Information report for OsWDR5a;OsWDR5
Gene Details
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Functional Descriptions
- Plants in which OsWDR5a or OsTrx1 expression was decreased by RNA interference produced fewer secondary branches and less grain, and exhibited a delayed heading date under long-day and short-day conditions, whereas loss of OsWDR5a function resulted in embryo lethality.
- OsWDR5a binds to Early heading date 1 (Ehd1) to regulate its H3K4me3 and expression levels.
Functional Keywords
Literature and News
Gene Resources
- UniProt: Q10DN8
- EMBL: AK105499, AK111860, AK112085
- AlphaFoldDB: Q10DN8
- EnsemblPlants: Os03t0725400-01, Os03t0725400-02, Os03t0725400-03
- Gramene: Os03t0725400-01, Os03t0725400-02, Os03t0725400-03
- KEGG: dosa:Os03g0725400, osa:4333964
- Orthologous matrix: CKGHDTA
- InterPro: IPR001680, IPR015943, IPR019775
Sequences
cDNA Sequence
- >LOC_Os03g51550.2
GAGGAGAGGGAGACGGAGACGAGGGATTTTTTTTCTTTCCCAAGAAATTTCCAAAACCCCAAACCCTTGTTCCCTTCCCCGTCTCCGGTTGGCGCGGCGCGGGGCAATGGCGGCGGAGGACAACCCGGGGTACGCCCTGCGCGCGACGCTGGCGGGCCACCGCCGCGCCGTGTCCGCCGTCAAGTTCTCCCCCGACGGCCGCCTCCTCGCGTCGGCCTCCGCCGACAAGCTCCTCCGCGTCTGGAGCACCTCCGACCTCGCCAGCCCCGTCGCCGAGCTCGCGGGCCACGGCGAGGGCGTCTCCGACCTCGCCTTCTCCCCCGACGGCCGCCTCATCGCCTCCGCCTCCGACGACCGCACCGTCCGCATCTGGGACCTCGGCGACGGCGGCGGCGGCGGCGGCGGCGGCGAGCCCCGCCTCATGAAGACGCTCTCCGGCCACACCAACTACGCCTTCTGCCTCGCCTTCAGCCCCCACGGCAACATGCTCGCCTCGGGCTCCTTCGACGAGACCGTCCGCGTCTGGGAGGTCAGGTCCGGGAGGTGCCTCCGCGTGCTCCCTGCGCACTCCGAGCCCGTCACCTCCGTCGACTTCAACCGCGACGGCGCCATGATCGTCTCCGGGAGCTACGACGGCCTCTGCCGCATTTGGGACTCCGCCACCGGCCACTGCATCAAGACCCTCATCGACGACGAGAGCCCGCCGGTCTCCTTCGCCAAGTTCTCGCCCAATGGGAAGTTCGTGCTTGCCGCCACTCTTGATAGCAAGCTGAGGCTCTGGAATTTCTCAGCTGGGAAATTTCTTAAGACATATACTGGCCATGTGAACACAAAATACTGCATTCCAGCAGCATTTTCAATCACCAATGGCAAGTATATTGTCAGTGGCTCGGAGGACAAGTGTGTCTACATATGGGATCTTCAGTCAAGAAAGATTTTGCAGAAATTGGAAGGTCATACTGACACAGTCATTGCAGTGTCATGCCACCCCAATGAAAACATGATTGCATCGGGAGGACTTGACGGCGATAAGACGGTGAAAGTATGGGTCCAAAAGGAGGAAGATCAGATGGAAGTCTAAGTGAGTTCTTATTGTCTCGACTGTCATGTAACCTGACTGATGATGGTTGGTAAGCTACTTAGCTTCCAGACTAATTATAGATTGGTGTGGTGGGGAATGTAATTGGATGCTGCTTTATCAGCTTTTCTCCTGGCTTCGTGGGTTGTGTTCTGGTGAACTCTTAATGAATTGGGATGGTTGTAACAAAGCCTGGACATAAAGAATTCTTAAACTTGATCTGCTCCCTTTTGTAGGTTATTTGCCTCTATGTGAAGTTACTATGCCTATGAAAATGCAAAATCAATTGTTCATAGGAGTATATGTTTTGGGGCTGTTGCCTGTTGGATACTTGGGCTTTGCTTTGCACTTTGAGTAGCCTTAGTTGGGCTTACATATGATATATGATGCTACCATTCTATTTGGCCTGCATGTTGACTAGCATGCACCGTAAGATTTACAGTTGTTTGACTAGCATTGGGAATTGGGCTGAACCATCTCTCTGAATAATGGAGCAGCTATTCCCTAAAAGAACTAAAAGAACAATGGGCCATCTGCTGGGAATCTGGGATT - >LOC_Os03g51550.1
GAGGAGAGGGAGACGGAGACGAGGGATTTTTTTTCTTTCCCAAGAAATTTCCAAAACCCCAAACCCTTGTTCCCTTCCCCGTCTCCGGTTGGCGCGGCGCGGGGCAATGGCGGCGGAGGACAACCCGGGGTACGCCCTGCGCGCGACGCTGGCGGGCCACCGCCGCGCCGTGTCCGCCGTCAAGTTCTCCCCCGACGGCCGCCTCCTCGCGTCGGCCTCCGCCGACAAGCTCCTCCGCGTCTGGAGCACCTCCGACCTCGCCAGCCCCGTCGCCGAGCTCGCGGGCCACGGCGAGGGCGTCTCCGACCTCGCCTTCTCCCCCGACGGCCGCCTCATCGCCTCCGCCTCCGACGACCGCACCGTCCGCATCTGGGACCTCGGCGACGGCGGCGGCGGCGGCGGCGGCGGCGAGCCCCGCCTCATGAAGACGCTCTCCGGCCACACCAACTACGCCTTCTGCCTCGCCTTCAGCCCCCACGGCAACATGCTCGCCTCGGGCTCCTTCGACGAGACCGTCCGCGTCTGGGAGGTCAGGTCCGGGAGGTGCCTCCGCGTGCTCCCTGCGCACTCCGAGCCCGTCACCTCCGTCGACTTCAACCGCGACGGCGCCATGATCGTCTCCGGGAGCTACGACGGCCTCTGCCGCATTTGGGACTCCGCCACCGGCCACTGCATCAAGACCCTCATCGACGACGAGAGCCCGCCGGTCTCCTTCGCCAAGTTCTCGCCCAATGGGAAGTTCGTGCTTGCCGCCACTCTTGATAGCAAGCTGAGGCTCTGGAATTTCTCAGCTGGGAAATTTCTTAAGACATATACTGGCCATGTGAACACAAAATACTGCATTCCAGCAGCATTTTCAATCACCAATGGCAAGTATATTGTCAGTGGCTCGGAGGACAAGTGTGTCTACATATGGGATCTTCAGTCAAGAAAGATTTTGCAGAAATTGGAAGGTCATACTGACACAGTCATTGCAGTGTCATGCCACCCCAATGAAAACATGATTGCATCGGGAGGACTTGACGGCGATAAGACGGTGAAAGTATGGGTCCAAAAGGAGGAAGATCAGATGGAAGTCTAAGTGAGTTCTTATTGTCTCGACTGTCATGTAACCTGACTGATGATGGTTGGTAAGCTACTTAGCTTCCAGACTAATTATAGATTGGTGTGGTGGGGAATGTAATTGGATGCTGCTTTATCAGCTTTTCTCCTGGCTTCGTGGGTTGTGTTCTGGTGAACTCTTAATGAATTGGGATGGTTGTAACAAAGCCTGGACATAAAGAATTCTTAAACTTGATCTGCTCCCTTTTGTAGGTTATTTGCCTCTATGTGAAGTTACTATGCCTATGAAAATGCAAAATCAATTGTTCATAGGAGTATATGTTTTGGGGCTGTTGCCTGTTGGATACTTGGGCTTTGCTTTGCACTTTGAGTAGCCTTAGTTGGGCTTACATATGATATATGATGCTACCATTCTATTTGGCCTGCATGTTGACTAGCATGCACCGTAAGATTTACAGTTGTTTGACTAGCATTGGGAATTGGGCTGAACCATCTCTCTGAATAATGGAGCAGCTATTCCCTAAAAGAACTAAAAGAACAATGGGCCATCTGCTGGGAATCTGGGATT - >LOC_Os03g51550.3
GAGGAGAGGGAGACGGAGACGAGGGATTTTTTTTCTTTCCCAAGAAATTTCCAAAACCCCAAACCCTTGTTCCCTTCCCCGTCTCCGGTTGGCGCGGCGCGGGGCAATGGCGGCGGAGGACAACCCGGGGTACGCCCTGCGCGCGACGCTGGCGGGCCACCGCCGCGCCGTGTCCGCCGTCAAGTTCTCCCCCGACGGCCGCCTCCTCGCGTCGGCCTCCGCCGACAAGCTCCTCCGCGTCTGGAGCACCTCCGACCTCGCCAGCCCCGTCGCCGAGCTCGCGGGCCACGGCGAGGGCGTCTCCGACCTCGCCTTCTCCCCCGACGGCCGCCTCATCGCCTCCGCCTCCGACGACCGCACCGTCCGCATCTGGGACCTCGGCGACGGCGGCGGCGGCGGCGGCGGCGGCGAGCCCCGCCTCATGAAGACGCTCTCCGGCCACACCAACTACGCCTTCTGCCTCGCCTTCAGCCCCCACGGCAACATGCTCGCCTCGGGCTCCTTCGACGAGACCGTCCGCGTCTGGGAGGTCAGGTCCGGGAGGTGCCTCCGCGTGCTCCCTGCGCACTCCGAGCCCGTCACCTCCGTCGACTTCAACCGCGACGGCGCCATGATCGTCTCCGGGAGCTACGACGGCCTCTGCCGCATTTGGGACTCCGCCACCGGCCACTGCATCAAGACCCTCATCGACGACGAGAGCCCGCCGGTCTCCTTCGCCAAGTTCTCGCCCAATGGGAAGTTCGTGCTTGCCGCCACTCTTGATAGCAAGCTGAGGCTCTGGAATTTCTCAGCTGGGAAATTTCTTAAGACATATACTGGCCATGTGAACACAAAATACTGCATTCCAGCAGCATTTTCAATCACCAATGGCAAGTATATTGTCAGTGGCTCGGAGGACAAGTGTGTCTACATATGGGATCTTCAGTCAAGAAAGATTTTGCAGAAATTGGAAGGTCATACTGACACAGTCATTGCAGTGTCATGCCACCCCAATGAAAACATGATTGCATCGGGAGGACTTGACGGCGATAAGACGGTGAAAGTATGGGTCCAAAAGGAGGAAGATCAGATGGAAGTCTAAGTGAGTTCTTATTGTCTCGACTGTCATGTAACCTGACTGATGATGGTTGGTAAGCTACTTAGCTTCCAGACTAATTATAGATTGGTGTGGTGGGGAATGTAATTGGATGCTGCTTTATCAGCTTTTCTCCTGGCTTCGTGGGTTGTGTTCTGGTGAACTCTTAATGAATTGGGATGGTTGTAACAAAGCCTGGACATAAAGAATTCTTAAACTTGATCTGCTCCCTTTTGTAGGTTATTTGCCTCTATGTGAAGTTACTATGCCTATGAAAATGCAAAATCAATTGTTCATAGGAGTATATGTTTTGGGGCTGTTGCCTGTTGGATACTTGGGCTTTGCTTTGCACTTTGAGTAGCCTTAGTTGGGCTTACATATGATATATGATGCTACCATTCTATTTGGCCTGCATGTTGACTAGCATGCACCGTAAGATTTACAGTTGTTTGACTAGCATTGGGAATTGGGCTGAACCATCTCTCTGAATAATGGAGCAGCTATTCCCTAAAAGAACTAAAAGAACAATGGGCCATCTGCTGGGAATCTGGGATT
CDS Sequence
- >LOC_Os03g51550.2
ATGGCGGCGGAGGACAACCCGGGGTACGCCCTGCGCGCGACGCTGGCGGGCCACCGCCGCGCCGTGTCCGCCGTCAAGTTCTCCCCCGACGGCCGCCTCCTCGCGTCGGCCTCCGCCGACAAGCTCCTCCGCGTCTGGAGCACCTCCGACCTCGCCAGCCCCGTCGCCGAGCTCGCGGGCCACGGCGAGGGCGTCTCCGACCTCGCCTTCTCCCCCGACGGCCGCCTCATCGCCTCCGCCTCCGACGACCGCACCGTCCGCATCTGGGACCTCGGCGACGGCGGCGGCGGCGGCGGCGGCGGCGAGCCCCGCCTCATGAAGACGCTCTCCGGCCACACCAACTACGCCTTCTGCCTCGCCTTCAGCCCCCACGGCAACATGCTCGCCTCGGGCTCCTTCGACGAGACCGTCCGCGTCTGGGAGGTCAGGTCCGGGAGGTGCCTCCGCGTGCTCCCTGCGCACTCCGAGCCCGTCACCTCCGTCGACTTCAACCGCGACGGCGCCATGATCGTCTCCGGGAGCTACGACGGCCTCTGCCGCATTTGGGACTCCGCCACCGGCCACTGCATCAAGACCCTCATCGACGACGAGAGCCCGCCGGTCTCCTTCGCCAAGTTCTCGCCCAATGGGAAGTTCGTGCTTGCCGCCACTCTTGATAGCAAGCTGAGGCTCTGGAATTTCTCAGCTGGGAAATTTCTTAAGACATATACTGGCCATGTGAACACAAAATACTGCATTCCAGCAGCATTTTCAATCACCAATGGCAAGTATATTGTCAGTGGCTCGGAGGACAAGTGTGTCTACATATGGGATCTTCAGTCAAGAAAGATTTTGCAGAAATTGGAAGGTCATACTGACACAGTCATTGCAGTGTCATGCCACCCCAATGAAAACATGATTGCATCGGGAGGACTTGACGGCGATAAGACGGTGAAAGTATGGGTCCAAAAGGAGGAAGATCAGATGGAAGTCTAA - >LOC_Os03g51550.1
ATGGCGGCGGAGGACAACCCGGGGTACGCCCTGCGCGCGACGCTGGCGGGCCACCGCCGCGCCGTGTCCGCCGTCAAGTTCTCCCCCGACGGCCGCCTCCTCGCGTCGGCCTCCGCCGACAAGCTCCTCCGCGTCTGGAGCACCTCCGACCTCGCCAGCCCCGTCGCCGAGCTCGCGGGCCACGGCGAGGGCGTCTCCGACCTCGCCTTCTCCCCCGACGGCCGCCTCATCGCCTCCGCCTCCGACGACCGCACCGTCCGCATCTGGGACCTCGGCGACGGCGGCGGCGGCGGCGGCGGCGGCGAGCCCCGCCTCATGAAGACGCTCTCCGGCCACACCAACTACGCCTTCTGCCTCGCCTTCAGCCCCCACGGCAACATGCTCGCCTCGGGCTCCTTCGACGAGACCGTCCGCGTCTGGGAGGTCAGGTCCGGGAGGTGCCTCCGCGTGCTCCCTGCGCACTCCGAGCCCGTCACCTCCGTCGACTTCAACCGCGACGGCGCCATGATCGTCTCCGGGAGCTACGACGGCCTCTGCCGCATTTGGGACTCCGCCACCGGCCACTGCATCAAGACCCTCATCGACGACGAGAGCCCGCCGGTCTCCTTCGCCAAGTTCTCGCCCAATGGGAAGTTCGTGCTTGCCGCCACTCTTGATAGCAAGCTGAGGCTCTGGAATTTCTCAGCTGGGAAATTTCTTAAGACATATACTGGCCATGTGAACACAAAATACTGCATTCCAGCAGCATTTTCAATCACCAATGGCAAGTATATTGTCAGTGGCTCGGAGGACAAGTGTGTCTACATATGGGATCTTCAGTCAAGAAAGATTTTGCAGAAATTGGAAGGTCATACTGACACAGTCATTGCAGTGTCATGCCACCCCAATGAAAACATGATTGCATCGGGAGGACTTGACGGCGATAAGACGGTGAAAGTATGGGTCCAAAAGGAGGAAGATCAGATGGAAGTCTAA - >LOC_Os03g51550.3
ATGGCGGCGGAGGACAACCCGGGGTACGCCCTGCGCGCGACGCTGGCGGGCCACCGCCGCGCCGTGTCCGCCGTCAAGTTCTCCCCCGACGGCCGCCTCCTCGCGTCGGCCTCCGCCGACAAGCTCCTCCGCGTCTGGAGCACCTCCGACCTCGCCAGCCCCGTCGCCGAGCTCGCGGGCCACGGCGAGGGCGTCTCCGACCTCGCCTTCTCCCCCGACGGCCGCCTCATCGCCTCCGCCTCCGACGACCGCACCGTCCGCATCTGGGACCTCGGCGACGGCGGCGGCGGCGGCGGCGGCGGCGAGCCCCGCCTCATGAAGACGCTCTCCGGCCACACCAACTACGCCTTCTGCCTCGCCTTCAGCCCCCACGGCAACATGCTCGCCTCGGGCTCCTTCGACGAGACCGTCCGCGTCTGGGAGGTCAGGTCCGGGAGGTGCCTCCGCGTGCTCCCTGCGCACTCCGAGCCCGTCACCTCCGTCGACTTCAACCGCGACGGCGCCATGATCGTCTCCGGGAGCTACGACGGCCTCTGCCGCATTTGGGACTCCGCCACCGGCCACTGCATCAAGACCCTCATCGACGACGAGAGCCCGCCGGTCTCCTTCGCCAAGTTCTCGCCCAATGGGAAGTTCGTGCTTGCCGCCACTCTTGATAGCAAGCTGAGGCTCTGGAATTTCTCAGCTGGGAAATTTCTTAAGACATATACTGGCCATGTGAACACAAAATACTGCATTCCAGCAGCATTTTCAATCACCAATGGCAAGTATATTGTCAGTGGCTCGGAGGACAAGTGTGTCTACATATGGGATCTTCAGTCAAGAAAGATTTTGCAGAAATTGGAAGGTCATACTGACACAGTCATTGCAGTGTCATGCCACCCCAATGAAAACATGATTGCATCGGGAGGACTTGACGGCGATAAGACGGTGAAAGTATGGGTCCAAAAGGAGGAAGATCAGATGGAAGTCTAA
Protein Sequence
- >LOC_Os03g51550.2
MAAEDNPGYALRATLAGHRRAVSAVKFSPDGRLLASASADKLLRVWSTSDLASPVAELAGHGEGVSDLAFSPDGRLIASASDDRTVRIWDLGDGGGGGGGGEPRLMKTLSGHTNYAFCLAFSPHGNMLASGSFDETVRVWEVRSGRCLRVLPAHSEPVTSVDFNRDGAMIVSGSYDGLCRIWDSATGHCIKTLIDDESPPVSFAKFSPNGKFVLAATLDSKLRLWNFSAGKFLKTYTGHVNTKYCIPAAFSITNGKYIVSGSEDKCVYIWDLQSRKILQKLEGHTDTVIAVSCHPNENMIASGGLDGDKTVKVWVQKEEDQMEV* - >LOC_Os03g51550.1
MAAEDNPGYALRATLAGHRRAVSAVKFSPDGRLLASASADKLLRVWSTSDLASPVAELAGHGEGVSDLAFSPDGRLIASASDDRTVRIWDLGDGGGGGGGGEPRLMKTLSGHTNYAFCLAFSPHGNMLASGSFDETVRVWEVRSGRCLRVLPAHSEPVTSVDFNRDGAMIVSGSYDGLCRIWDSATGHCIKTLIDDESPPVSFAKFSPNGKFVLAATLDSKLRLWNFSAGKFLKTYTGHVNTKYCIPAAFSITNGKYIVSGSEDKCVYIWDLQSRKILQKLEGHTDTVIAVSCHPNENMIASGGLDGDKTVKVWVQKEEDQMEV* - >LOC_Os03g51550.3
MAAEDNPGYALRATLAGHRRAVSAVKFSPDGRLLASASADKLLRVWSTSDLASPVAELAGHGEGVSDLAFSPDGRLIASASDDRTVRIWDLGDGGGGGGGGEPRLMKTLSGHTNYAFCLAFSPHGNMLASGSFDETVRVWEVRSGRCLRVLPAHSEPVTSVDFNRDGAMIVSGSYDGLCRIWDSATGHCIKTLIDDESPPVSFAKFSPNGKFVLAATLDSKLRLWNFSAGKFLKTYTGHVNTKYCIPAAFSITNGKYIVSGSEDKCVYIWDLQSRKILQKLEGHTDTVIAVSCHPNENMIASGGLDGDKTVKVWVQKEEDQMEV*