Gene Details:

Functional Descriptions:

  • Map-based cloning demonstrated that TIP3 encodes a conserved PHD-finger protein and further study confirmed TIP3 functioned as a transcription factor with transcriptional activation activity.
  • The TIP3 mutant displayed smaller and pale yellow anthers without mature pollen grains, abnormal Ubisch body morphology, no pollen wall formation as well as delayed tapetum degeneration.
  • Moreover, TIP3 can physically interact with TDR which is a key component of the transcriptional cascade in regulating tapetum development and pollen wall formation.
  • Taken together, our results reveal an unprecedented role of TIP3 in regulating Ubisch bodies and pollen exine formation, which presents a potential tool to manipulate male fertility for hybrid rice breeding.
  • TIP3 is preferentially expressed in the tapetum and microspores during anther development.
  • Furthermore, disruption of TIP3 changed the expression of several genes involved in tapetum development and degradation, biosynthesis and transport of lipid monomers of sporopollenin in TIP3 mutant.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os03g50780.1
    AAGGAGAGCCCAGGGCAATGCCGTCCATGCGCGCGCTCGAGCGGCTCGCCTCGTGGCCGACGCCCCCGCCGCCACCTCCGCCGCCGCCGCCGCCGGCGAAGGCGGCGGCGGCGGAGGCGGAGAGGCCGTGTCCGCCGTCGTCCGCCGCCACCACCTCGTCGTCGTCTTCTTCCTCGGCCTCGGCCGCGCCCGCGGCGGCGGGGGCGCCGCGCGTCTACCCGCTGCGGGACTTCCCGGGGAGGGAGGCGGCGGGGCTGGGCGGCGCGTTCCGGGACAACGTGCGGTGGCTGCTGAGGCAGTGGGGCGGCGCCTCCCCCGCCTCCCCCGCCGCCGGGGGTCCTGGGTCGGCGTCGGCGGCGGTGGCGGTGGCGTGGCGGGTGCTCCTCTCCGACGACCGCACCGGCGTCGTCGTCCCCATCTTCGCCGTCGAGGAGCCCGTCGCGTCCTCGCCCAAGCCGCTCTGCGATTACTGCCGCTGGGCGGGTTGGAGCCACCATTGGGTGTCAAAGCGGAAGTACCATTTCATTATTCCGGCGCCCGCTGACTGGGACCGCCAGCTTGCTGCTGATGTGATCCTTGGACGCACCGACCACCTCCTCCATGGCCTGATCCACAGCAATGGTTTTGGTCACCTTGTCATGCTCCGTGGTCGCGATGGCGGCTCCACTGCACTATCTGGCCGTGACATCATGGACATCTGGGATTGCCTCTGCTCCGCTCTTCGTGCCAGGGCTGTGTCTGTGGTGGACTTTTCCCAGAAACGCTCTCTGGATCTTCGTCTCCTGCTCAGCGTGGCACATGGTGACACATGGTTCACCCGATGGGGATACTGCCTTGCAAGGGGTTGCTTCTGTGTGTCTACCTCGACCTATGCAGCTTCCGTGGAAGCGTTGGCTGCCCTGCCTGTGGACTATCTTCGCAGCCGTCACGTCCGCCGTGTGGTAACCATTTACCGCCGCCTATCCAACAAACCTCTGGTTACAGTCCGTGAGTTCCTCCGCTGCCTCCTTGATTGGAAGCACCTTGAGCCACCCCTTCAATTACCTCCTGTGAAGACATGCACACGGCTGCAATTCATGCTGCCAAAGCCATCTGTGATGAAGAGACACAGGCAGCAGCCATGCCAGCGCTTTGAGGATGTGATTGACCTGCTCCAGTGTCGCTGGTCCAAGAAGCGGCTTCTTGATGCTGCAGAGGTTGTTGTTGACAGGCTGCTAGAGCATGGCAGCGGGGCAGAGATGACACGGCAGGCGGTGCGAGATGCTGCAAGGGGCGCCATTGGTGATACTGGTCTCCTTGACTTTGTCATCAAGTCCCTTGGTGATACCATTGTTGGCAACTATATTGTGCGACGTGTGCCTGATGCTGAAACACGTGTGCTTCACTTTAGCCTTGAGGAATATGAAGAGCCAACACCAGCACTGTTGGATGTTGAGGTAGAGTGCACACCATTGCCACCTGTGGTACGGTGGCCTAGCACAGTGGAAGTAGAGCGAGATCTGCGTGCTGTCTACCGAGCAATGGTCGAGGTGCGCAGTGAGGCAGCACAGGCTGTGCTGGACTGCAAGCACTGGGTGAAGTGGTGGGGCCTTGGGGATGAGTCCGATGACCAGCTGAGGTTTTTCGTTGAGTGGCAACCCCAGCCATGGGAAGCTGCTGAGCTTATACGGCCAATGCCACTGGGGGAGATTGTGGTGGTACCACTCCATGCATCCATGGGTGAGCTTCTTGTCGAGTCAGAGCATGCGCTGCGGGACACTTACTACTTCTTTGAGGAATTCCAGGCTGAAGGGCTGCATGGCATTGCTGGGGAGAAATGGGATCCAGTGATGCTTGGTGGGGCAGAGAATGGTGACACAATCAGCGTGTATGGCAATGGGGCAGACATGGAAACTGAGCTGCGGTGCCATGGTGGACTTGACTTGTGGGAGGTGCGGTGCGTGTGTGGTGCGCAGGATGATGATGGTGAGCGCATGATAGCATGCGATGCTTGCGATGTATGGCACCACACACGTTGCGTGGGCATTGCAGACAGCGAGCCTGTGCCACCATTATTTCTTTGTGTGCTCTGCGGTGGTGCGCTCATGGCGGCTGGACCGATCAATTCTTGAAGAGGCACTAACGCTACCTGAAAGCCAAGTGACTATTCTATTCTTTTCCCCTTTCTTACTTCCCTTCGGTTCATATTTCCAGTGACGATAGTCTGACGAGGTAAACTTAGTTCTGAAACTGCAACTTATGGTGTAAAGTGCGTTGTTTTGGCAGTATGTAGTAACTTCTAATGCTGTGTAGTAAGTAGTAGATGGGAAGCGGGTTTAGACAGTAGACTTGGGGAAGCCCTATCCATGTCGTTAGCAATTCGACTGGAAATTTTGTACCTGATACACTACAGAAGATGATATAGCTAGATGTAAATACATGTTCTGTGATTGTATCTTTTACGGCCTCCCAGTCCCAATTGGTGAAGCTATACAGTGTAATTTTTTGTGCTAGGTATACAATGTAATTTAGCATCAGCAATGACAAAACTGTATCTTTCTTCTGTGCTGGTGTTTGCTTTCTTGTTAGCCA
CDS Sequence
  • >LOC_Os03g50780.1
    ATGCCGTCCATGCGCGCGCTCGAGCGGCTCGCCTCGTGGCCGACGCCCCCGCCGCCACCTCCGCCGCCGCCGCCGCCGGCGAAGGCGGCGGCGGCGGAGGCGGAGAGGCCGTGTCCGCCGTCGTCCGCCGCCACCACCTCGTCGTCGTCTTCTTCCTCGGCCTCGGCCGCGCCCGCGGCGGCGGGGGCGCCGCGCGTCTACCCGCTGCGGGACTTCCCGGGGAGGGAGGCGGCGGGGCTGGGCGGCGCGTTCCGGGACAACGTGCGGTGGCTGCTGAGGCAGTGGGGCGGCGCCTCCCCCGCCTCCCCCGCCGCCGGGGGTCCTGGGTCGGCGTCGGCGGCGGTGGCGGTGGCGTGGCGGGTGCTCCTCTCCGACGACCGCACCGGCGTCGTCGTCCCCATCTTCGCCGTCGAGGAGCCCGTCGCGTCCTCGCCCAAGCCGCTCTGCGATTACTGCCGCTGGGCGGGTTGGAGCCACCATTGGGTGTCAAAGCGGAAGTACCATTTCATTATTCCGGCGCCCGCTGACTGGGACCGCCAGCTTGCTGCTGATGTGATCCTTGGACGCACCGACCACCTCCTCCATGGCCTGATCCACAGCAATGGTTTTGGTCACCTTGTCATGCTCCGTGGTCGCGATGGCGGCTCCACTGCACTATCTGGCCGTGACATCATGGACATCTGGGATTGCCTCTGCTCCGCTCTTCGTGCCAGGGCTGTGTCTGTGGTGGACTTTTCCCAGAAACGCTCTCTGGATCTTCGTCTCCTGCTCAGCGTGGCACATGGTGACACATGGTTCACCCGATGGGGATACTGCCTTGCAAGGGGTTGCTTCTGTGTGTCTACCTCGACCTATGCAGCTTCCGTGGAAGCGTTGGCTGCCCTGCCTGTGGACTATCTTCGCAGCCGTCACGTCCGCCGTGTGGTAACCATTTACCGCCGCCTATCCAACAAACCTCTGGTTACAGTCCGTGAGTTCCTCCGCTGCCTCCTTGATTGGAAGCACCTTGAGCCACCCCTTCAATTACCTCCTGTGAAGACATGCACACGGCTGCAATTCATGCTGCCAAAGCCATCTGTGATGAAGAGACACAGGCAGCAGCCATGCCAGCGCTTTGAGGATGTGATTGACCTGCTCCAGTGTCGCTGGTCCAAGAAGCGGCTTCTTGATGCTGCAGAGGTTGTTGTTGACAGGCTGCTAGAGCATGGCAGCGGGGCAGAGATGACACGGCAGGCGGTGCGAGATGCTGCAAGGGGCGCCATTGGTGATACTGGTCTCCTTGACTTTGTCATCAAGTCCCTTGGTGATACCATTGTTGGCAACTATATTGTGCGACGTGTGCCTGATGCTGAAACACGTGTGCTTCACTTTAGCCTTGAGGAATATGAAGAGCCAACACCAGCACTGTTGGATGTTGAGGTAGAGTGCACACCATTGCCACCTGTGGTACGGTGGCCTAGCACAGTGGAAGTAGAGCGAGATCTGCGTGCTGTCTACCGAGCAATGGTCGAGGTGCGCAGTGAGGCAGCACAGGCTGTGCTGGACTGCAAGCACTGGGTGAAGTGGTGGGGCCTTGGGGATGAGTCCGATGACCAGCTGAGGTTTTTCGTTGAGTGGCAACCCCAGCCATGGGAAGCTGCTGAGCTTATACGGCCAATGCCACTGGGGGAGATTGTGGTGGTACCACTCCATGCATCCATGGGTGAGCTTCTTGTCGAGTCAGAGCATGCGCTGCGGGACACTTACTACTTCTTTGAGGAATTCCAGGCTGAAGGGCTGCATGGCATTGCTGGGGAGAAATGGGATCCAGTGATGCTTGGTGGGGCAGAGAATGGTGACACAATCAGCGTGTATGGCAATGGGGCAGACATGGAAACTGAGCTGCGGTGCCATGGTGGACTTGACTTGTGGGAGGTGCGGTGCGTGTGTGGTGCGCAGGATGATGATGGTGAGCGCATGATAGCATGCGATGCTTGCGATGTATGGCACCACACACGTTGCGTGGGCATTGCAGACAGCGAGCCTGTGCCACCATTATTTCTTTGTGTGCTCTGCGGTGGTGCGCTCATGGCGGCTGGACCGATCAATTCTTGA
Protein Sequence
  • >LOC_Os03g50780.1
    MPSMRALERLASWPTPPPPPPPPPPPAKAAAAEAERPCPPSSAATTSSSSSSSASAAPAAAGAPRVYPLRDFPGREAAGLGGAFRDNVRWLLRQWGGASPASPAAGGPGSASAAVAVAWRVLLSDDRTGVVVPIFAVEEPVASSPKPLCDYCRWAGWSHHWVSKRKYHFIIPAPADWDRQLAADVILGRTDHLLHGLIHSNGFGHLVMLRGRDGGSTALSGRDIMDIWDCLCSALRARAVSVVDFSQKRSLDLRLLLSVAHGDTWFTRWGYCLARGCFCVSTSTYAASVEALAALPVDYLRSRHVRRVVTIYRRLSNKPLVTVREFLRCLLDWKHLEPPLQLPPVKTCTRLQFMLPKPSVMKRHRQQPCQRFEDVIDLLQCRWSKKRLLDAAEVVVDRLLEHGSGAEMTRQAVRDAARGAIGDTGLLDFVIKSLGDTIVGNYIVRRVPDAETRVLHFSLEEYEEPTPALLDVEVECTPLPPVVRWPSTVEVERDLRAVYRAMVEVRSEAAQAVLDCKHWVKWWGLGDESDDQLRFFVEWQPQPWEAAELIRPMPLGEIVVVPLHASMGELLVESEHALRDTYYFFEEFQAEGLHGIAGEKWDPVMLGGAENGDTISVYGNGADMETELRCHGGLDLWEVRCVCGAQDDDGERMIACDACDVWHHTRCVGIADSEPVPPLFLCVLCGGALMAAGPINS*