTGTGCACCTATGCCAATTATGAAGTAAAACACTTCATTTTTATTTCCATGCCTTTTATGTAATGATAACGCTTGGAATTGTTTATCTTATATACATACCGCTTTTCTGAATGTGTTGAGAGGCATGCGTACTCAACCTATGACAAGTTTATTAAGCTCCATGAAGGTAATAAAACGTTGATGGATTTGACATCTCTCCTGTCGTGCAAAATTTTATCATGACAACTAGACATCTCAAAATTTTTGTTGCTTTATCTAGGTTGGACAGACTTTGTAAACCAAAGTGGAAATGAGGGGACCGGGAAAACTAAGTATTTACTTTTTTTATAGGGATAAGTTTATGCCTACCTTTTGTCACAGATTGCCCTTGTGTGAATAATTTGATACATGCGCCAGTGAACTTATGTTATATCAGCTATTTACTTCAATTATTGGCAATCAGGATTCAGGCATGGTGTTTATTTTAGTTTTATAGGTATCGTGTGCATAAATTCAAAAACATGTATTATTCTTCCATTTTTGATTAAGATGTCGGCTCTGGTATCCTTTTATGATGTACTATATTTAGATTTTTTTTCCGTCCTACATAGTGGTTACTTGAATTGTGGGAGAGTTGAAACATACCTGAAAAAATTAGCAAAGCTAGATCCCCTAAGGTCTGAACACCAAACTGGTAGACTCTTTGCATTACTATCCATTCAGAAGTTGATGCATTGTACATTTTAAAGGGTGCATTTTAATAAACCAAAATGTTGAACACTGCAACCAATAACACCATGTCTACCCGACCTGTCCACCAACTAGAAATTTACAGGAACATCACACTCTGTCAATTATATTTACGTATTTCTTGGCAAAATAACATCCTGATCTGACCTTTGACTGCAGAAATGTAGCTGATGCCATGCCTGCATGCCACCCATGAGTGGCATACCTAATATCAATATCAAGGAATGACTTCCTGTAGTGCTCTTCTTCCTTGAGAGCACACGCAATAAGCTATCAAAGAGTATACAGCTTTTCCAAGAAAACGAAAGGGAACGACAGAGAATTGCCACTCTCTAACCCAAGAAATATCACAGTTGCAAGATCTTGGCAGCACACTTATTGAGTTGTGGAACCTAATGGACACACCAACTGCTGAACAGAAATGCTTTGACCATGTTACGTCTTTGATTTCAGTCTCACCAAATACAAAAATGCCCCAAGGATGCCTTGCACGTGAACTTATTGAGAAGTTTACAATTGATCGACCATTTTATGTTCTTTTGCTTTATTTGGATTGTCATTGAAGCTAACTTAATTTTTCTGTAAAATCCGGTTGAGGTTAAGAGGTTGAATTCTTCTGATCATTGTCAATACAACTATAGCGATTCATTGAGGGTAAGAGCTCACATAACTTTTATGTGCTTTACT
CDS Sequence
- >LOC_Os03g63010.1
ATGGTGGCGGTCGCCTCCGCCTCCCCGCTCACCGCCGCGGCGGCGCCCTCCATGTGCTGCTCGCCGCCCGCCTTCCTCCCTCTCCGTGCGCACCGCAGGAGGATTTTCCGCGCGGAGGCGATGAAGACGCAGCAGGAGAAGAAGCAGACCGAGGTGGCCGTCGAGGAGTCCTTCCCCTTCAGGGAGACGGCTCCTCCTGATGAGCCGCTGGTCACCGCCGAGGAGAGCTGGGTGGTTAAGCTCGAACAGTCTGTGAACATTTTCCTCACGGAGTCAGTCATCACGATACTTGATGGATTGTACCGTGACCGCAACTACGCTAGATTTTTCGTCTTGGAGACGATTGCTAGGGTGCCGTATTTTGGTGAGGATCTCGTCGTACATGCTCGCTATAGCCTGCAGCGTTTATCTCTATGCTTCACATGTATGAAACATTTGGCTGGTGGAGGAGAGCTGATTATATAA - >LOC_Os03g63010.2
ATGGTGGCGGTCGCCTCCGCCTCCCCGCTCACCGCCGCGGCGGCGCCCTCCATGTGCTGCTCGCCGCCCGCCTTCCTCCCTCTCCGTGCGCACCGCAGGAGGATTTTCCGCGCGGAGGCGATGAAGACGCAGCAGGAGAAGAAGCAGACCGAGGTGGCCGTCGAGGAGTCCTTCCCCTTCAGGGAGACGGCTCCTCCTGATGAGCCGCTGGTCACCGCCGAGGAGAGCTGGGTGGTTAAGCTCGAACAGTCTGTGAACATTTTCCTCACGGAGTCAGTCATCACGATACTTGATGGATTGTACCGTGACCGCAACTACGCTAGATTTTTCGTCTTGGAGACGATTGCTAGGGTGCCGTATTTTGGTGAGGATCTCGTCGTACATGCTCGCTATAGCCTGCAGCGTTTATCTCTATGCTTCACATGTATGAAACATTTGGCTGGTGGAGGAGAGCTGATTATATAA
Protein Sequence
- >LOC_Os03g63010.1
MVAVASASPLTAAAAPSMCCSPPAFLPLRAHRRRIFRAEAMKTQQEKKQTEVAVEESFPFRETAPPDEPLVTAEESWVVKLEQSVNIFLTESVITILDGLYRDRNYARFFVLETIARVPYFGEDLVVHARYSLQRLSLCFTCMKHLAGGGELII* - >LOC_Os03g63010.2
MVAVASASPLTAAAAPSMCCSPPAFLPLRAHRRRIFRAEAMKTQQEKKQTEVAVEESFPFRETAPPDEPLVTAEESWVVKLEQSVNIFLTESVITILDGLYRDRNYARFFVLETIARVPYFGEDLVVHARYSLQRLSLCFTCMKHLAGGGELII*