Gene Details:
- MSU gene ID: LOC_Os03g52630
- RAPdb gene ID: Os03g0736300
- Gene Symbol: OsGH9A3
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Our results showed that OsGH9A3 and B5 possessed an extremely high co-expression with OsCESA1, 3, and 8 typical for cellulose biosynthesis in rice.
- For the first time, OsGH9B1, 3, and 16 were characterized with the potential role in lignocellulose crystallinity alteration in rice, whereas OsGH9A3 and B5 were suggested for cellulose biosynthesis.
Function-related keywords:
Literature:
- Global identification of multiple OsGH9 family members and their involvement in cellulose crystallinity modification in rice . DOI: 10.1371/journal.pone.0050171 ; PMID: 23308094
- Conserved Imprinted Genes between Intra-Subspecies and Inter-Subspecies Are Involved in Energy Metabolism and Seed Development in Rice . DOI: 10.3390/ijms21249618 ; PMID: 33348666
Related News:
Gene Resources:
- NCBI ID: AK070408
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os03g52630.1
GAAACGAAAAGACGGGGGGCGACGAGGCGAGCGCGAGAAAGAGAAAGAGAGAGCAACGCCCCAACCACCACCCCCTCTGCCCAGGCCCCAGATCCCTCCACCCCATCGCACGCCACAACATAACATAACACCGCAAACACGCACCCTCCCAACAGACGCCTCCTCCCCTCCCTCCCTCCCACCTACACTCCGCTGCGCAGCCAGCTTCGCTCGCCCGCTACCTCACTCACTCTCGGGTGAGCGCGGCCACCGCTGCCGGCGACGAGGTAGGGAGGAGGAGGAGGGCAAGATGTTCGGGCGGGACCCGTGGGGCGGGCCGCTGGAGATCTCGAATGCGGACTCGGCGACGGACGACGACCGGAGCCGGGACCTGGACAGGGGGGCGCTGATGCGGCAGCTGGACGAGACGCAGCAGAGCTGGCTCCTGGCCGGGCCGGGCGACCAGGCCGGCAAGAAGAAGAAGAAGTACGTCGACCTCGGCTGCATGGTCCTCGACCGCAAGATCTTCATGTGGACCGTCGGCACCATCCTCGGCGTCGGCCTCTTCATCGGCTTCGTCATGATGATCGTCAAGCTCGTCCCCCACAAGCGCCCCCCTCCTCCTCCCCCCGACCAGTACACCCAGGCCCTCCACAAGGCCCTCATGTTCTTCAACGCGCAACGATCTGGTCCGCTGCCGAAGCATAACGGCGTCAGCTGGAGGGGGAATTCTTGCATGAAGGATGGCCTCTCCGACAGCACCGTCCGGAAGAGCTTGGTCGGAGGCTTCTACGACGCAGGAGACGCCATCAAGTTCAACTACCCCATGGCCTGGTCCATGACCATGCTCAGCTGGAGTGTGATCGAGTACAAGGCCAAGTATGAGGCGATCGGTGAGCTCGACCATGTCAAGGAGCTGATCAAGTGGGGCACAGATTACCTCCTCAAGACCTTCAATTCATCAGCCGATACTATCGATCGGATCGTCGCACAGGTGGGTGTAGGTGACACCTCAAAAGGTGGTGCCCAACCTAATGACCACTACTGCTGGATGAGGCCAGAGGATATCGATTACCCCAGACCTGTCACTGAGTGCCACTCTTGCTCAGATCTTGCTTCCGAAATGGCTGCTGCCCTTGCTGCAGCTTCCATAGTGTTCAAGGACAGCAAGACTTACTCTGACAAGCTCGTGCGTGGCGCAAAGGCCCTGTACAAGTTCGGTAGGCTGCAGCGTGGGAGATACAGCCCCAATGGCTCTGATCAAGCAATTTTCTACAATTCCACCAGTTACTGGGATGAGTTTGTGTGGGGTGGTGCGTGGATGTACTTTGCCACAGGGAACAATACATACCTATCGGTTGCAACAGCTCCGGGGATGGCAAAGCATGCTGGAGCATACTGGCTCGATAGTCCGAATTATGGAGTTTTTACCTGGGATGACAAGCTTCCAGGAGCTCAGGTTCTTCTGAGCAGGTTGCGGCTTTTCCTAAGTCCTGGATATCCTTACGAAGAAATACTGAGAACATTTCACAACCAAACAGACAATGTTATGTGCTCGTATCTGCCGATGTACAATTCATTCAACTTTACCAAAGGAGGAATGATACAGCTCAACCACGGAAGGCCTCAGCCACTTCAGTATGTTGTCAATGCGGCTTTCCTTGCCTCTCTATACAGCGATTACCTGGATGCTGCAGATACACCTGGGTGGTATTGTGGACCTACTTTCTACACTACAGAAGTCCTCCGCAAATTTGCAAGGTCACAGCTCGATTATGTCCTAGGTAAGAACCCACTGAAGATGAGCTACGTTGTGGGTTTTGGAAACAAGTACCCCAAGCGCGCTCATCACAGAGGTGCATCAATCCCTCATAATGGTGTCAAATATGGATGCAAAGGAGGCTTTAAATGGAGGGAGACTAAGAAGCCAAATCCTAATATCCTTATTGGAGCACTGGTTGCTGGCCCTGATAGGCATGATGGCTTCAAAGATGTCCGTACAAACTACAATTACACGGAGCCTACTCTTGCAGCAAATGCTGGCCTGGTGGCAGCCTTGATTTCCCTAACTAACATTCACGTCAAAAGTGGAATCGATAAGAACACCATCTTCTCTGCAGTTCCTCCGATGTTTCCAACTCCCCCACCTCCACCGTCAGCTTGGAAACCATGAAGAGTCAGATCGCTGAATATTTCTTGAGCATCAAACGGAGGGAACGACAGATGTTTGTTTGGTACAGCAAAGGACACATACAGAAAGCAGACAACATAAGCTTACAGAGCCTCTATTTTCTGTATCAGTATGACAGATCGGTATAAATTCATCTGTCGACAATAGACCGGGATGTTGTGTGCACCTTGTGAAACTAATTTTTGGGGTCCTTGTTGTTATTCGTTCAGAGCTCATGTGTGAAGTTCTTTTTGTAGAAATGGAACCTTTATAAACCGTTTTATAGGAGTGACTTTATCATCATACTAAAGGATTTGTGTAACCTTTATACAGCTTTCTTGATTCCATTTTTATCTCTTTGCCTTACATTTCAGCCACACTTCAGGGGCATGTTCAC - >LOC_Os03g52630.2
GAAACGAAAAGACGGGGGGCGACGAGGCGAGCGCGAGAAAGAGAAAGAGAGAGCAACGCCCCAACCACCACCCCCTCTGCCCAGGCCCCAGATCCCTCCACCCCATCGCACGCCACAACATAACATAACACCGCAAACACGCACCCTCCCAACAGACGCCTCCTCCCCTCCCTCCCTCCCACCTACACTCCGCTGCGCAGCCAGCTTCGCTCGCCCGCTACCTCACTCACTCTCGGGTGAGCGCGGCCACCGCTGCCGGCGACGAGGTAGGGAGGAGGAGGAGGGCAAGATGTTCGGGCGGGACCCGTGGGGCGGGCCGCTGGAGATCTCGAATGCGGACTCGGCGACGGACGACGACCGGAGCCGGGACCTGGACAGGGGGGCGCTGATGCGGCAGCTGGACGAGACGCAGCAGAGCTGGCTCCTGGCCGGGCCGGGCGACCAGGCCGGCAAGAAGAAGAAGAAGTACGTCGACCTCGGCTGCATGGTCCTCGACCGCAAGATCTTCATGTGGACCGTCGGCACCATCCTCGGCGTCGGCCTCTTCATCGGCTTCGTCATGATGATCGTCAAGCTCGTCCCCCACAAGCGCCCCCCTCCTCCTCCCCCCGACCAGTACACCCAGGCCCTCCACAAGGCCCTCATGTTCTTCAACGCGCAACGATCTGGTCCGCTGCCGAAGCATAACGGCGTCAGCTGGAGGGGGAATTCTTGCATGAAGGATGGCCTCTCCGACAGCACCGTCCGGAAGAGCTTGGTCGGAGGCTTCTACGACGCAGGAGACGCCATCAAGTTCAACTACCCCATGGCCTGGTCCATGACCATGCTCAGCTGGAGTGTGATCGAGTACAAGGCCAAGTATGAGGCGATCGGTGAGCTCGACCATGTCAAGGAGCTGATCAAGTGGGGCACAGATTACCTCCTCAAGACCTTCAATTCATCAGCCGATACTATCGATCGGATCGTCGCACAGGTGGGTGTAGGTGACACCTCAAAAGGTGGTGCCCAACCTAATGACCACTACTGCTGGATGAGGCCAGAGGATATCGATTACCCCAGACCTGTCACTGAGTGCCACTCTTGCTCAGATCTTGCTTCCGAAATGGCTGCTGCCCTTGCTGCAGCTTCCATAGTGTTCAAGGACAGCAAGACTTACTCTGACAAGCTCGTGCGTGGCGCAAAGGCCCTGTACAAGTTCGGTAGGCTGCAGCGTGGGAGATACAGCCCCAATGGCTCTGATCAAGCAATTTTCTACAATTCCACCAGTTACTGGGATGAGTTTGTGTGGGGTGGTGCGTGGATGTACTTTGCCACAGGGAACAATACATACCTATCGGTTGCAACAGCTCCGGGGATGGCAAAGCATGCTGGAGCATACTGGCTCGATAGTCCGAATTATGGAGTTTTTACCTGGGATGACAAGCTTCCAGGAGCTCAGGTTCTTCTGAGCAGGTTGCGGCTTTTCCTAAGTCCTGGATATCCTTACGAAGAAATACTGAGAACATTTCACAACCAAACAGACAATGTTATGTGCTCGTATCTGCCGATGTACAATTCATTCAACTTTACCAAAGGAGGAATGATACAGCTCAACCACGGAAGGCCTCAGCCACTTCAGTATGTTGTCAATGCGGCTTTCCTTGCCTCTCTATACAGCGATTACCTGGATGCTGCAGATACACCTGGGTGGTATTGTGGACCTACTTTCTACACTACAGAAGTCCTCCGCAAATTTGCAAGGTCACAGCTCGATTATGTCCTAGGTAAGAACCCACTGAAGATGAGCTACGTTGTGGGTTTTGGAAACAAGTACCCCAAGCGCGCTCATCACAGAGGTGCATCAATCCCTCATAATGGTGTCAAATATGGATGCAAAGGAGGCTTTAAATGGAGGGAGACTAAGAAGCCAAATCCTAATATCCTTATTGGAGCACTGGTTGCTGGCCCTGATAGGCATGATGGCTTCAAAGATGTCCGTACAAACTACAATTACACGGAGCCTACTCTTGCAGCAAATGCTGGCCTGGTGGCAGCCTTGATTTCCCTAACTAACATTCACGTCAAAAGTGGAATCGATAAGAACACCATCTTCTCTGCAGTTCCTCCGATGTTTCCAACTCCCCCACCTCCACCGTCAGCTTGGAAACCATGAAGAGTCAGATCGCTGAATATTTCTTGAGCATCAAACGGAGGGAACGACAGATGTTTGTTTGGTACAGCAAAGGACACATACAGAAAGCAGACAACATAAGCTTACAGAGCCTCTATTTTCTGTATCAGTATGACAGATCGGTATAAATTCATCTGTCGACAATAGACCGGGATGTTGTGTGCACCTTGTGAAACTAATTTTTGGGGTCCTTGTTGTTATTCGTTCAGAGCTCATGTGTGAAGTTCTTTTTGTAGAAATGGAACCTTTATAAACCGTTTTATAGGAGTGACTTTATCATCATACTAAAGGATTTGTGTAACCTTTATACAGCTTTCTTGATTCCATTTTTATCTCTTTGCCTTACATTTCAGCCACACTTCAGGGGCATGTTCAC
CDS Sequence
- >LOC_Os03g52630.1
ATGTTCGGGCGGGACCCGTGGGGCGGGCCGCTGGAGATCTCGAATGCGGACTCGGCGACGGACGACGACCGGAGCCGGGACCTGGACAGGGGGGCGCTGATGCGGCAGCTGGACGAGACGCAGCAGAGCTGGCTCCTGGCCGGGCCGGGCGACCAGGCCGGCAAGAAGAAGAAGAAGTACGTCGACCTCGGCTGCATGGTCCTCGACCGCAAGATCTTCATGTGGACCGTCGGCACCATCCTCGGCGTCGGCCTCTTCATCGGCTTCGTCATGATGATCGTCAAGCTCGTCCCCCACAAGCGCCCCCCTCCTCCTCCCCCCGACCAGTACACCCAGGCCCTCCACAAGGCCCTCATGTTCTTCAACGCGCAACGATCTGGTCCGCTGCCGAAGCATAACGGCGTCAGCTGGAGGGGGAATTCTTGCATGAAGGATGGCCTCTCCGACAGCACCGTCCGGAAGAGCTTGGTCGGAGGCTTCTACGACGCAGGAGACGCCATCAAGTTCAACTACCCCATGGCCTGGTCCATGACCATGCTCAGCTGGAGTGTGATCGAGTACAAGGCCAAGTATGAGGCGATCGGTGAGCTCGACCATGTCAAGGAGCTGATCAAGTGGGGCACAGATTACCTCCTCAAGACCTTCAATTCATCAGCCGATACTATCGATCGGATCGTCGCACAGGTGGGTGTAGGTGACACCTCAAAAGGTGGTGCCCAACCTAATGACCACTACTGCTGGATGAGGCCAGAGGATATCGATTACCCCAGACCTGTCACTGAGTGCCACTCTTGCTCAGATCTTGCTTCCGAAATGGCTGCTGCCCTTGCTGCAGCTTCCATAGTGTTCAAGGACAGCAAGACTTACTCTGACAAGCTCGTGCGTGGCGCAAAGGCCCTGTACAAGTTCGGTAGGCTGCAGCGTGGGAGATACAGCCCCAATGGCTCTGATCAAGCAATTTTCTACAATTCCACCAGTTACTGGGATGAGTTTGTGTGGGGTGGTGCGTGGATGTACTTTGCCACAGGGAACAATACATACCTATCGGTTGCAACAGCTCCGGGGATGGCAAAGCATGCTGGAGCATACTGGCTCGATAGTCCGAATTATGGAGTTTTTACCTGGGATGACAAGCTTCCAGGAGCTCAGGTTCTTCTGAGCAGGTTGCGGCTTTTCCTAAGTCCTGGATATCCTTACGAAGAAATACTGAGAACATTTCACAACCAAACAGACAATGTTATGTGCTCGTATCTGCCGATGTACAATTCATTCAACTTTACCAAAGGAGGAATGATACAGCTCAACCACGGAAGGCCTCAGCCACTTCAGTATGTTGTCAATGCGGCTTTCCTTGCCTCTCTATACAGCGATTACCTGGATGCTGCAGATACACCTGGGTGGTATTGTGGACCTACTTTCTACACTACAGAAGTCCTCCGCAAATTTGCAAGGTCACAGCTCGATTATGTCCTAGGTAAGAACCCACTGAAGATGAGCTACGTTGTGGGTTTTGGAAACAAGTACCCCAAGCGCGCTCATCACAGAGGTGCATCAATCCCTCATAATGGTGTCAAATATGGATGCAAAGGAGGCTTTAAATGGAGGGAGACTAAGAAGCCAAATCCTAATATCCTTATTGGAGCACTGGTTGCTGGCCCTGATAGGCATGATGGCTTCAAAGATGTCCGTACAAACTACAATTACACGGAGCCTACTCTTGCAGCAAATGCTGGCCTGGTGGCAGCCTTGATTTCCCTAACTAACATTCACGTCAAAAGTGGAATCGATAAGAACACCATCTTCTCTGCAGTTCCTCCGATGTTTCCAACTCCCCCACCTCCACCGTCAGCTTGGAAACCATGA - >LOC_Os03g52630.2
ATGTTCGGGCGGGACCCGTGGGGCGGGCCGCTGGAGATCTCGAATGCGGACTCGGCGACGGACGACGACCGGAGCCGGGACCTGGACAGGGGGGCGCTGATGCGGCAGCTGGACGAGACGCAGCAGAGCTGGCTCCTGGCCGGGCCGGGCGACCAGGCCGGCAAGAAGAAGAAGAAGTACGTCGACCTCGGCTGCATGGTCCTCGACCGCAAGATCTTCATGTGGACCGTCGGCACCATCCTCGGCGTCGGCCTCTTCATCGGCTTCGTCATGATGATCGTCAAGCTCGTCCCCCACAAGCGCCCCCCTCCTCCTCCCCCCGACCAGTACACCCAGGCCCTCCACAAGGCCCTCATGTTCTTCAACGCGCAACGATCTGGTCCGCTGCCGAAGCATAACGGCGTCAGCTGGAGGGGGAATTCTTGCATGAAGGATGGCCTCTCCGACAGCACCGTCCGGAAGAGCTTGGTCGGAGGCTTCTACGACGCAGGAGACGCCATCAAGTTCAACTACCCCATGGCCTGGTCCATGACCATGCTCAGCTGGAGTGTGATCGAGTACAAGGCCAAGTATGAGGCGATCGGTGAGCTCGACCATGTCAAGGAGCTGATCAAGTGGGGCACAGATTACCTCCTCAAGACCTTCAATTCATCAGCCGATACTATCGATCGGATCGTCGCACAGGTGGGTGTAGGTGACACCTCAAAAGGTGGTGCCCAACCTAATGACCACTACTGCTGGATGAGGCCAGAGGATATCGATTACCCCAGACCTGTCACTGAGTGCCACTCTTGCTCAGATCTTGCTTCCGAAATGGCTGCTGCCCTTGCTGCAGCTTCCATAGTGTTCAAGGACAGCAAGACTTACTCTGACAAGCTCGTGCGTGGCGCAAAGGCCCTGTACAAGTTCGGTAGGCTGCAGCGTGGGAGATACAGCCCCAATGGCTCTGATCAAGCAATTTTCTACAATTCCACCAGTTACTGGGATGAGTTTGTGTGGGGTGGTGCGTGGATGTACTTTGCCACAGGGAACAATACATACCTATCGGTTGCAACAGCTCCGGGGATGGCAAAGCATGCTGGAGCATACTGGCTCGATAGTCCGAATTATGGAGTTTTTACCTGGGATGACAAGCTTCCAGGAGCTCAGGTTCTTCTGAGCAGGTTGCGGCTTTTCCTAAGTCCTGGATATCCTTACGAAGAAATACTGAGAACATTTCACAACCAAACAGACAATGTTATGTGCTCGTATCTGCCGATGTACAATTCATTCAACTTTACCAAAGGAGGAATGATACAGCTCAACCACGGAAGGCCTCAGCCACTTCAGTATGTTGTCAATGCGGCTTTCCTTGCCTCTCTATACAGCGATTACCTGGATGCTGCAGATACACCTGGGTGGTATTGTGGACCTACTTTCTACACTACAGAAGTCCTCCGCAAATTTGCAAGGTCACAGCTCGATTATGTCCTAGGTAAGAACCCACTGAAGATGAGCTACGTTGTGGGTTTTGGAAACAAGTACCCCAAGCGCGCTCATCACAGAGGTGCATCAATCCCTCATAATGGTGTCAAATATGGATGCAAAGGAGGCTTTAAATGGAGGGAGACTAAGAAGCCAAATCCTAATATCCTTATTGGAGCACTGGTTGCTGGCCCTGATAGGCATGATGGCTTCAAAGATGTCCGTACAAACTACAATTACACGGAGCCTACTCTTGCAGCAAATGCTGGCCTGGTGGCAGCCTTGATTTCCCTAACTAACATTCACGTCAAAAGTGGAATCGATAAGAACACCATCTTCTCTGCAGTTCCTCCGATGTTTCCAACTCCCCCACCTCCACCGTCAGCTTGGAAACCATGA
Protein Sequence
- >LOC_Os03g52630.1
MFGRDPWGGPLEISNADSATDDDRSRDLDRGALMRQLDETQQSWLLAGPGDQAGKKKKKYVDLGCMVLDRKIFMWTVGTILGVGLFIGFVMMIVKLVPHKRPPPPPPDQYTQALHKALMFFNAQRSGPLPKHNGVSWRGNSCMKDGLSDSTVRKSLVGGFYDAGDAIKFNYPMAWSMTMLSWSVIEYKAKYEAIGELDHVKELIKWGTDYLLKTFNSSADTIDRIVAQVGVGDTSKGGAQPNDHYCWMRPEDIDYPRPVTECHSCSDLASEMAAALAAASIVFKDSKTYSDKLVRGAKALYKFGRLQRGRYSPNGSDQAIFYNSTSYWDEFVWGGAWMYFATGNNTYLSVATAPGMAKHAGAYWLDSPNYGVFTWDDKLPGAQVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPMYNSFNFTKGGMIQLNHGRPQPLQYVVNAAFLASLYSDYLDAADTPGWYCGPTFYTTEVLRKFARSQLDYVLGKNPLKMSYVVGFGNKYPKRAHHRGASIPHNGVKYGCKGGFKWRETKKPNPNILIGALVAGPDRHDGFKDVRTNYNYTEPTLAANAGLVAALISLTNIHVKSGIDKNTIFSAVPPMFPTPPPPPSAWKP* - >LOC_Os03g52630.2
MFGRDPWGGPLEISNADSATDDDRSRDLDRGALMRQLDETQQSWLLAGPGDQAGKKKKKYVDLGCMVLDRKIFMWTVGTILGVGLFIGFVMMIVKLVPHKRPPPPPPDQYTQALHKALMFFNAQRSGPLPKHNGVSWRGNSCMKDGLSDSTVRKSLVGGFYDAGDAIKFNYPMAWSMTMLSWSVIEYKAKYEAIGELDHVKELIKWGTDYLLKTFNSSADTIDRIVAQVGVGDTSKGGAQPNDHYCWMRPEDIDYPRPVTECHSCSDLASEMAAALAAASIVFKDSKTYSDKLVRGAKALYKFGRLQRGRYSPNGSDQAIFYNSTSYWDEFVWGGAWMYFATGNNTYLSVATAPGMAKHAGAYWLDSPNYGVFTWDDKLPGAQVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPMYNSFNFTKGGMIQLNHGRPQPLQYVVNAAFLASLYSDYLDAADTPGWYCGPTFYTTEVLRKFARSQLDYVLGKNPLKMSYVVGFGNKYPKRAHHRGASIPHNGVKYGCKGGFKWRETKKPNPNILIGALVAGPDRHDGFKDVRTNYNYTEPTLAANAGLVAALISLTNIHVKSGIDKNTIFSAVPPMFPTPPPPPSAWKP*