Gene Details:
- MSU gene ID: LOC_Os03g61750
- RAPdb gene ID: Os03g0833200
- Gene Symbol: OsTRM13
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- The 2’-O-methyladenosine nucleoside modification gene OsTRM13 positively regulates salt stress tolerance in rice.
- OsTRM13 transcript levels increased significantly upon salt stress and ABA treatment, and the OsTRM13 protein was found to be located primarily to the nucleus.
- More importantly, OsTRM13 overexpression plants displayed improved salt stress tolerance, and vice versa, OsTRM13 RNA interference (RNAi) plants showed reduced tolerance.
Function-related keywords:
- salt , tolerance , ABA , salt-stress , stress , nucleus , stress-tolerance
Literature:
- The 2’-O-methyladenosine nucleoside modification gene OsTRM13 positively regulates salt stress tolerance in rice . DOI: 10.1093/jxb/erx061 ; PMID: 28369540
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os03g61750.1
GACGTCACGCATTTCCCCTTCGGTTGTGTTCACACCGGGGGTCTGCACTTCTGCTCCCTCTCCGCCTCCGGCGTCTCCCGCTCGCCGCCGCCGCTGTCAGAGATGGGCCGTGCTCCGGCGAAACGGAAGCCCTCGTCGCCGCCGCCTCCTCCGCCTCCGGGCCGTTGCCACTTCTGGCTCCCTAACAAGCGCCGCCACTGCGCCAACACTCCGCTCCCAACCTCTCAGTACTGTGGGAACCACCTCCCGGATTCCGCCTCCGATGCCGGTGCGCCCTTCCGCCGCCTTGTCCCCTGCCCCGTCGACCCCTCGCACACCGTGCTCGAGGAGAACCTGGAGGCGCACGTCGGCAAGTGCCCCCTCAAGAAGCAGGCCGCGGCGCTCGCAGCGCAGCCGTTCTACTCCAAGGGCATCAACTCCGGTGGGGGAGAAGGCGGTGGGGGTGTCACCTCGGCCGCTAAGCGTGCATTGGTGCACAAGCTCACCAAGGATGAATTGCGCGCCTTGATTGAGAAGATCAAGTTGGCGCATGCGTCGGCGGCCATGGCAATGCGTGATTCATTTCTTGTTACAGATGCTTGCGACAATTGGATGAGGAACCAGGTTGATAGGAAGGTGCCATACCAGGAAAAGCATGTCACGCAGCAGGCATCCATCATTGGCAATATGGAGGCATTTGGTTTGCTGCAGAAGGGAGGTGAGGTGGCGGAGGAGAATGGTGTGAAAAATGCTCCGGCAGTGGTGGAATTCGGAGCAGGGAGAGGGTACTTGACTCAGATGCTGGCAGACTGCTACGGGATTAGGAATGTTTTCTTGGTTGAGAGAAGATCATACAAGCTCAAGTTGAAGATTTGAACCTTCAAGGAATAGAGGCATTGAGTGGACTTCATTATCTAGCAATTGGAAAGCATCTATGTGGACCTGCAACAGATATGACCATGATGTGCTGCCTTCATGAACGGTATAACCAGGCACATGAAAAAGAATATGGCAAAAGCAATCTATGTGGCCTTGCTTTGGCCACCTGCTGCCACCATCTGTGCCAATGGAATCACTATGCAAATAAGACATTCCTCTCAGGGTTAGGGATTACAGAGGAAGATTTCCATACCATGACTTGGTTTAGCAGCTGGGCTGTGGATGGTGATCACAGCTCCCCGGATTCCTCTTTAGAGGTTGAAGACTCATCTGTAGAAGACAGGTGCGGAAAAGCAGAGAAGTCTGATGTGGAGGTCAGCGGAATCGATAGACTCATCCGAAGTATACCAGCAGGGGAGAGAGCTGCCTTGGGGTTTATGTGTAAAGATATTATTGATACTGGTAGGCTATTATGGCTTAGAGAGAAGGGTTTAGATGCAGATCTTGTAAGCTACGTCCCATCAAATATTTCTCCAGAGAATCACTTACTCATTGCAAAATGTACGTCTTTATCAGGATGAAAAAGAAGCTTACATGTTCCATTTTGAACCTGATTAAGTTCGCAAATTTTGGTTGTATAATTTATGACATATGGTGCTCATCAGTTCAGTGAAAAATTAGGTGTGCAAGCCAAAAACATCCGGAGAGCATGCTATATCTCCATGTGAAATTTCAATATGAGAGCAGTCTCCATGTGAAATTCCAGTATTGAATCACATTTTGAATGATACATA
CDS Sequence
- >LOC_Os03g61750.1
ATGGGCCGTGCTCCGGCGAAACGGAAGCCCTCGTCGCCGCCGCCTCCTCCGCCTCCGGGCCGTTGCCACTTCTGGCTCCCTAACAAGCGCCGCCACTGCGCCAACACTCCGCTCCCAACCTCTCAGTACTGTGGGAACCACCTCCCGGATTCCGCCTCCGATGCCGGTGCGCCCTTCCGCCGCCTTGTCCCCTGCCCCGTCGACCCCTCGCACACCGTGCTCGAGGAGAACCTGGAGGCGCACGTCGGCAAGTGCCCCCTCAAGAAGCAGGCCGCGGCGCTCGCAGCGCAGCCGTTCTACTCCAAGGGCATCAACTCCGGTGGGGGAGAAGGCGGTGGGGGTGTCACCTCGGCCGCTAAGCGTGCATTGGTGCACAAGCTCACCAAGGATGAATTGCGCGCCTTGATTGAGAAGATCAAGTTGGCGCATGCGTCGGCGGCCATGGCAATGCGTGATTCATTTCTTGTTACAGATGCTTGCGACAATTGGATGAGGAACCAGGTTGATAGGAAGGTGCCATACCAGGAAAAGCATGTCACGCAGCAGGCATCCATCATTGGCAATATGGAGGCATTTGGTTTGCTGCAGAAGGGAGGTGAGGTGGCGGAGGAGAATGGTGTGAAAAATGCTCCGGCAGTGGTGGAATTCGGAGCAGGGAGAGGGTACTTGACTCAGATGCTGGCAGACTGCTACGGGATTAGGAATGTTTTCTTGGTTGAGAGAAGATCATACAAGCTCAAGTTGAAGATTTGA
Protein Sequence
- >LOC_Os03g61750.1
MGRAPAKRKPSSPPPPPPPGRCHFWLPNKRRHCANTPLPTSQYCGNHLPDSASDAGAPFRRLVPCPVDPSHTVLEENLEAHVGKCPLKKQAAALAAQPFYSKGINSGGGEGGGGVTSAAKRALVHKLTKDELRALIEKIKLAHASAAMAMRDSFLVTDACDNWMRNQVDRKVPYQEKHVTQQASIIGNMEAFGLLQKGGEVAEENGVKNAPAVVEFGAGRGYLTQMLADCYGIRNVFLVERRSYKLKLKI*