Information report for COX11;OsCOX11
Gene Details
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Functional Descriptions
- In CMS-WA lines, WA352 accumulates preferentially in the anther tapetum, thereby inhibiting COX11 function in peroxide metabolism and triggering premature tapetal programmed cell death and consequent pollen abortion.
- Here we report that a new mitochondrial gene, WA352, which originated recently in wild rice, confers CMS-WA because the protein it encodes interacts with the nuclear-encoded mitochondrial protein COX11.
Functional Keywords
- cell-death , tapetum , pollen , anther , mitochondria , tapetal
Literature and News
- A detrimental mitochondrial-nuclear interaction causes cytoplasmic male sterility in rice . DOI: 10.1038/ng.2570 ; PMID: 23502780
- Multi-step formation, evolution, and functionalization of new cytoplasmic male sterility genes in the plant mitochondrial genomes . DOI: 10.1038/cr.2016.115 ; PMID: 27725674
- Crystal structure of WA352 provides insight into cytoplasmic male sterility in rice . DOI: 10.1016/j.bbrc.2018.05.079 ; PMID: 29775612
- The Fungal Effector Avr-Pita Suppresses Innate Immunity by Increasing COX Activity in Rice Mitochondria . DOI: 10.1186/s12284-021-00453-4 ; PMID: 33443630
- Variations in OsSPL10 confer drought tolerance by directly regulating OsNAC2 expression and ROS production in rice . DOI: 10.1111/jipb.13414 ; PMID: 36401566
Gene Resources
- UniProt: Q10DV4
- EMBL: AP014959, DP000009
- AlphaFoldDB: Q10DV4
- EnsemblPlants: Os03t0718600-00
- Gramene: Os03t0718600-00
- KEGG: osa:4333922
- Orthologous matrix: NKLECFC
- InterPro: IPR007533, IPR023471
- PANTHER: PTHR21320, PTHR21320:SF3
- SUPFAM: SSF110111
- Gene3D: 2.60.370.10
- OrthoDB: Q10DV4
- SWISS-MODEL: Q10DV4
- eggNOG: KOG2540
Sequences
cDNA Sequence
- >LOC_Os03g50940.1
GTAGCGTCGAACACCGTACAGCGAATCGCGGCGGCGGAATCACACATCGCCGCCTCTCGCACGCGCCGCCGCGATGCCGCCGCCGCCGCCGCCTTCGTTGGCCAGGCTCCACCAACGCCTCTCCCTCTCGCTCCTCCGGGGACGCTCCCCCCCCGCGGCGGCCGACGCCTTCCTCCGCCGCGGGCTCGCCTCGTCCGCCTCCTCCTCCTCTTCCGCCGCCGCCGCCGCGGCGGTGGCGGCGGCGGCGGCAGGCCGGGAGAAGAGCTCGAGGAGGACGCTAGCGTACCTGCTAGGCGTGGCCGCGGCGATGGTCGGCGCCTCCTACGCCGCCGTCCCGCTCTACCGCCGCTTCTGCCAGGCCACCGGCTATGGCGGCACCGTCCAGCGCCGCGAGAGTGTGGAGGAGAAGATCTCACGACATGCTCGAGACGGAACAACAACTTCAAGAGAGATAATTGTCCAATTTAATGCTGACGTTGCTGATGGAATGCCGTGGAAATTCATTCCAACACAGAGAGAAGTGAAGGTTAAACCTGGTGAAAGTGCTCTTGCATTTTATACTGCTGAAAATCGTAGTTCAGCTCCAATAACTGGTGTATCCACATATAACGTAGCTCCTATGAAGGCTGCAATATATTTCAATAAGATACAATGTTTTTGCTTTGAGGAGCAAACACTTCTTCCAGGGGAGCAGATTGACATGCCGGTGTTCTTCTACATCGATCCTGAGTTTGAGACAGACCCCAAAATGGAAGGGGTGAACAATATTGTCCTTTCTTACACATTCTTTAAGGTGAACGACAGTTAATTGTATCGGTACCGTAAAGTAAGTGGTAACATTAGTTCTATTTAAACACCTTGCCAACGAGTAACACAAAAATTCCTTTCATGTAACACAAGTTAGGGTTTTGTTTAGTGTGTATTAATTGACATGTGTTTCTTGGAAATTTTGCAAATAAATATGTAAGAATTGTTCACAGAACAATCGAAATGGTGCATCTTGATTTGATTTGAAGTACCATGAGGATAAGAAATGGTCACCACAA - >LOC_Os03g50940.2
GTAGCGTCGAACACCGTACAGCGAATCGCGGCGGCGGAATCACACATCGCCGCCTCTCGCACGCGCCGCCGCGATGCCGCCGCCGCCGCCGCCTTCGTTGGCCAGGCTCCACCAACGCCTCTCCCTCTCGCTCCTCCGGGGACGCTCCCCCCCCGCGGCGGCCGACGCCTTCCTCCGCCGCGGGCTCGCCTCGTCCGCCTCCTCCTCCTCTTCCGCCGCCGCCGCCGCGGCGGTGGCGGCGGCGGCGGCAGGCCGGGAGAAGAGCTCGAGGAGGACGCTAGCGTACCTGCTAGGCGTGGCCGCGGCGATGGTCGGCGCCTCCTACGCCGCCGTCCCGCTCTACCGCCGCTTCTGCCAGGCCACCGGCTATGGCGGCACCGTCCAGCGCCGCGAGAGTGTGGAGGAGAAGATCTCACGACATGCTCGAGACGGAACAACAACTTCAAGAGAGATAATTGTCCAATTTAATGCTGACGTTGCTGATGGAATGCCGTGGAAATTCATTCCAACACAGAGAGAAGTGAAGGTTAAACCTGGTGAAAGTGCTCTTGCATTTTATACTGCTGAAAATCGTAGTTCAGCTCCAATAACTGGTGTATCCACATATAACGTAGCTCCTATGAAGGCTGCAATATATTTCAATAAGATACAATGTTTTTGCTTTGAGGAGCAAACACTTCTTCCAGGGGAGCAGATTGACATGCCGGTGTTCTTCTACATCGATCCTGAGTTTGAGACAGACCCCAAAATGGAAGGGGTGAACAATATTGTCCTTTCTTACACATTCTTTAAGGTGAACGACAGTTAATTGTATCGGTACCGTAAAGTAAGTGGTAACATTAGTTCTATTTAAACACCTTGCCAACGAGTAACACAAAAATTCCTTTCATGTAACACAAGTTAGGGTTTTGTTTAGTGTGTATTAATTGACATGTGTTTCTTGGAAATTTTGCAAATAAATATGTAAGAATTGTTCACAGAACAATCGAAATGGTGCATCTTGATTTGATTTGAAGTACCATGAGGATAAGAAATGGTCACCACAA
CDS Sequence
- >LOC_Os03g50940.1
ATGCCGCCGCCGCCGCCGCCTTCGTTGGCCAGGCTCCACCAACGCCTCTCCCTCTCGCTCCTCCGGGGACGCTCCCCCCCCGCGGCGGCCGACGCCTTCCTCCGCCGCGGGCTCGCCTCGTCCGCCTCCTCCTCCTCTTCCGCCGCCGCCGCCGCGGCGGTGGCGGCGGCGGCGGCAGGCCGGGAGAAGAGCTCGAGGAGGACGCTAGCGTACCTGCTAGGCGTGGCCGCGGCGATGGTCGGCGCCTCCTACGCCGCCGTCCCGCTCTACCGCCGCTTCTGCCAGGCCACCGGCTATGGCGGCACCGTCCAGCGCCGCGAGAGTGTGGAGGAGAAGATCTCACGACATGCTCGAGACGGAACAACAACTTCAAGAGAGATAATTGTCCAATTTAATGCTGACGTTGCTGATGGAATGCCGTGGAAATTCATTCCAACACAGAGAGAAGTGAAGGTTAAACCTGGTGAAAGTGCTCTTGCATTTTATACTGCTGAAAATCGTAGTTCAGCTCCAATAACTGGTGTATCCACATATAACGTAGCTCCTATGAAGGCTGCAATATATTTCAATAAGATACAATGTTTTTGCTTTGAGGAGCAAACACTTCTTCCAGGGGAGCAGATTGACATGCCGGTGTTCTTCTACATCGATCCTGAGTTTGAGACAGACCCCAAAATGGAAGGGGTGAACAATATTGTCCTTTCTTACACATTCTTTAAGGTGAACGACAGTTAA - >LOC_Os03g50940.2
ATGCCGCCGCCGCCGCCGCCTTCGTTGGCCAGGCTCCACCAACGCCTCTCCCTCTCGCTCCTCCGGGGACGCTCCCCCCCCGCGGCGGCCGACGCCTTCCTCCGCCGCGGGCTCGCCTCGTCCGCCTCCTCCTCCTCTTCCGCCGCCGCCGCCGCGGCGGTGGCGGCGGCGGCGGCAGGCCGGGAGAAGAGCTCGAGGAGGACGCTAGCGTACCTGCTAGGCGTGGCCGCGGCGATGGTCGGCGCCTCCTACGCCGCCGTCCCGCTCTACCGCCGCTTCTGCCAGGCCACCGGCTATGGCGGCACCGTCCAGCGCCGCGAGAGTGTGGAGGAGAAGATCTCACGACATGCTCGAGACGGAACAACAACTTCAAGAGAGATAATTGTCCAATTTAATGCTGACGTTGCTGATGGAATGCCGTGGAAATTCATTCCAACACAGAGAGAAGTGAAGGTTAAACCTGGTGAAAGTGCTCTTGCATTTTATACTGCTGAAAATCGTAGTTCAGCTCCAATAACTGGTGTATCCACATATAACGTAGCTCCTATGAAGGCTGCAATATATTTCAATAAGATACAATGTTTTTGCTTTGAGGAGCAAACACTTCTTCCAGGGGAGCAGATTGACATGCCGGTGTTCTTCTACATCGATCCTGAGTTTGAGACAGACCCCAAAATGGAAGGGGTGAACAATATTGTCCTTTCTTACACATTCTTTAAGGTGAACGACAGTTAA
Protein Sequence
- >LOC_Os03g50940.1
MPPPPPPSLARLHQRLSLSLLRGRSPPAAADAFLRRGLASSASSSSSAAAAAAVAAAAAGREKSSRRTLAYLLGVAAAMVGASYAAVPLYRRFCQATGYGGTVQRRESVEEKISRHARDGTTTSREIIVQFNADVADGMPWKFIPTQREVKVKPGESALAFYTAENRSSAPITGVSTYNVAPMKAAIYFNKIQCFCFEEQTLLPGEQIDMPVFFYIDPEFETDPKMEGVNNIVLSYTFFKVNDS* - >LOC_Os03g50940.2
MPPPPPPSLARLHQRLSLSLLRGRSPPAAADAFLRRGLASSASSSSSAAAAAAVAAAAAGREKSSRRTLAYLLGVAAAMVGASYAAVPLYRRFCQATGYGGTVQRRESVEEKISRHARDGTTTSREIIVQFNADVADGMPWKFIPTQREVKVKPGESALAFYTAENRSSAPITGVSTYNVAPMKAAIYFNKIQCFCFEEQTLLPGEQIDMPVFFYIDPEFETDPKMEGVNNIVLSYTFFKVNDS*