Information report for REB
Gene Details
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Functional Descriptions
- The gene encoding the rice transcription factor, REB (rice endosperm bZIP) was cloned from a bacterial artificial chromosome library of rice.
- The function of the REB gene was explored by a transient assay by using a rice immature endosperm system.
- We isolated a novel bZIP protein (REB) gene encoding 425 amino acid residues from rice endosperm, which is similar to Opaque-2 heterodimerizing protein (OHP) of maize.
- A Super-shift assay using anti-REB antibody suggested that REB is a major DNA-binding protein for the alpha-globulin gene promoter in rice endosperm.
Functional Keywords
Literature and News
- A rice functional transcriptional activator, RISBZ1, responsible for endosperm-specific expression of storage protein genes through GCN4 motif . DOI: 10.1074/jbc.M007405200 ; PMID: 11133985
- Characterization of a novel rice bZIP protein which binds to the alpha-globulin promoter . DOI: 10.1023/a:1005784717782 ; PMID: 9049271
- Genomic survey and gene expression analysis of the basic leucine zipper transcription factor family in rice . DOI: 10.1104/pp.107.112821 ; PMID: 18065552
- Expression of the REB transcriptional activator in rice grains improves the yield of recombinant proteins whose genes are controlled by a Reb-responsive promoter . DOI: 10.1073/pnas.201411298 ; PMID: 11572990
Gene Resources
- UniProt: Q7X9A8
- EMBL: AC093713, AF395819, AP008209
- AlphaFoldDB: Q7X9A8
- EnsemblPlants: Os03t0796900-01
- Gramene: Os03t0796900-01
- KEGG: dosa:Os03g0796900, osa:4334424
- Orthologous matrix: GNAMNRC
- InterPro: IPR004827, IPR020983, IPR045314
- PANTHER: PTHR46408, PTHR46408:SF10
- SUPFAM: SSF57959
- PROSITE: PS50217
- Gene3D: 1.20.5.170
- OrthoDB: Q7X9A8
- SWISS-MODEL: Q7X9A8
- Conserved Domain Database: cd14702
- eggNOG: ENOG502QS0A
Sequences
cDNA Sequence
- >LOC_Os03g58250.1
GGAGCATCCGAGTCATTAATTTACACCCAAACACAAAAAATTAGCAGCACGCAGCCGCCTTCCCAATCCTCTCCTCTTCTCCAAGCGGCAATTCGCGCGAGGTTTTCTCCGATCAAACCCTCGAATCCCCCCCTCGCGAATCCATCGGAGGGTAGCCCCGCGATCCGCGTCGGCGAGAGCGGATTCCGATTCCGCGATGGAGCGGGTGTTCTCCGTGGAGGAGATCTCCGACCCATTCTGGGTCCCGCCTCCGCCGCCGCAGTCGGCGGCGGCGGCCCAGCAGCAGGGCGGCGGCGGCGTGGCTTCGGGAGGTGGTGGTGGTGTAGCGGGGGGCGGCGGCGGCGGGAACGCGATGAACCGGTGCCCGTCGGAGTGGTACTTCCAGAAGTTTCTGGAGGAGGCGGTGCTCGATAGCCCCGTCCCGAACCCTAGCCCGAGGGCCGAAGCGGGAGGGATCAGGGGCGCAGGAGGGGTGGTGCCGGTCGATGTTAAGCAGCCGCAGCTCTCGGCGGCGGCGGCGGCGGCGGCGACGACGAGCGCGGTGGTGGACCCCGTGGAGTACAACGCGATGCTGAAGCAGAAGCTGGAGAAGGACCTCGCCGCGGTCGCCATGTGGAGGGCCTCTGGCACAGTTCCACCTGAGCGTCCTGGAGCTGGTTCATCCTTGCTGAATGCAGATGTTTCACACATAGGCGCTCCTAATTCCATCGGAGGCAATGCTACTCCAGTTCAAAACATGCTAAGTGGCCCAAGTGGGGGATCGGGCTCACAGTTGGTACAGAATGTTGATGTCCTTGTAAAGCAGCCCACCAGCTCTTCATCAAGGGAGCAGTCAGATGATGATGACATGGAGGGAGAAGCTGAGACCACTGGAACTGCAAGACCTGCTGATCAAAGATTACAACGAAGGAAGCAATCCAATCGGGAGTCAGCCAGGCGCTCAAGAAGCAGAAAGGCAGCTCACTTGAATGAGCTGGAGGCACAGGTATCGCAATTAAGAGTCGAGAACTCCTCGCTGTTAAGGCGTCTTGCTGATGTTAACCAGAAGTACAATGATGCTGCTGTTGACAATAGAGTGCTAAAAGCAGATGTTGAGACCTTGAGAGCAAAGGTGAAGATGGCAGAGGACTCGGTGAAGCGGGTGACAGGCATGAACGCGTTGTTTCCCGCCGCTTCTGATATGTCATCCCTCAGCATGCCATTCAACAGCTCCCCATCTGAAGCAACGTCAGACGCTGCTGTTCCCATCCAAGATGACCCGAACAATTACTTCGCTACTAACAACGACATCGGAGGTAACAACAACTACATGCCCGACATACCTTCTTCGGCTCAGGAGGACGAGGACTTCGTCAATGGCGCTCTGGCTGCCGGCAAGATTGGCCGGACAGCCTCGCTGCAGCGGGTGGCGAGCCTGGAGCATCTCCAGAAGAGGATGTGCGGTGGGCCGGCTTCGTCTGGGTCGACGTCCTGAGACCGAAACCCAGAGCTGCTTCGGTTCTGAAAGACACTGCGAGCAGGAAATGATGATTGGACAGGCGTAGACATTGCTAATGCTGTGAGGTTGATGATTGTTGGTCGTCGTCGTCGTCATTGTGCATTCTTTGTAAGGGACACCTCTTAGTACCCTCTTCTTCTAAGGGACTTAGTACCCCTTGTGGATCTCATCGTCCTAAATACTATACACATTAGCCAAATGTTCATTGGTGTGATGGCGTCGTCCCTAATTTGAACGACTGATTTCAGGCAGCTGCTATGCTATCATTCAATAATACTTTGATCGATGCTTCCTTTTGTCTTTTGCTCTTAAGCAACCAAGCATAAAGATATCACTACCTTTTGAGCTGTTCA
CDS Sequence
- >LOC_Os03g58250.1
ATGGAGCGGGTGTTCTCCGTGGAGGAGATCTCCGACCCATTCTGGGTCCCGCCTCCGCCGCCGCAGTCGGCGGCGGCGGCCCAGCAGCAGGGCGGCGGCGGCGTGGCTTCGGGAGGTGGTGGTGGTGTAGCGGGGGGCGGCGGCGGCGGGAACGCGATGAACCGGTGCCCGTCGGAGTGGTACTTCCAGAAGTTTCTGGAGGAGGCGGTGCTCGATAGCCCCGTCCCGAACCCTAGCCCGAGGGCCGAAGCGGGAGGGATCAGGGGCGCAGGAGGGGTGGTGCCGGTCGATGTTAAGCAGCCGCAGCTCTCGGCGGCGGCGGCGGCGGCGGCGACGACGAGCGCGGTGGTGGACCCCGTGGAGTACAACGCGATGCTGAAGCAGAAGCTGGAGAAGGACCTCGCCGCGGTCGCCATGTGGAGGGCCTCTGGCACAGTTCCACCTGAGCGTCCTGGAGCTGGTTCATCCTTGCTGAATGCAGATGTTTCACACATAGGCGCTCCTAATTCCATCGGAGGCAATGCTACTCCAGTTCAAAACATGCTAAGTGGCCCAAGTGGGGGATCGGGCTCACAGTTGGTACAGAATGTTGATGTCCTTGTAAAGCAGCCCACCAGCTCTTCATCAAGGGAGCAGTCAGATGATGATGACATGGAGGGAGAAGCTGAGACCACTGGAACTGCAAGACCTGCTGATCAAAGATTACAACGAAGGAAGCAATCCAATCGGGAGTCAGCCAGGCGCTCAAGAAGCAGAAAGGCAGCTCACTTGAATGAGCTGGAGGCACAGGTATCGCAATTAAGAGTCGAGAACTCCTCGCTGTTAAGGCGTCTTGCTGATGTTAACCAGAAGTACAATGATGCTGCTGTTGACAATAGAGTGCTAAAAGCAGATGTTGAGACCTTGAGAGCAAAGGTGAAGATGGCAGAGGACTCGGTGAAGCGGGTGACAGGCATGAACGCGTTGTTTCCCGCCGCTTCTGATATGTCATCCCTCAGCATGCCATTCAACAGCTCCCCATCTGAAGCAACGTCAGACGCTGCTGTTCCCATCCAAGATGACCCGAACAATTACTTCGCTACTAACAACGACATCGGAGGTAACAACAACTACATGCCCGACATACCTTCTTCGGCTCAGGAGGACGAGGACTTCGTCAATGGCGCTCTGGCTGCCGGCAAGATTGGCCGGACAGCCTCGCTGCAGCGGGTGGCGAGCCTGGAGCATCTCCAGAAGAGGATGTGCGGTGGGCCGGCTTCGTCTGGGTCGACGTCCTGA
Protein Sequence
- >LOC_Os03g58250.1
MERVFSVEEISDPFWVPPPPPQSAAAAQQQGGGGVASGGGGGVAGGGGGGNAMNRCPSEWYFQKFLEEAVLDSPVPNPSPRAEAGGIRGAGGVVPVDVKQPQLSAAAAAAATTSAVVDPVEYNAMLKQKLEKDLAAVAMWRASGTVPPERPGAGSSLLNADVSHIGAPNSIGGNATPVQNMLSGPSGGSGSQLVQNVDVLVKQPTSSSSREQSDDDDMEGEAETTGTARPADQRLQRRKQSNRESARRSRSRKAAHLNELEAQVSQLRVENSSLLRRLADVNQKYNDAAVDNRVLKADVETLRAKVKMAEDSVKRVTGMNALFPAASDMSSLSMPFNSSPSEATSDAAVPIQDDPNNYFATNNDIGGNNNYMPDIPSSAQEDEDFVNGALAAGKIGRTASLQRVASLEHLQKRMCGGPASSGSTS*