Information report for OsMet1-1;OsMET1a
Gene Details
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Functional Descriptions
- The transcripts of OsMET1b accumulate more abundantly than those of OsMET1a in all of the tissues examined, and both genes actively transcribed at the callus, imbibed embryo, root, meristem, young panicle, anther, pistil, and endosperm, all of which contain actively dividing cells.
- Key genes associated with maintaining DNA methylation in rice were analyzed by RT-qPCR and indicated that OsDMT702 might be responsible for the global increase of DNA methylation level in rice under RBSDV stress.
Literature and News
- Alternative splicing of the rice OsMET1 genes encoding maintenance DNA methyltransferase . DOI: 10.1016/j.jplph.2007.12.003 ; PMID: 18281124
- Purification and characterization of rice DNA methyltransferase . DOI: 10.1016/j.plaphy.2009.03.014 ; PMID: 19401269
- De novo DNA methylation induced by siRNA targeted to endogenous transcribed sequences is gene-specific and OsMet1-independent in rice . DOI: 10.1111/j.1365-313X.2008.03624.x ; PMID: 18643988
- Homologous recombination-mediated knock-in targeting of the MET1a gene for a maintenance DNA methyltransferase reproducibly reveals dosage-dependent spatiotemporal gene expression in rice . DOI: 10.1111/j.1365-313X.2009.03947.x ; PMID: 19519802
- Alterations of Rice (Oryza sativa L.) DNA Methylation Patterns Associated with Gene Expression in Response to Rice Black Streaked Dwarf Virus . DOI: 10.3390/ijms21165753 ; PMID: 32796598
Gene Resources
- NCBI ID: AF462029
Sequences
cDNA Sequence
- >LOC_Os03g58400.1
CACTTACTAAATGGGCTATTGAATATGAAGAACCTGCTGGGGATGCATTTGGTGAAAACCATCCAGAAGCTGCAGTATTTGTCGAAAACTGCAATGTGATTCTGAAGGCAATTATGGACAAGTGTGGTGATTCTGATGATTGCATCTCCACTTCTGAGGCTGCTGAACGAGCAGCTAAACTTTCTGAGGACAAGATTAAGAATCTGCCCGTGCCTGGCGAAGTAGAATTCATAAATGGTGGCCCTCCGTGTCAGGGTTTTTCTGGGATGAACAGATTCAATCAAAGTCCCTGGAGCAAAGTCCAGTGCGAGATGATCTTAGCATTCCTGTCATTTGCGGAGTATTTCCGTCCTAGATTCTTTCTCTTAGAAAATGTTAGGAACTTTGTCTCGTTCAACAAAGGACAGACCTTCAGATTGACACTGGCATCACTCCTGGAGATGGGATACCAGGTCCGATTTGGAATTTTAGAGGCAGGGGCTTATGGTGTTGCGCAGTCCAGGAAAAGGGCATTCATTTGGGCCGCTGCACCTGGAGAGACTCTTCCAGAGTGGCCTGAACCAATGCACGTCTTTGCTAGCCCTGAGCTGAAAATAACTCTACCTGATGGCAAGTTCTACGCCGCTGTCAAGAGCACCGCTGCAGGAGCCCCTTTCCGCTCAATTACAGTTCGAGATACAATTGGGGATCTACCAGCTGTGGAAAATGGCGCCGGCAAACCAACAATTCAGTACGGAAGCGGTCCTGTGTCTTGGTTCCAGAAGAAGATTAGAAGCGACATGGCTTCACTGAATGACCACATATCTAAAGAGATGAATGAGCTGAACCTCATAAGATGCAAGCACATTCCAAAGCGCCCAGGTTGCGACTGGCATGACCTGCCAGATGAAAAGGTGAAGCTGTCCACAGGGCAGATGGTGGACTTGATCCCTTGGTGCTTGCCCAACACAGCCAAAAGGCACAATCAGTGGAAAGGACTGTACGGTAGGTTGGACTGGGAGGGCAATTTCCCCACTTCTGTAACGGATCCTCAGCCAATGGGGAAGGTCGGCATGTGCTTCCATCCTGAGCAGGACAGGATCATTACTGTCCGTGAATGTGCTCGATCCCAGGGCTTCCCCGATAGCTACCGTTTCGCTGGCAACATCCAGAACAAGCACAGGCAGATCGGGAATGCCGTGCCACCGCCCCTTGCCTATGCCCTCGGGAGGAAGCTCAAGCAAGCCATCGACGCCAAGCGTTGAGTGGCTTTTAACTTCACTGCATCGCCCTCATTTTTTGGTCGGTCCAAATAGGTTTAACTAAGCATTACAGTTTTCTATATTTTGTGAGCAATTGGACTCCTAAAATTAATTCTGGGATGGTTACATGGATTACCTTTTGT
CDS Sequence
- >LOC_Os03g58400.1
ATGGACAAGTGTGGTGATTCTGATGATTGCATCTCCACTTCTGAGGCTGCTGAACGAGCAGCTAAACTTTCTGAGGACAAGATTAAGAATCTGCCCGTGCCTGGCGAAGTAGAATTCATAAATGGTGGCCCTCCGTGTCAGGGTTTTTCTGGGATGAACAGATTCAATCAAAGTCCCTGGAGCAAAGTCCAGTGCGAGATGATCTTAGCATTCCTGTCATTTGCGGAGTATTTCCGTCCTAGATTCTTTCTCTTAGAAAATGTTAGGAACTTTGTCTCGTTCAACAAAGGACAGACCTTCAGATTGACACTGGCATCACTCCTGGAGATGGGATACCAGGTCCGATTTGGAATTTTAGAGGCAGGGGCTTATGGTGTTGCGCAGTCCAGGAAAAGGGCATTCATTTGGGCCGCTGCACCTGGAGAGACTCTTCCAGAGTGGCCTGAACCAATGCACGTCTTTGCTAGCCCTGAGCTGAAAATAACTCTACCTGATGGCAAGTTCTACGCCGCTGTCAAGAGCACCGCTGCAGGAGCCCCTTTCCGCTCAATTACAGTTCGAGATACAATTGGGGATCTACCAGCTGTGGAAAATGGCGCCGGCAAACCAACAATTCAGTACGGAAGCGGTCCTGTGTCTTGGTTCCAGAAGAAGATTAGAAGCGACATGGCTTCACTGAATGACCACATATCTAAAGAGATGAATGAGCTGAACCTCATAAGATGCAAGCACATTCCAAAGCGCCCAGGTTGCGACTGGCATGACCTGCCAGATGAAAAGGTGAAGCTGTCCACAGGGCAGATGGTGGACTTGATCCCTTGGTGCTTGCCCAACACAGCCAAAAGGCACAATCAGTGGAAAGGACTGTACGGTAGGTTGGACTGGGAGGGCAATTTCCCCACTTCTGTAACGGATCCTCAGCCAATGGGGAAGGTCGGCATGTGCTTCCATCCTGAGCAGGACAGGATCATTACTGTCCGTGAATGTGCTCGATCCCAGGGCTTCCCCGATAGCTACCGTTTCGCTGGCAACATCCAGAACAAGCACAGGCAGATCGGGAATGCCGTGCCACCGCCCCTTGCCTATGCCCTCGGGAGGAAGCTCAAGCAAGCCATCGACGCCAAGCGTTGA
Protein Sequence
- >LOC_Os03g58400.1
MDKCGDSDDCISTSEAAERAAKLSEDKIKNLPVPGEVEFINGGPPCQGFSGMNRFNQSPWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVAQSRKRAFIWAAAPGETLPEWPEPMHVFASPELKITLPDGKFYAAVKSTAAGAPFRSITVRDTIGDLPAVENGAGKPTIQYGSGPVSWFQKKIRSDMASLNDHISKEMNELNLIRCKHIPKRPGCDWHDLPDEKVKLSTGQMVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDSYRFAGNIQNKHRQIGNAVPPPLAYALGRKLKQAIDAKR*