Gene Details:

Functional Descriptions:

  • In CMS-WA lines, WA352 accumulates preferentially in the anther tapetum, thereby inhibiting COX11 function in peroxide metabolism and triggering premature tapetal programmed cell death and consequent pollen abortion.
  • Here we report that a new mitochondrial gene, WA352, which originated recently in wild rice, confers CMS-WA because the protein it encodes interacts with the nuclear-encoded mitochondrial protein COX11.

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >LOC_Os03g50940.1
    GTAGCGTCGAACACCGTACAGCGAATCGCGGCGGCGGAATCACACATCGCCGCCTCTCGCACGCGCCGCCGCGATGCCGCCGCCGCCGCCGCCTTCGTTGGCCAGGCTCCACCAACGCCTCTCCCTCTCGCTCCTCCGGGGACGCTCCCCCCCCGCGGCGGCCGACGCCTTCCTCCGCCGCGGGCTCGCCTCGTCCGCCTCCTCCTCCTCTTCCGCCGCCGCCGCCGCGGCGGTGGCGGCGGCGGCGGCAGGCCGGGAGAAGAGCTCGAGGAGGACGCTAGCGTACCTGCTAGGCGTGGCCGCGGCGATGGTCGGCGCCTCCTACGCCGCCGTCCCGCTCTACCGCCGCTTCTGCCAGGCCACCGGCTATGGCGGCACCGTCCAGCGCCGCGAGAGTGTGGAGGAGAAGATCTCACGACATGCTCGAGACGGAACAACAACTTCAAGAGAGATAATTGTCCAATTTAATGCTGACGTTGCTGATGGAATGCCGTGGAAATTCATTCCAACACAGAGAGAAGTGAAGGTTAAACCTGGTGAAAGTGCTCTTGCATTTTATACTGCTGAAAATCGTAGTTCAGCTCCAATAACTGGTGTATCCACATATAACGTAGCTCCTATGAAGGCTGCAATATATTTCAATAAGATACAATGTTTTTGCTTTGAGGAGCAAACACTTCTTCCAGGGGAGCAGATTGACATGCCGGTGTTCTTCTACATCGATCCTGAGTTTGAGACAGACCCCAAAATGGAAGGGGTGAACAATATTGTCCTTTCTTACACATTCTTTAAGGTGAACGACAGTTAATTGTATCGGTACCGTAAAGTAAGTGGTAACATTAGTTCTATTTAAACACCTTGCCAACGAGTAACACAAAAATTCCTTTCATGTAACACAAGTTAGGGTTTTGTTTAGTGTGTATTAATTGACATGTGTTTCTTGGAAATTTTGCAAATAAATATGTAAGAATTGTTCACAGAACAATCGAAATGGTGCATCTTGATTTGATTTGAAGTACCATGAGGATAAGAAATGGTCACCACAA
  • >LOC_Os03g50940.2
    GTAGCGTCGAACACCGTACAGCGAATCGCGGCGGCGGAATCACACATCGCCGCCTCTCGCACGCGCCGCCGCGATGCCGCCGCCGCCGCCGCCTTCGTTGGCCAGGCTCCACCAACGCCTCTCCCTCTCGCTCCTCCGGGGACGCTCCCCCCCCGCGGCGGCCGACGCCTTCCTCCGCCGCGGGCTCGCCTCGTCCGCCTCCTCCTCCTCTTCCGCCGCCGCCGCCGCGGCGGTGGCGGCGGCGGCGGCAGGCCGGGAGAAGAGCTCGAGGAGGACGCTAGCGTACCTGCTAGGCGTGGCCGCGGCGATGGTCGGCGCCTCCTACGCCGCCGTCCCGCTCTACCGCCGCTTCTGCCAGGCCACCGGCTATGGCGGCACCGTCCAGCGCCGCGAGAGTGTGGAGGAGAAGATCTCACGACATGCTCGAGACGGAACAACAACTTCAAGAGAGATAATTGTCCAATTTAATGCTGACGTTGCTGATGGAATGCCGTGGAAATTCATTCCAACACAGAGAGAAGTGAAGGTTAAACCTGGTGAAAGTGCTCTTGCATTTTATACTGCTGAAAATCGTAGTTCAGCTCCAATAACTGGTGTATCCACATATAACGTAGCTCCTATGAAGGCTGCAATATATTTCAATAAGATACAATGTTTTTGCTTTGAGGAGCAAACACTTCTTCCAGGGGAGCAGATTGACATGCCGGTGTTCTTCTACATCGATCCTGAGTTTGAGACAGACCCCAAAATGGAAGGGGTGAACAATATTGTCCTTTCTTACACATTCTTTAAGGTGAACGACAGTTAATTGTATCGGTACCGTAAAGTAAGTGGTAACATTAGTTCTATTTAAACACCTTGCCAACGAGTAACACAAAAATTCCTTTCATGTAACACAAGTTAGGGTTTTGTTTAGTGTGTATTAATTGACATGTGTTTCTTGGAAATTTTGCAAATAAATATGTAAGAATTGTTCACAGAACAATCGAAATGGTGCATCTTGATTTGATTTGAAGTACCATGAGGATAAGAAATGGTCACCACAA
CDS Sequence
  • >LOC_Os03g50940.1
    ATGCCGCCGCCGCCGCCGCCTTCGTTGGCCAGGCTCCACCAACGCCTCTCCCTCTCGCTCCTCCGGGGACGCTCCCCCCCCGCGGCGGCCGACGCCTTCCTCCGCCGCGGGCTCGCCTCGTCCGCCTCCTCCTCCTCTTCCGCCGCCGCCGCCGCGGCGGTGGCGGCGGCGGCGGCAGGCCGGGAGAAGAGCTCGAGGAGGACGCTAGCGTACCTGCTAGGCGTGGCCGCGGCGATGGTCGGCGCCTCCTACGCCGCCGTCCCGCTCTACCGCCGCTTCTGCCAGGCCACCGGCTATGGCGGCACCGTCCAGCGCCGCGAGAGTGTGGAGGAGAAGATCTCACGACATGCTCGAGACGGAACAACAACTTCAAGAGAGATAATTGTCCAATTTAATGCTGACGTTGCTGATGGAATGCCGTGGAAATTCATTCCAACACAGAGAGAAGTGAAGGTTAAACCTGGTGAAAGTGCTCTTGCATTTTATACTGCTGAAAATCGTAGTTCAGCTCCAATAACTGGTGTATCCACATATAACGTAGCTCCTATGAAGGCTGCAATATATTTCAATAAGATACAATGTTTTTGCTTTGAGGAGCAAACACTTCTTCCAGGGGAGCAGATTGACATGCCGGTGTTCTTCTACATCGATCCTGAGTTTGAGACAGACCCCAAAATGGAAGGGGTGAACAATATTGTCCTTTCTTACACATTCTTTAAGGTGAACGACAGTTAA
  • >LOC_Os03g50940.2
    ATGCCGCCGCCGCCGCCGCCTTCGTTGGCCAGGCTCCACCAACGCCTCTCCCTCTCGCTCCTCCGGGGACGCTCCCCCCCCGCGGCGGCCGACGCCTTCCTCCGCCGCGGGCTCGCCTCGTCCGCCTCCTCCTCCTCTTCCGCCGCCGCCGCCGCGGCGGTGGCGGCGGCGGCGGCAGGCCGGGAGAAGAGCTCGAGGAGGACGCTAGCGTACCTGCTAGGCGTGGCCGCGGCGATGGTCGGCGCCTCCTACGCCGCCGTCCCGCTCTACCGCCGCTTCTGCCAGGCCACCGGCTATGGCGGCACCGTCCAGCGCCGCGAGAGTGTGGAGGAGAAGATCTCACGACATGCTCGAGACGGAACAACAACTTCAAGAGAGATAATTGTCCAATTTAATGCTGACGTTGCTGATGGAATGCCGTGGAAATTCATTCCAACACAGAGAGAAGTGAAGGTTAAACCTGGTGAAAGTGCTCTTGCATTTTATACTGCTGAAAATCGTAGTTCAGCTCCAATAACTGGTGTATCCACATATAACGTAGCTCCTATGAAGGCTGCAATATATTTCAATAAGATACAATGTTTTTGCTTTGAGGAGCAAACACTTCTTCCAGGGGAGCAGATTGACATGCCGGTGTTCTTCTACATCGATCCTGAGTTTGAGACAGACCCCAAAATGGAAGGGGTGAACAATATTGTCCTTTCTTACACATTCTTTAAGGTGAACGACAGTTAA
Protein Sequence
  • >LOC_Os03g50940.1
    MPPPPPPSLARLHQRLSLSLLRGRSPPAAADAFLRRGLASSASSSSSAAAAAAVAAAAAGREKSSRRTLAYLLGVAAAMVGASYAAVPLYRRFCQATGYGGTVQRRESVEEKISRHARDGTTTSREIIVQFNADVADGMPWKFIPTQREVKVKPGESALAFYTAENRSSAPITGVSTYNVAPMKAAIYFNKIQCFCFEEQTLLPGEQIDMPVFFYIDPEFETDPKMEGVNNIVLSYTFFKVNDS*
  • >LOC_Os03g50940.2
    MPPPPPPSLARLHQRLSLSLLRGRSPPAAADAFLRRGLASSASSSSSAAAAAAVAAAAAGREKSSRRTLAYLLGVAAAMVGASYAAVPLYRRFCQATGYGGTVQRRESVEEKISRHARDGTTTSREIIVQFNADVADGMPWKFIPTQREVKVKPGESALAFYTAENRSSAPITGVSTYNVAPMKAAIYFNKIQCFCFEEQTLLPGEQIDMPVFFYIDPEFETDPKMEGVNNIVLSYTFFKVNDS*