Information report for PIBP1
Gene Details
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Functional Descriptions
- We find that PIBP1 and a homolog, Os06 g02240, bind DNA and function as unconventional transcription factors at the promoters of the defense genes OsWAK14 and OsPAL1, activating their expression.
- Here, we identify PIBP1 (PigmR-INTERACTING and BLAST RESISTANCE PROTEIN 1), an RRM (RNA-recognition motif) protein that specifically interacts with PigmR and other similar NLRs to trigger blast resistance.
- PigmR-promoted nuclear accumulation of PIBP1 ensures full blast resistance.
- Knockout of PIBP1 and Os06 g02240 greatly attenuated blast resistance.
Functional Keywords
Literature and News
Gene Resources
- UniProt: Q8W319
- EMBL: AP014959, DP000009
- AlphaFoldDB: Q8W319
- EnsemblPlants: Os03t0713600-01
- Gramene: Os03t0713600-01
- KEGG: osa:4333902
- Orthologous matrix: IEMRSET
- InterPro: IPR000504, IPR012677, IPR035979
- PANTHER: PTHR32343, PTHR32343:SF29
- SUPFAM: SSF54928
- PROSITE: PS50102
- Gene3D: 3.30.70.330
- OrthoDB: Q8W319
- SWISS-MODEL: Q8W319
- eggNOG: ENOG502QVG7
Sequences
cDNA Sequence
- >LOC_Os03g50560.1
CCGGCACGACCCCGTCGCGAGACCGAAAAAAAAAAACCACCGTGCCGTGGCCAGCAACCTACCTCCTCGGCTTCTCTCTCTCTCTCTCTCGGTCTCCCACCTCCTCATCCCGCTCGCCCGCTCGCCGACACGGCGCAAATCCAAGAACCCCCCACGCCGTGCGTGGACACCTCGCCTCGCCTCGTCCTCGCCCATCTCTCTCCTTTTGCCCGCATCCGCGGCCTCGCCTCGTAGTCCCCGCCGCATCTCGCCATTCCGCTACGCGCCCAAGCTACTGCTAGTAGTACTATCTGCTCCCCCGTGCGTGGTCGGGTCAGGTGGGTCGGCCGCGAGATCCCGCCATGGAGGTCAGGACAGTAAAAGTTAGCAACATTTCATTGAATGCTTCAAAAAGGGAGATCACAGAGTTCTTCTCTTTCTCTGGAGATATAGAATATGTTGAGATGCAAAGTGAATCTGAAAGGTCACAGCTTGCTTATGTTACATTTAAGGACTCACAAGGAGCAGATACTGCTGTGCTTCTCTCAGGGGCAACAATTGTTGACCGTTCTGTCATCATAACTCCAGTTGTGAACTATCAACTGCCTCCTGATGCACGCAAACAATCCGCAGGAGAGAAATCTTCCTCTGCTGAATCTGTAGTCAGGAAGGCAGAGGATGTTGTGAGCAGCATGTTGGCAAAGGGCTTTGTCCTCAGCAAGGATGCTCTGAACGTAGCAAGATCTTTTGACGAGCGTCACAACATACTGTCCAATGCTACAGCTACTGTCGCATCTCTAGACCGCCAGTATGGCGTGAGTGAAAAGATCAGTTTGGGCCGTGCAATTGTTGGTAGCAAGGTCAAGGAGGTGGATGATCGTTATCAGGTGTCAGAACTCACAAAGTCCGCTTTAGCGGCTGCGGAGCAGAAAGCCAGCATTGCAAGCTCTGCTATCATGAATAACCAGTATGTCTCAGCTGGTGCTTCCTGGTTAACAAGCGCATTTGGCATGGTAACCAAGGCGGCAGGTGACATGAGCTCCATGACCAAAGATAAGGTAGACAGGGCCGAAGAGGAGAGGAAAGCGATCATGTGGGAAGAGAGGAATGGGCTTGTAAGTGATTATGCCAAGATCCATCTTGATGAACCCTCTTCATGGGAGCCTGCAGTTCTTCCGTTGGAATCTGTGGATGAGCAGAAGCTCCAGGCTGTGTGATCTGCACAATCCAATGGTGGTCGTTTCTCTGCACGTCATTCTTTTGTTCATGTCCAATATAGAAGATTGTTTTTCACCGCTGCACGGTAGCAAAAATATTGAGCTTATTGCCTATAGTATGATGTAAATTTTAGAAATTCCCCATGTGTTTTCTTCCAGCTTTGTTATAGACCACTGAAAGGCTTACTTGTTCAGTGTTAGACATGGAAATGAAAGTTGTTCCAGACTTCCAGGCATACCTCTTGTTATGGTAGAACATGTTTCTGTGAGTTATCTCAGAACTATTTGTGCTCTGATATTCTGAAGCTACATGTGTAAGGCCCAAATCTGGGAAATAATCAAGGTCAAAATGAAATGCAGACAATATTTCCTAATCCTA - >LOC_Os03g50560.2
CCGGCACGACCCCGTCGCGAGACCGAAAAAAAAAAACCACCGTGCCGTGGCCAGCAACCTACCTCCTCGGCTTCTCTCTCTCTCTCTCTCGGTCTCCCACCTCCTCATCCCGCTCGCCCGCTCGCCGACACGGCGCAAATCCAAGAACCCCCCACGCCGTGCGTGGACACCTCGCCTCGCCTCGTCCTCGCCCATCTCTCTCCTTTTGCCCGCATCCGCGGCCTCGCCTCGTAGTCCCCGCCGCATCTCGCCATTCCGCTACGCGCCCAAGCTACTGCTAGTAGTACTATCTGCTCCCCCGTGCGTGGTCGGGTCAGGTGGGTCGGCCGCGAGATCCCGCCATGGAGGTCAGGACAGTAAAAGTTAGCAACATTTCATTGAATGCTTCAAAAAGGGAGATCACAGAGTTCTTCTCTTTCTCTGGAGATATAGAATATGTTGAGATGCAAAGTGAATCTGAAAGGTCACAGCTTGCTTATGTTACATTTAAGGACTCACAAGGAGCAGATACTGCTGTGCTTCTCTCAGGGGCAACAATTGTTGACCGTTCTGTCATCATAACTCCAGTTGTGAACTATCAACTGCCTCCTGATGCACGCAAACAATCCGCAGGAGAGAAATCTTCCTCTGCTGAATCTGTAGTCAGGAAGGCAGAGGATGTTGTGAGCAGCATGTTGGCAAAGGGCTTTGTCCTCAGCAAGGATGCTCTGAACGTAGCAAGATCTTTTGACGAGCGTCACAACATACTGTCCAATGCTACAGCTACTGTCGCATCTCTAGACCGCCAGTATGGCGTGAGTGAAAAGATCAGTTTGGGCCGTGCAATTGTTGGTAGCAAGGTCAAGGAGGTGGATGATCGTTATCAGGTGTCAGAACTCACAAAGTCCGCTTTAGCGGCTGCGGAGCAGAAAGCCAGCATTGCAAGCTCTGCTATCATGAATAACCAGTATGTCTCAGCTGGTGCTTCCTGGTTAACAAGCGCATTTGGCATGGTAACCAAGGCGGCAGGTGACATGAGCTCCATGACCAAAGATAAGGTAGACAGGGCCGAAGAGGAGAGGAAAGCGATCATGTGGGAAGAGAGGAATGGGCTTGTAAGTGATTATGCCAAGATCCATCTTGATGAACCCTCTTCATGGGAGCCTGCAGTTCTTCCGTTGGAATCTGTGGATGAGCAGAAGCTCCAGGCTGTGTGATCTGCACAATCCAATGGTGGTCGTTTCTCTGCACGTCATTCTTTTGTTCATGTCCAATATAGAAGATTGTTTTTCACCGCTGCACGGTAGCAAAAATATTGAGCTTATTGCCTATAGTATGATGTAAATTTTAGAAATTCCCCATGTGTTTTCTTCCAGCTTTGTTATAGACCACTGAAAGGCTTACTTGTTCAGTGTTAGACATGGAAATGAAAGTTGTTCCAGACTTCCAGGCATACCTCTTGTTATGGTAGAACATGTTTCTGTGAGTTATCTCAGAACTATTTGTGCTCTGATATTCTGAAGCTACATGTGTAAGGCCCAAATCTGGGAAATAATCAAGGTCAAAATGAAATGCAGACAATATTTCCTAATCCTA - >LOC_Os03g50560.3
CCGGCACGACCCCGTCGCGAGACCGAAAAAAAAAAACCACCGTGCCGTGGCCAGCAACCTACCTCCTCGGCTTCTCTCTCTCTCTCTCTCGGTCTCCCACCTCCTCATCCCGCTCGCCCGCTCGCCGACACGGCGCAAATCCAAGAACCCCCCACGCCGTGCGTGGACACCTCGCCTCGCCTCGTCCTCGCCCATCTCTCTCCTTTTGCCCGCATCCGCGGCCTCGCCTCGTAGTCCCCGCCGCATCTCGCCATTCCGCTACGCGCCCAAGCTACTGCTAGTAGTACTATCTGCTCCCCCGTGCGTGGTCGGGTCAGGTGGGTCGGCCGCGAGATCCCGCCATGGAGGTCAGGACAGTAAAAGTTAGCAACATTTCATTGAATGCTTCAAAAAGGGAGATCACAGAGTTCTTCTCTTTCTCTGGAGATATAGAATATGTTGAGATGCAAAGTGAATCTGAAAGGTCACAGCTTGCTTATGTTACATTTAAGGACTCACAAGGAGCAGATACTGCTGTGCTTCTCTCAGGGGCAACAATTGTTGACCGTTCTGTCATCATAACTCCAGTTGTGAACTATCAACTGCCTCCTGATGCACGCAAACAATCCGCAGGAGAGAAATCTTCCTCTGCTGAATCTGTAGTCAGGAAGGCAGAGGATGTTGTGAGCAGCATGTTGGCAAAGGGCTTTGTCCTCAGCAAGGATGCTCTGAACGTAGCAAGATCTTTTGACGAGCGTCACAACATACTGTCCAATGCTACAGCTACTGTCGCATCTCTAGACCGCCAGTATGGCGTGAGTGAAAAGATCAGTTTGGGCCGTGCAATTGTTGGTAGCAAGGTCAAGGAGGTGGATGATCGTTATCAGGTGTCAGAACTCACAAAGTCCGCTTTAGCGGCTGCGGAGCAGAAAGCCAGCATTGCAAGCTCTGCTATCATGAATAACCAGTATGTCTCAGCTGGTGCTTCCTGGTTAACAAGCGCATTTGGCATGGTAACCAAGGCGGCAGGTGACATGAGCTCCATGACCAAAGATAAGGTAGACAGGGCCGAAGAGGAGAGGAAAGCGATCATGTGGGAAGAGAGGAATGGGCTTGTAAGTGATTATGCCAAGATCCATCTTGATGAACCCTCTTCATGGGAGCCTGCAGTTCTTCCGTTGGAATCTGTGGATGAGCAGAAGCTCCAGGCTGTGTGATCTGCACAATCCAATGGTGGTCGTTTCTCTGCACGTCATTCTTTTGTTCATGTCCAATATAGAAGATTGTTTTTCACCGCTGCACGGTAGCAAAAATATTGAGCTTATTGCCTATAGTATGATGTAAATTTTAGAAATTCCCCATGTGTTTTCTTCCAGCTTTGTTATAGACCACTGAAAGGCTTACTTGTTCAGTGTTAGACATGGAAATGAAAGTTGTTCCAGACTTCCAGGCATACCTCTTGTTATGGTAGAACATGTTTCTGTGAGTTATCTCAGAACTATTTGTGCTCTGATATTCTGAAGCTACATGTGTAAGGCCCAAATCTGGGAAATAATCAAGGTCAAAATGAAATGCAGACAATATTTCCTAATCCTA
CDS Sequence
- >LOC_Os03g50560.1
ATGGAGGTCAGGACAGTAAAAGTTAGCAACATTTCATTGAATGCTTCAAAAAGGGAGATCACAGAGTTCTTCTCTTTCTCTGGAGATATAGAATATGTTGAGATGCAAAGTGAATCTGAAAGGTCACAGCTTGCTTATGTTACATTTAAGGACTCACAAGGAGCAGATACTGCTGTGCTTCTCTCAGGGGCAACAATTGTTGACCGTTCTGTCATCATAACTCCAGTTGTGAACTATCAACTGCCTCCTGATGCACGCAAACAATCCGCAGGAGAGAAATCTTCCTCTGCTGAATCTGTAGTCAGGAAGGCAGAGGATGTTGTGAGCAGCATGTTGGCAAAGGGCTTTGTCCTCAGCAAGGATGCTCTGAACGTAGCAAGATCTTTTGACGAGCGTCACAACATACTGTCCAATGCTACAGCTACTGTCGCATCTCTAGACCGCCAGTATGGCGTGAGTGAAAAGATCAGTTTGGGCCGTGCAATTGTTGGTAGCAAGGTCAAGGAGGTGGATGATCGTTATCAGGTGTCAGAACTCACAAAGTCCGCTTTAGCGGCTGCGGAGCAGAAAGCCAGCATTGCAAGCTCTGCTATCATGAATAACCAGTATGTCTCAGCTGGTGCTTCCTGGTTAACAAGCGCATTTGGCATGGTAACCAAGGCGGCAGGTGACATGAGCTCCATGACCAAAGATAAGGTAGACAGGGCCGAAGAGGAGAGGAAAGCGATCATGTGGGAAGAGAGGAATGGGCTTGTAAGTGATTATGCCAAGATCCATCTTGATGAACCCTCTTCATGGGAGCCTGCAGTTCTTCCGTTGGAATCTGTGGATGAGCAGAAGCTCCAGGCTGTGTGA - >LOC_Os03g50560.2
ATGGAGGTCAGGACAGTAAAAGTTAGCAACATTTCATTGAATGCTTCAAAAAGGGAGATCACAGAGTTCTTCTCTTTCTCTGGAGATATAGAATATGTTGAGATGCAAAGTGAATCTGAAAGGTCACAGCTTGCTTATGTTACATTTAAGGACTCACAAGGAGCAGATACTGCTGTGCTTCTCTCAGGGGCAACAATTGTTGACCGTTCTGTCATCATAACTCCAGTTGTGAACTATCAACTGCCTCCTGATGCACGCAAACAATCCGCAGGAGAGAAATCTTCCTCTGCTGAATCTGTAGTCAGGAAGGCAGAGGATGTTGTGAGCAGCATGTTGGCAAAGGGCTTTGTCCTCAGCAAGGATGCTCTGAACGTAGCAAGATCTTTTGACGAGCGTCACAACATACTGTCCAATGCTACAGCTACTGTCGCATCTCTAGACCGCCAGTATGGCGTGAGTGAAAAGATCAGTTTGGGCCGTGCAATTGTTGGTAGCAAGGTCAAGGAGGTGGATGATCGTTATCAGGTGTCAGAACTCACAAAGTCCGCTTTAGCGGCTGCGGAGCAGAAAGCCAGCATTGCAAGCTCTGCTATCATGAATAACCAGTATGTCTCAGCTGGTGCTTCCTGGTTAACAAGCGCATTTGGCATGGTAACCAAGGCGGCAGGTGACATGAGCTCCATGACCAAAGATAAGGTAGACAGGGCCGAAGAGGAGAGGAAAGCGATCATGTGGGAAGAGAGGAATGGGCTTGTAAGTGATTATGCCAAGATCCATCTTGATGAACCCTCTTCATGGGAGCCTGCAGTTCTTCCGTTGGAATCTGTGGATGAGCAGAAGCTCCAGGCTGTGTGA - >LOC_Os03g50560.3
ATGGAGGTCAGGACAGTAAAAGTTAGCAACATTTCATTGAATGCTTCAAAAAGGGAGATCACAGAGTTCTTCTCTTTCTCTGGAGATATAGAATATGTTGAGATGCAAAGTGAATCTGAAAGGTCACAGCTTGCTTATGTTACATTTAAGGACTCACAAGGAGCAGATACTGCTGTGCTTCTCTCAGGGGCAACAATTGTTGACCGTTCTGTCATCATAACTCCAGTTGTGAACTATCAACTGCCTCCTGATGCACGCAAACAATCCGCAGGAGAGAAATCTTCCTCTGCTGAATCTGTAGTCAGGAAGGCAGAGGATGTTGTGAGCAGCATGTTGGCAAAGGGCTTTGTCCTCAGCAAGGATGCTCTGAACGTAGCAAGATCTTTTGACGAGCGTCACAACATACTGTCCAATGCTACAGCTACTGTCGCATCTCTAGACCGCCAGTATGGCGTGAGTGAAAAGATCAGTTTGGGCCGTGCAATTGTTGGTAGCAAGGTCAAGGAGGTGGATGATCGTTATCAGGTGTCAGAACTCACAAAGTCCGCTTTAGCGGCTGCGGAGCAGAAAGCCAGCATTGCAAGCTCTGCTATCATGAATAACCAGTATGTCTCAGCTGGTGCTTCCTGGTTAACAAGCGCATTTGGCATGGTAACCAAGGCGGCAGGTGACATGAGCTCCATGACCAAAGATAAGGTAGACAGGGCCGAAGAGGAGAGGAAAGCGATCATGTGGGAAGAGAGGAATGGGCTTGTAAGTGATTATGCCAAGATCCATCTTGATGAACCCTCTTCATGGGAGCCTGCAGTTCTTCCGTTGGAATCTGTGGATGAGCAGAAGCTCCAGGCTGTGTGA
Protein Sequence
- >LOC_Os03g50560.1
MEVRTVKVSNISLNASKREITEFFSFSGDIEYVEMQSESERSQLAYVTFKDSQGADTAVLLSGATIVDRSVIITPVVNYQLPPDARKQSAGEKSSSAESVVRKAEDVVSSMLAKGFVLSKDALNVARSFDERHNILSNATATVASLDRQYGVSEKISLGRAIVGSKVKEVDDRYQVSELTKSALAAAEQKASIASSAIMNNQYVSAGASWLTSAFGMVTKAAGDMSSMTKDKVDRAEEERKAIMWEERNGLVSDYAKIHLDEPSSWEPAVLPLESVDEQKLQAV* - >LOC_Os03g50560.2
MEVRTVKVSNISLNASKREITEFFSFSGDIEYVEMQSESERSQLAYVTFKDSQGADTAVLLSGATIVDRSVIITPVVNYQLPPDARKQSAGEKSSSAESVVRKAEDVVSSMLAKGFVLSKDALNVARSFDERHNILSNATATVASLDRQYGVSEKISLGRAIVGSKVKEVDDRYQVSELTKSALAAAEQKASIASSAIMNNQYVSAGASWLTSAFGMVTKAAGDMSSMTKDKVDRAEEERKAIMWEERNGLVSDYAKIHLDEPSSWEPAVLPLESVDEQKLQAV* - >LOC_Os03g50560.3
MEVRTVKVSNISLNASKREITEFFSFSGDIEYVEMQSESERSQLAYVTFKDSQGADTAVLLSGATIVDRSVIITPVVNYQLPPDARKQSAGEKSSSAESVVRKAEDVVSSMLAKGFVLSKDALNVARSFDERHNILSNATATVASLDRQYGVSEKISLGRAIVGSKVKEVDDRYQVSELTKSALAAAEQKASIASSAIMNNQYVSAGASWLTSAFGMVTKAAGDMSSMTKDKVDRAEEERKAIMWEERNGLVSDYAKIHLDEPSSWEPAVLPLESVDEQKLQAV*