Information report for OsAPL1;OsAGPL3
Gene Details
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Functional Descriptions
- Subcellular localization studies using green fluorescent protein (GFP) fusion constructs indicate that OsAGPS2a, the product of the leaf-preferential transcript of OsAGPS2, and OsAGPS1, OsAGPL1, OsAGPL3, and OsAGPL4 are plastid-targeted isoforms.
- OsAPL3 was predominantly expressed in the middle phases of seed development, and OsAPS1, OsAPL1 and OsAPL2 were expressed later in seed development.
- Characterisation of the mutant (apl1) showed that the LSU encoded by OsAPL1 is required for AGPase activity in rice leaf blades.
- Two ADP-glucose pyrophosphorylase subunits, OsAGPL1 and OsAGPS1, modulate phosphorus homeostasis in rice.
Functional Keywords
Literature and News
- Identification of the ADP-glucose pyrophosphorylase isoforms essential for starch synthesis in the leaf and seed endosperm of rice (Oryza sativa L.) . DOI: 10.1007/s11103-007-9153-z ; PMID: 17406793
- A mutant of rice lacking the leaf large subunit of ADP-glucose pyrophosphorylase has drastically reduced leaf starch content but grows normally . DOI: 10.1071/FP06257 ; PMID: 32689377
- Expression profiling of genes involved in starch synthesis in sink and source organs of rice . DOI: 10.1093/jxb/eri292 ; PMID: 16275672
- Expression profiling of genes related to starch synthesis in rice leaf sheaths during the heading period . DOI: 10.1111/j.1399-3054.2006.00758.x
- Gene expression of ADP-glucose pyrophosphorylase and starch contents in rice cultured cells are cooperatively regulated by sucrose and ABA . DOI: 10.1093/pcp/pci101 ; PMID: 15821022
- Two ADP-glucose pyrophosphorylase subunits, OsAGPL1 and OsAGPS1, modulate phosphorus homeostasis in rice . DOI: 10.1111/tpj.14998 ; PMID: 32996185
Gene Resources
- UniProt: Q6AVT2
- EMBL: AC096689, AK069296, AP008209
- AlphaFoldDB: Q6AVT2
- EnsemblPlants: Os03t0735000-01
- Gramene: Os03t0735000-01
- KEGG: dosa:Os03g0735000
- Orthologous matrix: YRMDFSQ
- InterPro: IPR005835, IPR005836, IPR011004
- PANTHER: PTHR43523, PTHR43523:SF12
- SUPFAM: SSF51161, SSF53448
- PROSITE: PS00808, PS00809, PS00810
- Gene3D: 2.160.10.10, 3.90.550.10
- OrthoDB: Q6AVT2
- SWISS-MODEL: Q6AVT2
- Conserved Domain Database: cd02508, cd04651
- eggNOG: KOG1322
Sequences
cDNA Sequence
- >LOC_Os03g52460.1
CTCCACGCTGCGGCCGCCGCGGTTGTGTCCCTAGTGGAAAGTTGCACGAGCTCACGGGGGTCAGGCGACTAGGCGAGGAGAGAAGAGGAGAGGAGAGGAGAGGAGAGGTTTGGATTGGGAAGGATCACCAGCTCACCACCCGTTTCTCTCTCCGGCATTGCGAGGGGAAGGCGGCGACGGGAGGCGCGCGCGGGTGTAGACGCGTAGTGATGGCGGCGATGGACCTGCGGGTGGCCGCCCCGGCCTCCGTGGCCGCGGCGGCGCGGTGCGGCACGAGCCTGGCGAGGCCGTGGCCTGCCCGGGCGGTGGGAGGAGGAGGAGGAGGAGGAGGACGGGGCCGGCGTCTCTCCGTGCGGACGTCCGTCGCGACCACCGAGGCCGCCGCCGCCGCCGTGGGCGCCTCGGAGGACGCGGCGCTGGAGGCGCGGGACTCGAAGACGGTGGTGGCGGTCATCCTCGGCGGCGGCGCGGGGACGAGGCTGTTCCCGCTCACCAAGCGCAGGGCCAAGCCCGCGGTGCCCATTGGCGGAGCGTACAGGCTGATCGACGTGCCGATGAGCAACTGCATAAACAGCGGCATCAACAAGGTGTACATTCTCACCCAGTTCAACTCCGCGTCGCTCAACCGGCACCTTTCCCGGGCGTATAACTTCAGCAACGGCGTCGCGTTTGGAGATGGATTCGTCGAGGTCCTAGCAGCAACTCAGACGCCTGGATCGGAGGGAAAGAGGTGGTTTCAGGGTACAGCTGATGCTGTTCGGCAATTTGACTGGCTTTTTGATGATGCCAAAGCTAAAGACATCGATGATGTGCTGATTCTTTCTGGTGATCATCTCTACCGCATGGACTACATGGACTTTGTTCAGAGTCATCGGCAAAGAGGTGCAGACATCAGCATCTGTTGCTTGCCTATTGATGATAGCCGGGCATCTGATTTTGGTCTAATGAAGATAGACGACACAGGAAGAGTTATCGCATTTAGTGAAAAACCAAAAGGAGATGATTTAAAGGCAATGCAAGTTGACACCACTGTTCTAGGCTTACCACAGGATGAAGCAAAAGAGAAGCCATACATAGCGTCAATGGGGGTTTATATATTTAAGAAAGAGATACTTCTAAATCTTTTGAGATGGCGTTTTCCCACAGCAAATGACTTTGGATCTGAAATCATTCCTGCTTCAGCAAAAGAAATCAATGTAAAGGCATATCTTTTCAATGATTACTGGGAAGACATAGGAACTATAAAATCATTCTTTGAAGCCAATCTTTCTCTTGCTGAACAGCCACCGAGATTCAGCTTTTATGATGCTAATAAACCAATGTACACATCACGGAGAAACTTACCGCCATCTATGATCAATAATAGTAAGATCACTGATTCAATCATTTCCCATGGATGTTTCTTGGATAGCTGCAGGATAGAGCACAGTGTTGTTGGAATCCGTTCTAGGATAGGTTCCAATGTGCACCTCAAGGATACAGTAATGCTTGGTGCTGATTTCTATGAGACTGATCTGGAAAGAGGAGAACTGCTGGCTGAAGGAAAGGTTCCTATTGGAATCGGGGAGAATACAAAGATTCAGAACTGCATAATAGACAAGAATGCGAGGATAGGGAAGAATGTAACAATTTCCAACTCTGAGGGTGTACAGGAAGCAGATAGGACCTCTGAAGGCTTCTACATCCGATCAGGCATCACCATCGTATTAAAGAACTCGATAATTGCAGATGGATTAGTCATCTGAGGTGGAATAAAGCCCTCCCTTATCCAACCAGAAAAAGCCAGCCATGACCATTTGCGGCAGGAATAGAATAAAATCATCAGAGCTCTTTGTTCTTAGTTGTGTACTTAGCATTCAAGAGCTTCTGCATGTCTGTACAAAATCATTGTCTCGTGAATCTACCGTGTGTGTTTTCACACTAAACACATGGTCATGAAGCTCGAAAAAAAAAACAAAATTTTATGATCTGGGGTATTGGTTGTTCCATGTAATCTGCAGGCGAAGAAAACCTTACCTATCTACAGGTGTACTCTCTCCGTCAAAAAAAAAAAAACTTAATCTAGATGGGAATTTGACACAACCTTGAACAAC
CDS Sequence
- >LOC_Os03g52460.1
ATGGCGGCGATGGACCTGCGGGTGGCCGCCCCGGCCTCCGTGGCCGCGGCGGCGCGGTGCGGCACGAGCCTGGCGAGGCCGTGGCCTGCCCGGGCGGTGGGAGGAGGAGGAGGAGGAGGAGGACGGGGCCGGCGTCTCTCCGTGCGGACGTCCGTCGCGACCACCGAGGCCGCCGCCGCCGCCGTGGGCGCCTCGGAGGACGCGGCGCTGGAGGCGCGGGACTCGAAGACGGTGGTGGCGGTCATCCTCGGCGGCGGCGCGGGGACGAGGCTGTTCCCGCTCACCAAGCGCAGGGCCAAGCCCGCGGTGCCCATTGGCGGAGCGTACAGGCTGATCGACGTGCCGATGAGCAACTGCATAAACAGCGGCATCAACAAGGTGTACATTCTCACCCAGTTCAACTCCGCGTCGCTCAACCGGCACCTTTCCCGGGCGTATAACTTCAGCAACGGCGTCGCGTTTGGAGATGGATTCGTCGAGGTCCTAGCAGCAACTCAGACGCCTGGATCGGAGGGAAAGAGGTGGTTTCAGGGTACAGCTGATGCTGTTCGGCAATTTGACTGGCTTTTTGATGATGCCAAAGCTAAAGACATCGATGATGTGCTGATTCTTTCTGGTGATCATCTCTACCGCATGGACTACATGGACTTTGTTCAGAGTCATCGGCAAAGAGGTGCAGACATCAGCATCTGTTGCTTGCCTATTGATGATAGCCGGGCATCTGATTTTGGTCTAATGAAGATAGACGACACAGGAAGAGTTATCGCATTTAGTGAAAAACCAAAAGGAGATGATTTAAAGGCAATGCAAGTTGACACCACTGTTCTAGGCTTACCACAGGATGAAGCAAAAGAGAAGCCATACATAGCGTCAATGGGGGTTTATATATTTAAGAAAGAGATACTTCTAAATCTTTTGAGATGGCGTTTTCCCACAGCAAATGACTTTGGATCTGAAATCATTCCTGCTTCAGCAAAAGAAATCAATGTAAAGGCATATCTTTTCAATGATTACTGGGAAGACATAGGAACTATAAAATCATTCTTTGAAGCCAATCTTTCTCTTGCTGAACAGCCACCGAGATTCAGCTTTTATGATGCTAATAAACCAATGTACACATCACGGAGAAACTTACCGCCATCTATGATCAATAATAGTAAGATCACTGATTCAATCATTTCCCATGGATGTTTCTTGGATAGCTGCAGGATAGAGCACAGTGTTGTTGGAATCCGTTCTAGGATAGGTTCCAATGTGCACCTCAAGGATACAGTAATGCTTGGTGCTGATTTCTATGAGACTGATCTGGAAAGAGGAGAACTGCTGGCTGAAGGAAAGGTTCCTATTGGAATCGGGGAGAATACAAAGATTCAGAACTGCATAATAGACAAGAATGCGAGGATAGGGAAGAATGTAACAATTTCCAACTCTGAGGGTGTACAGGAAGCAGATAGGACCTCTGAAGGCTTCTACATCCGATCAGGCATCACCATCGTATTAAAGAACTCGATAATTGCAGATGGATTAGTCATCTGA
Protein Sequence
- >LOC_Os03g52460.1
MAAMDLRVAAPASVAAAARCGTSLARPWPARAVGGGGGGGGRGRRLSVRTSVATTEAAAAAVGASEDAALEARDSKTVVAVILGGGAGTRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHLSRAYNFSNGVAFGDGFVEVLAATQTPGSEGKRWFQGTADAVRQFDWLFDDAKAKDIDDVLILSGDHLYRMDYMDFVQSHRQRGADISICCLPIDDSRASDFGLMKIDDTGRVIAFSEKPKGDDLKAMQVDTTVLGLPQDEAKEKPYIASMGVYIFKKEILLNLLRWRFPTANDFGSEIIPASAKEINVKAYLFNDYWEDIGTIKSFFEANLSLAEQPPRFSFYDANKPMYTSRRNLPPSMINNSKITDSIISHGCFLDSCRIEHSVVGIRSRIGSNVHLKDTVMLGADFYETDLERGELLAEGKVPIGIGENTKIQNCIIDKNARIGKNVTISNSEGVQEADRTSEGFYIRSGITIVLKNSIIADGLVI*