Gene Details:
- MSU gene ID: LOC_Os03g50940
- RAPdb gene ID: Os03g0718600
- Gene Symbol: COX11 OsCOX11
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- In CMS-WA lines, WA352 accumulates preferentially in the anther tapetum, thereby inhibiting COX11 function in peroxide metabolism and triggering premature tapetal programmed cell death and consequent pollen abortion.
- Here we report that a new mitochondrial gene, WA352, which originated recently in wild rice, confers CMS-WA because the protein it encodes interacts with the nuclear-encoded mitochondrial protein COX11.
Function-related keywords:
- cell-death , tapetum , pollen , anther , mitochondria , tapetal
Literature:
- A detrimental mitochondrial-nuclear interaction causes cytoplasmic male sterility in rice . DOI: 10.1038/ng.2570 ; PMID: 23502780
- Multi-step formation, evolution, and functionalization of new cytoplasmic male sterility genes in the plant mitochondrial genomes . DOI: 10.1038/cr.2016.115 ; PMID: 27725674
- Crystal structure of WA352 provides insight into cytoplasmic male sterility in rice . DOI: 10.1016/j.bbrc.2018.05.079 ; PMID: 29775612
- The Fungal Effector Avr-Pita Suppresses Innate Immunity by Increasing COX Activity in Rice Mitochondria . DOI: 10.1186/s12284-021-00453-4 ; PMID: 33443630
- Variations in OsSPL10 confer drought tolerance by directly regulating OsNAC2 expression and ROS production in rice . DOI: 10.1111/jipb.13414 ; PMID: 36401566
Related News:
Gene Resources:
- NCBI ID: EF431929
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os03g50940.1
GTAGCGTCGAACACCGTACAGCGAATCGCGGCGGCGGAATCACACATCGCCGCCTCTCGCACGCGCCGCCGCGATGCCGCCGCCGCCGCCGCCTTCGTTGGCCAGGCTCCACCAACGCCTCTCCCTCTCGCTCCTCCGGGGACGCTCCCCCCCCGCGGCGGCCGACGCCTTCCTCCGCCGCGGGCTCGCCTCGTCCGCCTCCTCCTCCTCTTCCGCCGCCGCCGCCGCGGCGGTGGCGGCGGCGGCGGCAGGCCGGGAGAAGAGCTCGAGGAGGACGCTAGCGTACCTGCTAGGCGTGGCCGCGGCGATGGTCGGCGCCTCCTACGCCGCCGTCCCGCTCTACCGCCGCTTCTGCCAGGCCACCGGCTATGGCGGCACCGTCCAGCGCCGCGAGAGTGTGGAGGAGAAGATCTCACGACATGCTCGAGACGGAACAACAACTTCAAGAGAGATAATTGTCCAATTTAATGCTGACGTTGCTGATGGAATGCCGTGGAAATTCATTCCAACACAGAGAGAAGTGAAGGTTAAACCTGGTGAAAGTGCTCTTGCATTTTATACTGCTGAAAATCGTAGTTCAGCTCCAATAACTGGTGTATCCACATATAACGTAGCTCCTATGAAGGCTGCAATATATTTCAATAAGATACAATGTTTTTGCTTTGAGGAGCAAACACTTCTTCCAGGGGAGCAGATTGACATGCCGGTGTTCTTCTACATCGATCCTGAGTTTGAGACAGACCCCAAAATGGAAGGGGTGAACAATATTGTCCTTTCTTACACATTCTTTAAGGTGAACGACAGTTAATTGTATCGGTACCGTAAAGTAAGTGGTAACATTAGTTCTATTTAAACACCTTGCCAACGAGTAACACAAAAATTCCTTTCATGTAACACAAGTTAGGGTTTTGTTTAGTGTGTATTAATTGACATGTGTTTCTTGGAAATTTTGCAAATAAATATGTAAGAATTGTTCACAGAACAATCGAAATGGTGCATCTTGATTTGATTTGAAGTACCATGAGGATAAGAAATGGTCACCACAA - >LOC_Os03g50940.2
GTAGCGTCGAACACCGTACAGCGAATCGCGGCGGCGGAATCACACATCGCCGCCTCTCGCACGCGCCGCCGCGATGCCGCCGCCGCCGCCGCCTTCGTTGGCCAGGCTCCACCAACGCCTCTCCCTCTCGCTCCTCCGGGGACGCTCCCCCCCCGCGGCGGCCGACGCCTTCCTCCGCCGCGGGCTCGCCTCGTCCGCCTCCTCCTCCTCTTCCGCCGCCGCCGCCGCGGCGGTGGCGGCGGCGGCGGCAGGCCGGGAGAAGAGCTCGAGGAGGACGCTAGCGTACCTGCTAGGCGTGGCCGCGGCGATGGTCGGCGCCTCCTACGCCGCCGTCCCGCTCTACCGCCGCTTCTGCCAGGCCACCGGCTATGGCGGCACCGTCCAGCGCCGCGAGAGTGTGGAGGAGAAGATCTCACGACATGCTCGAGACGGAACAACAACTTCAAGAGAGATAATTGTCCAATTTAATGCTGACGTTGCTGATGGAATGCCGTGGAAATTCATTCCAACACAGAGAGAAGTGAAGGTTAAACCTGGTGAAAGTGCTCTTGCATTTTATACTGCTGAAAATCGTAGTTCAGCTCCAATAACTGGTGTATCCACATATAACGTAGCTCCTATGAAGGCTGCAATATATTTCAATAAGATACAATGTTTTTGCTTTGAGGAGCAAACACTTCTTCCAGGGGAGCAGATTGACATGCCGGTGTTCTTCTACATCGATCCTGAGTTTGAGACAGACCCCAAAATGGAAGGGGTGAACAATATTGTCCTTTCTTACACATTCTTTAAGGTGAACGACAGTTAATTGTATCGGTACCGTAAAGTAAGTGGTAACATTAGTTCTATTTAAACACCTTGCCAACGAGTAACACAAAAATTCCTTTCATGTAACACAAGTTAGGGTTTTGTTTAGTGTGTATTAATTGACATGTGTTTCTTGGAAATTTTGCAAATAAATATGTAAGAATTGTTCACAGAACAATCGAAATGGTGCATCTTGATTTGATTTGAAGTACCATGAGGATAAGAAATGGTCACCACAA
CDS Sequence
- >LOC_Os03g50940.1
ATGCCGCCGCCGCCGCCGCCTTCGTTGGCCAGGCTCCACCAACGCCTCTCCCTCTCGCTCCTCCGGGGACGCTCCCCCCCCGCGGCGGCCGACGCCTTCCTCCGCCGCGGGCTCGCCTCGTCCGCCTCCTCCTCCTCTTCCGCCGCCGCCGCCGCGGCGGTGGCGGCGGCGGCGGCAGGCCGGGAGAAGAGCTCGAGGAGGACGCTAGCGTACCTGCTAGGCGTGGCCGCGGCGATGGTCGGCGCCTCCTACGCCGCCGTCCCGCTCTACCGCCGCTTCTGCCAGGCCACCGGCTATGGCGGCACCGTCCAGCGCCGCGAGAGTGTGGAGGAGAAGATCTCACGACATGCTCGAGACGGAACAACAACTTCAAGAGAGATAATTGTCCAATTTAATGCTGACGTTGCTGATGGAATGCCGTGGAAATTCATTCCAACACAGAGAGAAGTGAAGGTTAAACCTGGTGAAAGTGCTCTTGCATTTTATACTGCTGAAAATCGTAGTTCAGCTCCAATAACTGGTGTATCCACATATAACGTAGCTCCTATGAAGGCTGCAATATATTTCAATAAGATACAATGTTTTTGCTTTGAGGAGCAAACACTTCTTCCAGGGGAGCAGATTGACATGCCGGTGTTCTTCTACATCGATCCTGAGTTTGAGACAGACCCCAAAATGGAAGGGGTGAACAATATTGTCCTTTCTTACACATTCTTTAAGGTGAACGACAGTTAA - >LOC_Os03g50940.2
ATGCCGCCGCCGCCGCCGCCTTCGTTGGCCAGGCTCCACCAACGCCTCTCCCTCTCGCTCCTCCGGGGACGCTCCCCCCCCGCGGCGGCCGACGCCTTCCTCCGCCGCGGGCTCGCCTCGTCCGCCTCCTCCTCCTCTTCCGCCGCCGCCGCCGCGGCGGTGGCGGCGGCGGCGGCAGGCCGGGAGAAGAGCTCGAGGAGGACGCTAGCGTACCTGCTAGGCGTGGCCGCGGCGATGGTCGGCGCCTCCTACGCCGCCGTCCCGCTCTACCGCCGCTTCTGCCAGGCCACCGGCTATGGCGGCACCGTCCAGCGCCGCGAGAGTGTGGAGGAGAAGATCTCACGACATGCTCGAGACGGAACAACAACTTCAAGAGAGATAATTGTCCAATTTAATGCTGACGTTGCTGATGGAATGCCGTGGAAATTCATTCCAACACAGAGAGAAGTGAAGGTTAAACCTGGTGAAAGTGCTCTTGCATTTTATACTGCTGAAAATCGTAGTTCAGCTCCAATAACTGGTGTATCCACATATAACGTAGCTCCTATGAAGGCTGCAATATATTTCAATAAGATACAATGTTTTTGCTTTGAGGAGCAAACACTTCTTCCAGGGGAGCAGATTGACATGCCGGTGTTCTTCTACATCGATCCTGAGTTTGAGACAGACCCCAAAATGGAAGGGGTGAACAATATTGTCCTTTCTTACACATTCTTTAAGGTGAACGACAGTTAA
Protein Sequence
- >LOC_Os03g50940.1
MPPPPPPSLARLHQRLSLSLLRGRSPPAAADAFLRRGLASSASSSSSAAAAAAVAAAAAGREKSSRRTLAYLLGVAAAMVGASYAAVPLYRRFCQATGYGGTVQRRESVEEKISRHARDGTTTSREIIVQFNADVADGMPWKFIPTQREVKVKPGESALAFYTAENRSSAPITGVSTYNVAPMKAAIYFNKIQCFCFEEQTLLPGEQIDMPVFFYIDPEFETDPKMEGVNNIVLSYTFFKVNDS* - >LOC_Os03g50940.2
MPPPPPPSLARLHQRLSLSLLRGRSPPAAADAFLRRGLASSASSSSSAAAAAAVAAAAAGREKSSRRTLAYLLGVAAAMVGASYAAVPLYRRFCQATGYGGTVQRRESVEEKISRHARDGTTTSREIIVQFNADVADGMPWKFIPTQREVKVKPGESALAFYTAENRSSAPITGVSTYNVAPMKAAIYFNKIQCFCFEEQTLLPGEQIDMPVFFYIDPEFETDPKMEGVNNIVLSYTFFKVNDS*