Information report for OsIDS1
Gene Details
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Functional Descriptions
- Here we demonstrated that SNB and Oryza sativa INDETERMINATE SPIKELET 1 (OsIDS1) together play important roles in inflorescence architecture and the establishment of floral meristems.
- In snb OsIDS1 double mutants, the numbers of branches and spikelets within a panicle are significantly decreased, and the transition to a floral meristem is further delayed compared with the snb single mutant.
- Two AP2 family genes, supernumerary bract (SNB) and Osindeterminate spikelet 1 (OsIDS1), synergistically control inflorescence architecture and floral meristem establishment in rice.
- Expression analyses showed that SNB and OsIDS1 are required for spatio-temporal expression of B- and E-function floral organ identity genes in the lodicules.
Functional Keywords
Literature and News
- Two AP2 family genes, supernumerary bract (SNB) and Osindeterminate spikelet 1 (OsIDS1), synergistically control inflorescence architecture and floral meristem establishment in rice . DOI: 10.1111/j.1365-313X.2011.04804.x ; PMID: 22003982
- Histone Deacetylase 701 (HDT701) Induces Flowering in Rice by Modulating Expression of OsIDS1 . DOI: 10.14348/molcells.2018.0148 ; PMID: 29991671
- INDETERMINATE SPIKELET1 Recruits Histone Deacetylase and a Transcriptional Repression Complex to Regulate Rice Salt Tolerance . DOI: 10.1104/pp.18.00324 ; PMID: 30061119
Gene Resources
- UniProt: Q84TB5
- EMBL: AC104433, AP008209, AY685113
- AlphaFoldDB: Q84TB5
- EnsemblPlants: Os03t0818800-01
- Gramene: Os03t0818800-01
- KEGG: osa:4334582
- InterPro: IPR001471, IPR016177, IPR036955
- PANTHER: PTHR32467, PTHR32467:SF67
- SUPFAM: SSF54171
- PROSITE: PS51032
- Gene3D: 3.30.730.10
- OrthoDB: Q84TB5
- SWISS-MODEL: Q84TB5
- Conserved Domain Database: cd00018
Sequences
cDNA Sequence
- >LOC_Os03g60430.2
ATCGAGTATAAGCGCCTAGAAAAACCCACGCAAATGCAAACCCGCTCATCATCGTCTCTCTCCCAAAGGACCAGAGGTTGGGGACTTGGGAGTGGAGACCGGCCATCTCCGGCGAGCCGATCGCCGTGCGACACGTTAGCCACCGCCGCCGTCCCTACCACCGGAGGCGTCCGCTGCGCGTGTGGCCGTAGCGAAATTCTAATCCCCTGTGCGATAGTTTCTCATCTCCTCCCTGAGATACCCTCCTCCGCCACTTCGACGTCCCATCCATCTCTCTCTATTTCCTTTTCTCCCGCTGCTCCCCACCTCTCTCTCTCCTCCTCCTCTTCTTCTTCATCCAACCCCCCATGGCGACCACCACCTGGTGCTGTGGTTGCTGCTGCTCCTGCCTCGCCACCGCTCGAAGCCGGTGAGTGAGTCGTCGTCAGTCGAGGCGCCAACGATCGAGCTGAGCTATAGCCAGGGTGAAGCAGAAGGCGAGGAGAGTTGGTGGTGAGTTGAACTCGATCGAAGTCGGAAGAGCGAGAGAGGGTGGAAGTGTTTGGTTGGGTTGCCGGTGTGGTGAGGATTGGAGATGTTGTTGGATCTCAATGTGGAGTCGCCGGAACGGTCCGGCACGTCGAGCTCCTCGGTGCTAAACTCCGGGGACGCCGGAGGCGGCGGTGGCGGTGGCGGTGGCGGAGGATTATTCCGGTTCGACCTCCTCGCGAGCAGCCCCGACGACGACGAGTGCTCCGGGGAGCAGCATCAGTTGCCGGCCGCCTCGGGGATCGTGACGCGTCAGCTCCTCCCGCCTCCGCCTCCCGCGGCGCCGTCGCCGGCGCCGGCGTGGCAGCCGCCGCGCCGCGCGGCGGAGGATGCCGCCCTCGCGCAGCGGCCGGTGGTCGCGAAGAAGACGCGGCGCGGGCCGAGGTCGCGGAGCTCGCAGTACAGGGGCGTCACCTTCTACAGGAGGACCGGCCGCTGGGAGTCGCACATATGGGATTGCGGGAAGCAAGTCTACCTAGGTGGTTTCGACACGGCGCACGCGGCAGCAAGGGCTTACGATCGCGCTGCGATCAAGTTCCGGGGACTGGAGGCTGACATCAACTTCAACCTGAGCGACTACGAGGACGATCTGAAGCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCACATACTCCGGCGACAGAGCACGGGATTCGCGAGGGGGAGCTCCAAGTTCCGCGGCGTCACGCTGCACAAGTGCGGCCGCTGGGAGGCACGCATGGGCCAACTTCTTGGCAAGAAGTACATATACCTTGGGCTCTTTGACACCGAAGTTGAAGCTGCAAGAGCATATGACAGGGCAGCTATTCGCTTCAATGGGAGGGAAGCTGTTACCAACTTCGAGCCTGCATCCTACAATGTGGATGCTTTACCAGACGCCGGAAATGAGGCAATTGTTGATGGCGATCTTGATTTGGATTTGCGGATTTCGCAACCTAATGCGCGTGACTCCAAAAGCGATGTCGCCACAACTGGCCTCCAGTTAACTTGTGATTCCCCTGAATCTTCAAATATTACAGTCCACCAGCCAATGGGCTCGTCTCCCCAATGGACTGTGCATCACCAAAGCACACCACTGCCCCCTCAGCATCAACGTTTGTACCCATCTCATTGTCTTGGCTTCCTCCCGAACCTACAGGAGAGGCCAATGGACAGAAGGCCTGAGCTGGGTCCCATGCCGTTCCCAACACAGGCTTGGCAAATGCAGGCCCCTTCTCACTTGCCATTGCTCCACGCTGCAGCATCATCAGGATTCTCTGCCGGCGCCGGCGCCGGCGTCGCCGCCGCCACCCGCCGGCAGCCGCCGTTCCCGGCGGATCACCCCTTCTACTTCCCGCCAACCGCCTGACAGACCATCGCGGTTCACGTGTTTGCACGGCGTTCGACTTCGGATCGATCGCCTTGCCGGTGAAACACCATTAACTGTTCTTGCAAATTTATATACAGTATTAAGGCAGTGAGGTAGTACTAGCCAGGTGCATTGACACCCACAGCTCATTGATCTCTCTGTCTTCTCCGTGTTAATACTGCTGCTACTGTACGTATCGTGCCATGAATATAATTAATGAATTCATCATGGGCATGGAGCTTGACAAGTTGTGCTC - >LOC_Os03g60430.1
ATCGAGTATAAGCGCCTAGAAAAACCCACGCAAATGCAAACCCGCTCATCATCGTCTCTCTCCCAAAGGACCAGAGGTTGGGGACTTGGGAGTGGAGACCGGCCATCTCCGGCGAGCCGATCGCCGTGCGACACGTTAGCCACCGCCGCCGTCCCTACCACCGGAGGCGTCCGCTGCGCGTGTGGCCGTAGCGAAATTCTAATCCCCTGTGCGATAGTTTCTCATCTCCTCCCTGAGATACCCTCCTCCGCCACTTCGACGTCCCATCCATCTCTCTCTATTTCCTTTTCTCCCGCTGCTCCCCACCTCTCTCTCTCCTCCTCCTCTTCTTCTTCATCCAACCCCCCATGGCGACCACCACCTGGTGCTGTGGTTGCTGCTGCTCCTGCCTCGCCACCGCTCGAAGCCGGTGAGTGAGTCGTCGTCAGTCGAGGCGCCAACGATCGAGCTGAGCTATAGCCAGGGTGAAGCAGAAGGCGAGGAGAGTTGGTGGTGAGTTGAACTCGATCGAAGTCGGAAGAGCGAGAGAGGGTGGAAGTGTTTGGTTGGGTTGCCGGTGTGGTGAGGATTGGAGATGTTGTTGGATCTCAATGTGGAGTCGCCGGAACGGTCCGGCACGTCGAGCTCCTCGGTGCTAAACTCCGGGGACGCCGGAGGCGGCGGTGGCGGTGGCGGTGGCGGAGGATTATTCCGGTTCGACCTCCTCGCGAGCAGCCCCGACGACGACGAGTGCTCCGGGGAGCAGCATCAGTTGCCGGCCGCCTCGGGGATCGTGACGCGTCAGCTCCTCCCGCCTCCGCCTCCCGCGGCGCCGTCGCCGGCGCCGGCGTGGCAGCCGCCGCGCCGCGCGGCGGAGGATGCCGCCCTCGCGCAGCGGCCGGTGGTCGCGAAGAAGACGCGGCGCGGGCCGAGGTCGCGGAGCTCGCAGTACAGGGGCGTCACCTTCTACAGGAGGACCGGCCGCTGGGAGTCGCACATATGGGATTGCGGGAAGCAAGTCTACCTAGGTGGTTTCGACACGGCGCACGCGGCAGCAAGGGCTTACGATCGCGCTGCGATCAAGTTCCGGGGACTGGAGGCTGACATCAACTTCAACCTGAGCGACTACGAGGACGATCTGAAGCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCACATACTCCGGCGACAGAGCACGGGATTCGCGAGGGGGAGCTCCAAGTTCCGCGGCGTCACGCTGCACAAGTGCGGCCGCTGGGAGGCACGCATGGGCCAACTTCTTGGCAAGAAGTACATATACCTTGGGCTCTTTGACACCGAAGTTGAAGCTGCAAGAGCATATGACAGGGCAGCTATTCGCTTCAATGGGAGGGAAGCTGTTACCAACTTCGAGCCTGCATCCTACAATGTGGATGCTTTACCAGACGCCGGAAATGAGGCAATTGTTGATGGCGATCTTGATTTGGATTTGCGGATTTCGCAACCTAATGCGCGTGACTCCAAAAGCGATGTCGCCACAACTGGCCTCCAGTTAACTTGTGATTCCCCTGAATCTTCAAATATTACAGTCCACCAGCCAATGGGCTCGTCTCCCCAATGGACTGTGCATCACCAAAGCACACCACTGCCCCCTCAGCATCAACGTTTGTACCCATCTCATTGTCTTGGCTTCCTCCCGAACCTACAGGAGAGGCCAATGGACAGAAGGCCTGAGCTGGGTCCCATGCCGTTCCCAACACAGGCTTGGCAAATGCAGGCCCCTTCTCACTTGCCATTGCTCCACGCTGCAGCATCATCAGGATTCTCTGCCGGCGCCGGCGCCGGCGTCGCCGCCGCCACCCGCCGGCAGCCGCCGTTCCCGGCGGATCACCCCTTCTACTTCCCGCCAACCGCCTGACAGACCATCGCGGTTCACGTGTTTGCACGGCGTTCGACTTCGGATCGATCGCCTTGCCGGTGAAACACCATTAACTGTTCTTGCAAATTTATATACAGTATTAAGGCAGTGAGGTAGTACTAGCCAGGTGCATTGACACCCACAGCTCATTGATCTCTCTGTCTTCTCCGTGTTAATACTGCTGCTACTGTACGTATCGTGCCATGAATATAATTAATGAATTCATCATGGGCATGGAGCTTGACAAGTTGTGCTC
CDS Sequence
- >LOC_Os03g60430.2
ATGTTGTTGGATCTCAATGTGGAGTCGCCGGAACGGTCCGGCACGTCGAGCTCCTCGGTGCTAAACTCCGGGGACGCCGGAGGCGGCGGTGGCGGTGGCGGTGGCGGAGGATTATTCCGGTTCGACCTCCTCGCGAGCAGCCCCGACGACGACGAGTGCTCCGGGGAGCAGCATCAGTTGCCGGCCGCCTCGGGGATCGTGACGCGTCAGCTCCTCCCGCCTCCGCCTCCCGCGGCGCCGTCGCCGGCGCCGGCGTGGCAGCCGCCGCGCCGCGCGGCGGAGGATGCCGCCCTCGCGCAGCGGCCGGTGGTCGCGAAGAAGACGCGGCGCGGGCCGAGGTCGCGGAGCTCGCAGTACAGGGGCGTCACCTTCTACAGGAGGACCGGCCGCTGGGAGTCGCACATATGGGATTGCGGGAAGCAAGTCTACCTAGGTGGTTTCGACACGGCGCACGCGGCAGCAAGGGCTTACGATCGCGCTGCGATCAAGTTCCGGGGACTGGAGGCTGACATCAACTTCAACCTGAGCGACTACGAGGACGATCTGAAGCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCACATACTCCGGCGACAGAGCACGGGATTCGCGAGGGGGAGCTCCAAGTTCCGCGGCGTCACGCTGCACAAGTGCGGCCGCTGGGAGGCACGCATGGGCCAACTTCTTGGCAAGAAGTACATATACCTTGGGCTCTTTGACACCGAAGTTGAAGCTGCAAGAGCATATGACAGGGCAGCTATTCGCTTCAATGGGAGGGAAGCTGTTACCAACTTCGAGCCTGCATCCTACAATGTGGATGCTTTACCAGACGCCGGAAATGAGGCAATTGTTGATGGCGATCTTGATTTGGATTTGCGGATTTCGCAACCTAATGCGCGTGACTCCAAAAGCGATGTCGCCACAACTGGCCTCCAGTTAACTTGTGATTCCCCTGAATCTTCAAATATTACAGTCCACCAGCCAATGGGCTCGTCTCCCCAATGGACTGTGCATCACCAAAGCACACCACTGCCCCCTCAGCATCAACGTTTGTACCCATCTCATTGTCTTGGCTTCCTCCCGAACCTACAGGAGAGGCCAATGGACAGAAGGCCTGAGCTGGGTCCCATGCCGTTCCCAACACAGGCTTGGCAAATGCAGGCCCCTTCTCACTTGCCATTGCTCCACGCTGCAGCATCATCAGGATTCTCTGCCGGCGCCGGCGCCGGCGTCGCCGCCGCCACCCGCCGGCAGCCGCCGTTCCCGGCGGATCACCCCTTCTACTTCCCGCCAACCGCCTGA - >LOC_Os03g60430.1
ATGTTGTTGGATCTCAATGTGGAGTCGCCGGAACGGTCCGGCACGTCGAGCTCCTCGGTGCTAAACTCCGGGGACGCCGGAGGCGGCGGTGGCGGTGGCGGTGGCGGAGGATTATTCCGGTTCGACCTCCTCGCGAGCAGCCCCGACGACGACGAGTGCTCCGGGGAGCAGCATCAGTTGCCGGCCGCCTCGGGGATCGTGACGCGTCAGCTCCTCCCGCCTCCGCCTCCCGCGGCGCCGTCGCCGGCGCCGGCGTGGCAGCCGCCGCGCCGCGCGGCGGAGGATGCCGCCCTCGCGCAGCGGCCGGTGGTCGCGAAGAAGACGCGGCGCGGGCCGAGGTCGCGGAGCTCGCAGTACAGGGGCGTCACCTTCTACAGGAGGACCGGCCGCTGGGAGTCGCACATATGGGATTGCGGGAAGCAAGTCTACCTAGGTGGTTTCGACACGGCGCACGCGGCAGCAAGGGCTTACGATCGCGCTGCGATCAAGTTCCGGGGACTGGAGGCTGACATCAACTTCAACCTGAGCGACTACGAGGACGATCTGAAGCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCACATACTCCGGCGACAGAGCACGGGATTCGCGAGGGGGAGCTCCAAGTTCCGCGGCGTCACGCTGCACAAGTGCGGCCGCTGGGAGGCACGCATGGGCCAACTTCTTGGCAAGAAGTACATATACCTTGGGCTCTTTGACACCGAAGTTGAAGCTGCAAGAGCATATGACAGGGCAGCTATTCGCTTCAATGGGAGGGAAGCTGTTACCAACTTCGAGCCTGCATCCTACAATGTGGATGCTTTACCAGACGCCGGAAATGAGGCAATTGTTGATGGCGATCTTGATTTGGATTTGCGGATTTCGCAACCTAATGCGCGTGACTCCAAAAGCGATGTCGCCACAACTGGCCTCCAGTTAACTTGTGATTCCCCTGAATCTTCAAATATTACAGTCCACCAGCCAATGGGCTCGTCTCCCCAATGGACTGTGCATCACCAAAGCACACCACTGCCCCCTCAGCATCAACGTTTGTACCCATCTCATTGTCTTGGCTTCCTCCCGAACCTACAGGAGAGGCCAATGGACAGAAGGCCTGAGCTGGGTCCCATGCCGTTCCCAACACAGGCTTGGCAAATGCAGGCCCCTTCTCACTTGCCATTGCTCCACGCTGCAGCATCATCAGGATTCTCTGCCGGCGCCGGCGCCGGCGTCGCCGCCGCCACCCGCCGGCAGCCGCCGTTCCCGGCGGATCACCCCTTCTACTTCCCGCCAACCGCCTGA
Protein Sequence
- >LOC_Os03g60430.2
MLLDLNVESPERSGTSSSSVLNSGDAGGGGGGGGGGGLFRFDLLASSPDDDECSGEQHQLPAASGIVTRQLLPPPPPAAPSPAPAWQPPRRAAEDAALAQRPVVAKKTRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLEADINFNLSDYEDDLKQMRNWTKEEFVHILRRQSTGFARGSSKFRGVTLHKCGRWEARMGQLLGKKYIYLGLFDTEVEAARAYDRAAIRFNGREAVTNFEPASYNVDALPDAGNEAIVDGDLDLDLRISQPNARDSKSDVATTGLQLTCDSPESSNITVHQPMGSSPQWTVHHQSTPLPPQHQRLYPSHCLGFLPNLQERPMDRRPELGPMPFPTQAWQMQAPSHLPLLHAAASSGFSAGAGAGVAAATRRQPPFPADHPFYFPPTA* - >LOC_Os03g60430.1
MLLDLNVESPERSGTSSSSVLNSGDAGGGGGGGGGGGLFRFDLLASSPDDDECSGEQHQLPAASGIVTRQLLPPPPPAAPSPAPAWQPPRRAAEDAALAQRPVVAKKTRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLEADINFNLSDYEDDLKQMRNWTKEEFVHILRRQSTGFARGSSKFRGVTLHKCGRWEARMGQLLGKKYIYLGLFDTEVEAARAYDRAAIRFNGREAVTNFEPASYNVDALPDAGNEAIVDGDLDLDLRISQPNARDSKSDVATTGLQLTCDSPESSNITVHQPMGSSPQWTVHHQSTPLPPQHQRLYPSHCLGFLPNLQERPMDRRPELGPMPFPTQAWQMQAPSHLPLLHAAASSGFSAGAGAGVAAATRRQPPFPADHPFYFPPTA*