Information report for OsHDR;OsHMBPP
Gene Details
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Functional Descriptions
- Differential Regulation of an OsIspH1, the Functional 4-Hydroxy-3-Methylbut-2-Enyl Diphosphate Reductase, for Photosynthetic Pigment Biosynthesis in Rice Leaves and Seeds.
- It confirmed the crucial role of OsIspH1 in plastidic terpenoid biosynthesis, revealing organ-specific differential regulation of OsIspH1 in rice plants.
Functional Keywords
Literature and News
- Elicitor induced activation of the methylerythritol phosphate pathway toward phytoalexins biosynthesis in rice . DOI: 10.1007/s11103-007-9207-2 ; PMID: 17634747
- Disruption of a Rice Chloroplast-Targeted Gene OsHMBPP Causes a Seedling-Lethal Albino Phenotype . DOI: 10.1186/s12284-020-00408-1 ; PMID: 32712772
- Differential Regulation of an OsIspH1, the Functional 4-Hydroxy-3-Methylbut-2-Enyl Diphosphate Reductase, for Photosynthetic Pigment Biosynthesis in Rice Leaves and Seeds . DOI: 10.3389/fpls.2022.861036 ; PMID: 35498655
Gene Resources
- UniProt: Q6AVG6
- EMBL: AC103550, AK064873, AK121561
- AlphaFoldDB: Q6AVG6
- EnsemblPlants: Os03t0731900-01
- Gramene: Os03t0731900-01
- KEGG: dosa:Os03g0731900
- Orthologous matrix: DRIWLTN
- InterPro: IPR003451
- PANTHER: PTHR31619, PTHR31619:SF5
- Gene3D: 3.40.1010.20, 3.40.50.11270
- OrthoDB: Q6AVG6
- SWISS-MODEL: Q6AVG6
- Conserved Domain Database: cd13944
- eggNOG: ENOG502QPIQ
Sequences
cDNA Sequence
- >LOC_Os03g52170.1
GTGGGGAGATCCCAACTCCGAATCCGACGCACCCACACCCATCCACTCCAGAGCTCCCCGCGGCACTTGGCACCACCACCACCACCACCGGCATCCGGCGGCGCGGGCGGTGATGGCGACCATCACCACGCAGCTCCGGTCGGCCCTCCTCTCGCCGGCGGCCTCGCCGAGCCGCCGTGCCAGGCGCGCCCCGTCGTCCGTGCGGTGCGACTCCTCGGCAGCGTCGTCCCTGTCCGCCTCCGCGTCGCTCGACGCCGACTTCGACAAGAAGCAGTTCCGCCACAACCTCACCCGCAGCGACAACTACAACCGCAAGGGCTTCGGCCACAAGAAGGAGACGCTCGAGCTCATGAGCCAGGAGTACACCAGCGACGTGATCAAGACGCTCAAGGAGAACGGGAACCAGCACACGTGGGGCCCCGTGACGGTGAAGCTGGCGGAGGCGTACGGCTTCTGCTGGGGCGTCGAGCGCGCCGTGCAGATCGCCTACGAGGCGCGCAAGCAGTTCCCCGACGATCGCATCTGGCTCACCAACGAGATCATCCACAACCCCACCGTCAACAAGCGATTGGAGGACATGGGCGTCCAAAACATTCCTGTTGATGCAGGTATTAAGGATTTCGATGTTGTCGAGCAAGGGGATGTTGTCGTATTGCCTGCATTTGGAGCGGCCGTGGAGGAGATGTACACGCTGAATGAGAAGAAGGTGCAGATAGTCGATACAACGTGCCCTTGGGTTTCAAAGGTGTGGAACATGGTTGAAAAGCACAAGAAGGGTGACTACACTTCTATTATTCATGGAAAATACTCCCATGAAGAAACTGTTGCCACTGCTTCCTTTGCAGGGACATACATCATTGTTAAGAACATAGCAGAGGCTAGCTATGTATGTGATTATATACTTGGTGGCCAACTTGATGGTTCTAGCTCCACAAAAGAGGAGTTCCTTGAGAAATTCAAAAATGCTGTTTCTCCAGGATTTGATCCTGATGTTGACTTAGTGAAAGTTGGCATTGCCAATCAAACAACAATGCTTAAAGGAGAAACTGAAGAAATTGGGAAGCTTGTTGAGAAGACAATGATGCGTAGGTTTGGAGTTGAGAATGTCAATGACCACTTCATTGCCTTCAACACTATCTGTGATGCCACACAGGAAAGACAAGATGCAATGTACCAGCTAGTGAAGGAGAAAGTTGATCTTATTCTGGTTGTTGGAGGATGGAACTCCAGTAACACCTCTCATTTGCAAGAAATTGGAGAACTCAGTGGAATTCCGTCTTACTGGATTGACAGTGAACAAAGGATTGGACCTGGAAACAAGATCAGCTACAAGTTAAATCATGGCGAGCTTGTCGAGAAAGAGAACTGGTTACCAGAAGGCCCTATCACAATCGGAGTTACTTCTGGCGCCTCAACTCCGGACAAGGTTGTTGAGGATGCGTTACAGAAGGTGTTTGAGATCAAGCGCCAGGAAGTTTTGCAGGCCGCGTAAATTTTCATCAGGTTTGGTCACGGTAGCTGATGGCTTGGTGAAGGTTAATAGAACCAGTGCACAAGCGATGTCTGTACAGTAGTGAAGAATGCTACGCTTTTAGGAGCGCATACTACGGCATGTGCTGAGATTTACGTAGTATGTTGGGGGCAAATGTTGTAATCAATTATCACACGAAGAACAGTTGCTGTATCGGCTGTCATAACTTTCTGACCCCCTCAAATAACGTTGCAGAAGTATCTTTCTTCGGTATAAATATCACCCAATTTGTTAGCTAGTACTATTTGATAGAGCTCAAATGCAGGACTCCCTGTATATATATGGCAAGTACAAGAAATGCAGGGTTCCCTATGTATAACATTAAGTTCAGAACCAATCTTGATATGCCACATATGTTGTTATAAAATTCCATTTCTCTCTGCAACTTTCATACTGTAGTAGTATTGTTCTTCAGCTTTTGAACAAAAAAAAATAATCAGTAGTAGCAGCTGTTAGCTCACGACCATTCTGTGTGTGTGTGTGTCGCCTCACTCCCATGACTTGACACACTGGGAGTGCGGCGGCCACCTGAGCACCGGCGACGCGCCGTCGCCGTCGAGGCGCCGCCGCGCCGCGGCGAGGACGGCCGCGAGGTCGGCGACCTTGGCGCGCATGGTCCGGCAGCAGTTGGCGTGCACGGTGGCGACCTCGCGGGCGTCGCGGCTGTCCTGGCAGAAGCCGCTGAAGCGCGCCGTGTCGAGGACGCGGGCGCGGACGCCGAGGCGGCGGAGCGCGCCGCGGCGCTTCATGTCGTTGAGCACGTCCTGCTCCTTCATTCCCGCCGAGCGGTCCCGCGCCGCGTGCCACTCGTCGAACAGCGCCGCCGTGCGGTTGTTGGAGGCCACGAAGAAGAAGCCGGTGTTGAGCTCGTTGCCGGCGATGTCGCCGGGGCGGCCGTTGAACTGGTCGGAGCTGATCAGGAGGTCCTCCTCCTCCGCCCTGTACTCCAGCCTCGACAACGGGTTCCTCAGCCACATCACATCCAAATCCTTG
CDS Sequence
- >LOC_Os03g52170.1
ATGGCGACCATCACCACGCAGCTCCGGTCGGCCCTCCTCTCGCCGGCGGCCTCGCCGAGCCGCCGTGCCAGGCGCGCCCCGTCGTCCGTGCGGTGCGACTCCTCGGCAGCGTCGTCCCTGTCCGCCTCCGCGTCGCTCGACGCCGACTTCGACAAGAAGCAGTTCCGCCACAACCTCACCCGCAGCGACAACTACAACCGCAAGGGCTTCGGCCACAAGAAGGAGACGCTCGAGCTCATGAGCCAGGAGTACACCAGCGACGTGATCAAGACGCTCAAGGAGAACGGGAACCAGCACACGTGGGGCCCCGTGACGGTGAAGCTGGCGGAGGCGTACGGCTTCTGCTGGGGCGTCGAGCGCGCCGTGCAGATCGCCTACGAGGCGCGCAAGCAGTTCCCCGACGATCGCATCTGGCTCACCAACGAGATCATCCACAACCCCACCGTCAACAAGCGATTGGAGGACATGGGCGTCCAAAACATTCCTGTTGATGCAGGTATTAAGGATTTCGATGTTGTCGAGCAAGGGGATGTTGTCGTATTGCCTGCATTTGGAGCGGCCGTGGAGGAGATGTACACGCTGAATGAGAAGAAGGTGCAGATAGTCGATACAACGTGCCCTTGGGTTTCAAAGGTGTGGAACATGGTTGAAAAGCACAAGAAGGGTGACTACACTTCTATTATTCATGGAAAATACTCCCATGAAGAAACTGTTGCCACTGCTTCCTTTGCAGGGACATACATCATTGTTAAGAACATAGCAGAGGCTAGCTATGTATGTGATTATATACTTGGTGGCCAACTTGATGGTTCTAGCTCCACAAAAGAGGAGTTCCTTGAGAAATTCAAAAATGCTGTTTCTCCAGGATTTGATCCTGATGTTGACTTAGTGAAAGTTGGCATTGCCAATCAAACAACAATGCTTAAAGGAGAAACTGAAGAAATTGGGAAGCTTGTTGAGAAGACAATGATGCGTAGGTTTGGAGTTGAGAATGTCAATGACCACTTCATTGCCTTCAACACTATCTGTGATGCCACACAGGAAAGACAAGATGCAATGTACCAGCTAGTGAAGGAGAAAGTTGATCTTATTCTGGTTGTTGGAGGATGGAACTCCAGTAACACCTCTCATTTGCAAGAAATTGGAGAACTCAGTGGAATTCCGTCTTACTGGATTGACAGTGAACAAAGGATTGGACCTGGAAACAAGATCAGCTACAAGTTAAATCATGGCGAGCTTGTCGAGAAAGAGAACTGGTTACCAGAAGGCCCTATCACAATCGGAGTTACTTCTGGCGCCTCAACTCCGGACAAGGTTGTTGAGGATGCGTTACAGAAGGTGTTTGAGATCAAGCGCCAGGAAGTTTTGCAGGCCGCGTAA
Protein Sequence
- >LOC_Os03g52170.1
MATITTQLRSALLSPAASPSRRARRAPSSVRCDSSAASSLSASASLDADFDKKQFRHNLTRSDNYNRKGFGHKKETLELMSQEYTSDVIKTLKENGNQHTWGPVTVKLAEAYGFCWGVERAVQIAYEARKQFPDDRIWLTNEIIHNPTVNKRLEDMGVQNIPVDAGIKDFDVVEQGDVVVLPAFGAAVEEMYTLNEKKVQIVDTTCPWVSKVWNMVEKHKKGDYTSIIHGKYSHEETVATASFAGTYIIVKNIAEASYVCDYILGGQLDGSSSTKEEFLEKFKNAVSPGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRRFGVENVNDHFIAFNTICDATQERQDAMYQLVKEKVDLILVVGGWNSSNTSHLQEIGELSGIPSYWIDSEQRIGPGNKISYKLNHGELVEKENWLPEGPITIGVTSGASTPDKVVEDALQKVFEIKRQEVLQAA*