Gene Details:
- MSU gene ID: LOC_Os03g60910
- RAPdb gene ID: Os03g0824100
- Gene Symbol: OspTAC2
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- OspTAC2 encodes a pentatricopeptide repeat protein and regulates rice chloroplast development.
- Sequence and transcription analyses showed that OspTAC2 encodes a putative chloroplast protein consisting of 10 pentratricopeptide repeat (PPR) domains and a C-terminal small MutS-related (SMR) domain.
- Transmission electron microscopy revealed that the chloroplast of the OspTAC2 mutant lacks an organized thylakoid membrane.
- These results suggest that OspTAC2 plays a critical role in chloroplast development and indicate that the molecular function of the OspTAC2 gene is conserved in rice and Arabidopsis.
Function-related keywords:
Literature:
- OspTAC2 encodes a pentatricopeptide repeat protein and regulates rice chloroplast development . DOI: 10.1016/j.jgg.2016.09.002 ; PMID: 27760723
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os03g60910.1
CCCCAAAATCTACTACGCGAAGGGAGTGGAATCCTAAACCCCTCCTCTTCCTCCTCCTCGTCGTCGTCGGCGGCGGCGGATGGTGGATGCTCCCATGGCGCTCGTCTCCACCACCGCCACAGTCGCGTCGCCGTCCTACCACTACTGCGACCTGCTGTTCCCGCCCGCGAGGAGGTGGTGTTGCAGGGCGAGGAGACGCGGCGGGGGCGGGGGGCGGGTCGCGGTGGTGGCCGCGAGGGCGCCGAGGGAGGCGGCGGCGGCGGCGGTGGTGGTGGAGAATGGGGGGCACTCTTACGAGGTGGAGTCGCTGATCGACCGGCTGAGCAACCTGCCGCCGCGGGGGTCCATCGCGCGGTGCCTCGAGACGGCGCGCCACCGGCTCACGCTGCAGGACTTCGCCGCGGTGTACCGCGAGTTCTCCCGCCGCGGCGACTGGCAGCGGTCGCTCCGGCTGTTCAAGTACATGCAGCGCCAGTCGTGGTGCCGCCCCGACGAGCACATCCACGCCATCGTCATCGGCGTGCTCGGGCGCCAGGGCCCCGCCCTGCTCGACAAGTGCCTCGAGGTATTCCATGACCTCCCCTCCGAGTCGCGCACCGCGCTCTCCTACACCTCCCTCATCGCCGCCTACGCGCGCAACGCGCTGCACGAGGAGGCCCGCGAGCTGCTCGACCAGATGAAGGCCTCCGGCGTCGCGCCCACCGCCGCCACGTACAACACCGTGCTCGCCGCCTGCGCTCGCGCCACCGATCCGCCGGTCCCGTTCGACATGCTGCTCGGCCTCTTCGCTGAAATGCGCCATGACCCTTCCCCCTCCGTTCGTCCCGACCTCACCACCTACAACACCCTCCTCGCCGCTGCCGCTGTACGCGCTCTCTCCGACCAGTCCGAGATGCTGCTGCGCACCATGCTCGAGGCCGGTGTCTTGCCGGACACCGCATCTTACCGCCACATTGTTGATGCCTTCGCTGGTGCTGGTAACCTCTCCCGTGTGGCCGAGCTGTTTGCCGAGATGTCAGCAACGGGGCACACTCCAGACCCATCTGCGTATCTTGGGCTGATGGAAGCTCACACGCTGGTTGGTGCCACTGCTGAAGCGGTAGCTGTGCTGCGGCAGATGCAGGCTGATGGCTGTCCGCCGACAGCTGCGACATACCGTGTCTTGCTTGATCTGTATGGCAGACAGGGGAGGTTTGATGGCGTGCGCGAGCTCTTCCGCGAGATGAGAACAACTGTACCTCCAGACACAGCCACATACAATGTCCTGTTCCGCGTTTTTGGGGACGGTGGCTTCTTCAAGGAGGTGGTGGAGCTCTTCCAAGATATGCTTCACTCTGAAGTAGAGCCTGATATTGATACATGTGAAAACGTCATGGTTGCGTGTGGTCGTGGTGGACTCCATGAGGATGCAAGGGAAGTTCTTGACTATATCACAACAGAAGGAATGGTGCCTACTGCAAAGGCCTACACTGGCCTAGTTGAAGCGCTTGGCCATGCAGCTATGTATGAGGAGGCTTATGTTGCATTCAACATGATGACTGAAATTGGAAGCTTGCCAACTATAGAGACCTACAATGCTCTTGCAAATGCATTTGCAAAGGGTGGCCTTTTCCAGGAGGCTGAGGCCATCTTTTCTCGAATGACCAACAATGCTGCTATTCAGAAAGACAAGGATTCATTCGATGCTCTCATTGAAGCGTATTGCCAGGGTGCACAGTTAGATGATGCAGTTAAGGCATACATGGAGATGCGGAAGTCCAGGTTTAATCCAGATGAACGCTCCCTTGAGGGGGTACTCAATGCCTACTGCATAGCAGGTGTTATAGATGAGAGCAAAGAGCAGTTTGAAGAACTTCAGTCCATGGTGACTGTTCCTAGCATTATTGCTTATTGCATGATGTTGTCACTCTATGCCAGGAATGACAGGTGGACAGATGCTTATGATCTGTTGGAAGAAATGAAAACAAACCGTGCTAGTAGTACACATCAAGTGATTGCTTCCATGATCAAAGGGGAGTATGACGATGACTCCAATTGGCAAATGGTCGAATATGTTCTTGACAACAGTAACTTGGAAGGCTGTGACTACAGTTTACGATTCTTTAATGCACTCCTTGATGTCCTTTGGTGGTTTGGCCAGAAGGGTCGAGCTGCAAGGGTTTTGGATCAAGCATTAAAATATGGGCTCTTCCCTGAGTTATTTCGTGATACCAAGCTGGTCTGGTCTGCAGATGTGCATAGGATGTCAGTAGGTGGATCATTAGTGGCTGTGTCAGTGTGGCTCAATAAACTTTATGATAGACTAAAAGGCGATGAAGATCTTCCTCAGTTAGCCTCAGTTGTTGTATTGAGGGGACAAATGGAGAAAAGCACAGTTACAAGGGGATTGCCGATTGCAAAAGTTGTGTACTCTTTTCTGAATGATACACTATCATCATCCTTCCATTATCCAAAATGGAACAAGGGACGAATCATATGTTTGAAGTCCCAGTTGAAAAAGCTCCAGGCAGCCATAGATTCTTCCAATGGTGCTGCAATTTCTGGTTTTGTTCCCATGACAAACTCTCATTTGCCATCCCCTGGTTCCAAATTGTACACTAGGGAGTCCCAAGCTGATAATGGTTCTGCCCATTTGACTGATGAAACCTTGGTAGAAGAAAAGGAATCAGAACTCCTTGCACTGTGAGTTTTCAGGAGCTTGCTGCCTCCTTCCTTTTGCAGATGCGATGTTATCTGGCCGAACAAGGGAAGATAAGACACAGAATGTCTCACAATTTTGAAGTTTGGGCAATCAGATCGTCCTAATGTGCAATGAGATGGCCTTATGCCTTTGCAGTGCTCTCTTGCTTCACTATATGCAGTGGACGTGACTCCCAATATCCACAATCTTGCCTAGAACCCAGCACATAAGCATGAGTTCGTGATACTGGATTTGCGCTAACTTGATAGACAATGCTGGACTTCCAGTTGTGTTTCAGGATGTAGCACTTAGTAGGGAGAATCAGAGTATGCATGTTGTTGTTAGTTGCTCACTTGTTCTATATGACATTTCGTGCCTGCCCCATTCGGCAAGAACGAACCCTGTCTGGAATATATGGATTCACTCGATGCAAGTAAAACATGCTGATGAGTCAGTGGAACACATCAGTCATCGATACGTTTCTGATGGAAATAATATCGGGAGTTTGTATCACCGTATGGTTCCAGTTCCTACATGATGTATCAGTGTGCCCGATCTTTTTAATGCAAGCTGCCTTCTAAAAATATTCTTGTGTATGATGCTGCCATGCTGGTGTTTGTTTTTGAATTCGTGGTGTAAGATCTTGAAAGCTTATATAAGTAACAAATATGAAGGTTTAATTTGTGCAATGACATTAATAGACGTGTCAAGAAAATACTTTTATGTAGTTATATTTTATATAATTCGTATGAATATATGATCAGAGAAGAGTATGTAATCAA
CDS Sequence
- >LOC_Os03g60910.1
ATGGTGGATGCTCCCATGGCGCTCGTCTCCACCACCGCCACAGTCGCGTCGCCGTCCTACCACTACTGCGACCTGCTGTTCCCGCCCGCGAGGAGGTGGTGTTGCAGGGCGAGGAGACGCGGCGGGGGCGGGGGGCGGGTCGCGGTGGTGGCCGCGAGGGCGCCGAGGGAGGCGGCGGCGGCGGCGGTGGTGGTGGAGAATGGGGGGCACTCTTACGAGGTGGAGTCGCTGATCGACCGGCTGAGCAACCTGCCGCCGCGGGGGTCCATCGCGCGGTGCCTCGAGACGGCGCGCCACCGGCTCACGCTGCAGGACTTCGCCGCGGTGTACCGCGAGTTCTCCCGCCGCGGCGACTGGCAGCGGTCGCTCCGGCTGTTCAAGTACATGCAGCGCCAGTCGTGGTGCCGCCCCGACGAGCACATCCACGCCATCGTCATCGGCGTGCTCGGGCGCCAGGGCCCCGCCCTGCTCGACAAGTGCCTCGAGGTATTCCATGACCTCCCCTCCGAGTCGCGCACCGCGCTCTCCTACACCTCCCTCATCGCCGCCTACGCGCGCAACGCGCTGCACGAGGAGGCCCGCGAGCTGCTCGACCAGATGAAGGCCTCCGGCGTCGCGCCCACCGCCGCCACGTACAACACCGTGCTCGCCGCCTGCGCTCGCGCCACCGATCCGCCGGTCCCGTTCGACATGCTGCTCGGCCTCTTCGCTGAAATGCGCCATGACCCTTCCCCCTCCGTTCGTCCCGACCTCACCACCTACAACACCCTCCTCGCCGCTGCCGCTGTACGCGCTCTCTCCGACCAGTCCGAGATGCTGCTGCGCACCATGCTCGAGGCCGGTGTCTTGCCGGACACCGCATCTTACCGCCACATTGTTGATGCCTTCGCTGGTGCTGGTAACCTCTCCCGTGTGGCCGAGCTGTTTGCCGAGATGTCAGCAACGGGGCACACTCCAGACCCATCTGCGTATCTTGGGCTGATGGAAGCTCACACGCTGGTTGGTGCCACTGCTGAAGCGGTAGCTGTGCTGCGGCAGATGCAGGCTGATGGCTGTCCGCCGACAGCTGCGACATACCGTGTCTTGCTTGATCTGTATGGCAGACAGGGGAGGTTTGATGGCGTGCGCGAGCTCTTCCGCGAGATGAGAACAACTGTACCTCCAGACACAGCCACATACAATGTCCTGTTCCGCGTTTTTGGGGACGGTGGCTTCTTCAAGGAGGTGGTGGAGCTCTTCCAAGATATGCTTCACTCTGAAGTAGAGCCTGATATTGATACATGTGAAAACGTCATGGTTGCGTGTGGTCGTGGTGGACTCCATGAGGATGCAAGGGAAGTTCTTGACTATATCACAACAGAAGGAATGGTGCCTACTGCAAAGGCCTACACTGGCCTAGTTGAAGCGCTTGGCCATGCAGCTATGTATGAGGAGGCTTATGTTGCATTCAACATGATGACTGAAATTGGAAGCTTGCCAACTATAGAGACCTACAATGCTCTTGCAAATGCATTTGCAAAGGGTGGCCTTTTCCAGGAGGCTGAGGCCATCTTTTCTCGAATGACCAACAATGCTGCTATTCAGAAAGACAAGGATTCATTCGATGCTCTCATTGAAGCGTATTGCCAGGGTGCACAGTTAGATGATGCAGTTAAGGCATACATGGAGATGCGGAAGTCCAGGTTTAATCCAGATGAACGCTCCCTTGAGGGGGTACTCAATGCCTACTGCATAGCAGGTGTTATAGATGAGAGCAAAGAGCAGTTTGAAGAACTTCAGTCCATGGTGACTGTTCCTAGCATTATTGCTTATTGCATGATGTTGTCACTCTATGCCAGGAATGACAGGTGGACAGATGCTTATGATCTGTTGGAAGAAATGAAAACAAACCGTGCTAGTAGTACACATCAAGTGATTGCTTCCATGATCAAAGGGGAGTATGACGATGACTCCAATTGGCAAATGGTCGAATATGTTCTTGACAACAGTAACTTGGAAGGCTGTGACTACAGTTTACGATTCTTTAATGCACTCCTTGATGTCCTTTGGTGGTTTGGCCAGAAGGGTCGAGCTGCAAGGGTTTTGGATCAAGCATTAAAATATGGGCTCTTCCCTGAGTTATTTCGTGATACCAAGCTGGTCTGGTCTGCAGATGTGCATAGGATGTCAGTAGGTGGATCATTAGTGGCTGTGTCAGTGTGGCTCAATAAACTTTATGATAGACTAAAAGGCGATGAAGATCTTCCTCAGTTAGCCTCAGTTGTTGTATTGAGGGGACAAATGGAGAAAAGCACAGTTACAAGGGGATTGCCGATTGCAAAAGTTGTGTACTCTTTTCTGAATGATACACTATCATCATCCTTCCATTATCCAAAATGGAACAAGGGACGAATCATATGTTTGAAGTCCCAGTTGAAAAAGCTCCAGGCAGCCATAGATTCTTCCAATGGTGCTGCAATTTCTGGTTTTGTTCCCATGACAAACTCTCATTTGCCATCCCCTGGTTCCAAATTGTACACTAGGGAGTCCCAAGCTGATAATGGTTCTGCCCATTTGACTGATGAAACCTTGGTAGAAGAAAAGGAATCAGAACTCCTTGCACTGTGA
Protein Sequence
- >LOC_Os03g60910.1
MVDAPMALVSTTATVASPSYHYCDLLFPPARRWCCRARRRGGGGGRVAVVAARAPREAAAAAVVVENGGHSYEVESLIDRLSNLPPRGSIARCLETARHRLTLQDFAAVYREFSRRGDWQRSLRLFKYMQRQSWCRPDEHIHAIVIGVLGRQGPALLDKCLEVFHDLPSESRTALSYTSLIAAYARNALHEEARELLDQMKASGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDPSPSVRPDLTTYNTLLAAAAVRALSDQSEMLLRTMLEAGVLPDTASYRHIVDAFAGAGNLSRVAELFAEMSATGHTPDPSAYLGLMEAHTLVGATAEAVAVLRQMQADGCPPTAATYRVLLDLYGRQGRFDGVRELFREMRTTVPPDTATYNVLFRVFGDGGFFKEVVELFQDMLHSEVEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTAKAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNALANAFAKGGLFQEAEAIFSRMTNNAAIQKDKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSMVTVPSIIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASSTHQVIASMIKGEYDDDSNWQMVEYVLDNSNLEGCDYSLRFFNALLDVLWWFGQKGRAARVLDQALKYGLFPELFRDTKLVWSADVHRMSVGGSLVAVSVWLNKLYDRLKGDEDLPQLASVVVLRGQMEKSTVTRGLPIAKVVYSFLNDTLSSSFHYPKWNKGRIICLKSQLKKLQAAIDSSNGAAISGFVPMTNSHLPSPGSKLYTRESQADNGSAHLTDETLVEEKESELLAL*