Information report for OsRHC1;LE
Gene Details
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Functional Descriptions
- tomato DC3000, suggesting that OsRHC1 may confer broad-spectrum disease resistance.
- Using map-based cloning, we mapped the LE gene to the short arm of chromosome 3.
- The LE encodes a C3HC4-type RING finger protein and was expressed to relatively high LEvels in seeds at a late developmental stage.
- A genetic moduLE at one locus in rice protects chloroplasts to enhance thermotoLErance.
- SMG3 interacts with another grain size regulator, DGS1.
- DGS1 ubiquitinates the BR receptor BRASSINOSTEROID INSENSITIVE 1 (BRI1) and affects its accumulation.
- SMG3 and DGS1 are involved in BR signaling.
- Further analyses showed that DGS1 is an active E3 ubiquitin ligase and colocates with SMG3 in the ER.
Functional Keywords
Literature and News
- Expression of a RING-HC protein from rice improves resistance to Pseudomonas syringae pv. tomato DC3000 in transgenic Arabidopsis thaliana . DOI: 10.1093/jxb/erm272 ; PMID: 18182423
- Identification and Characterization of LARGE EMBRYO, a New Gene Controlling Embryo Size in Rice (Oryza sativa L.) . DOI: 10.1186/s12284-019-0277-y ; PMID: 30972509
- A genetic module at one locus in rice protects chloroplasts to enhance thermotolerance . DOI: 10.1126/science.abo5721 ; PMID: 35709289
- An endoplasmic reticulum-associated degradation-related E2-E3 enzyme pair controls grain size and weight through the brassinosteroid signaling pathway in rice . DOI: 10.1093/plcell/koac364 ; PMID: 36519262
Gene Resources
- UniProt: Q10E70
- EMBL: AK065293, AP014959, DP000009
- AlphaFoldDB: Q10E70
- EnsemblPlants: Os03t0706900-01
- Gramene: Os03t0706900-01
- KEGG: osa:4333857
- Orthologous matrix: SWWIIFF
- InterPro: IPR001841, IPR013083, IPR019396
- PANTHER: PTHR46859, PTHR46859:SF6
- SUPFAM: SSF57850
- PROSITE: PS50089
- Gene3D: 3.30.40.10
- OrthoDB: Q10E70
- SWISS-MODEL: Q10E70
- eggNOG: KOG1100
Sequences
cDNA Sequence
- >LOC_Os03g49900.1
TCTCCAGCCAAAAGACTAAAGAAAAGGGCTAGAGTCTAAGAGGGGAGAGAGAGAGAGAGAGAGAGAGGAAGGAACCCTTCGTCCTCGTCGCCTCACTTTTGTCTCCCACTCCTTCGTCGGCGGCTCGGCTCGGCGCAGGCGCAGCGGGGAGAAGACCAAGGAGGAGGGAGAGGCGGACGCGGGAGCGGAAGAGATTAATTTCCAGTGGGGTTTGGGGCGCGGTGAGGAGGTGAGGGATGCAGCGGCGGCGGGCGCAGACGTGGGCGGGGGTGGGGAAGACGGCGCAGGCGGCGGCGGCGCACGCGGCGCTCTTCTGCTTCACGCTCCTCCTCGCGCTCAAAGTCGACGGCCGCACAGCCTACTCCTGGTGGATTATATTCATCCCTCTATGGCTATTTCATGGCATTGTTGCCCGTGGAAGGTTTTCAATGCCAGCCCCTTCGCTTCCTCATGGCCGTCATTGGGCTCCTTGCCATTCAATTGTTGCAGCGCCGTTGCTTATTGCGTTTGAGCTGCTGCTTTGCATATATCTCGAAAGTTTGAGAGTTAAAAGTAAGCCGACTGTTGATTTGAAGATTGTATTCCTTCCTCTTCTGGCCTTTGAAGTGATTATTCTTGCTGACAATTTCAGAATGTGTAGAGCTTTAATGCCAGGAGATGAAGAAAGTATGAGCGATGAAGCTATTTGGGAGACACTTCCTCACTTTTGGGTTGCAATTTCTATGGTGTTTCTTATAGCTGCTACAACCTTCACACTTTTGAAGCTGTCTGGTGATGTTGGTGCTTTGGGATGGTGGGATTTGTTTATAAATTATGGAATCGCGGAGTGTTTTGCATTTCTTGTTTGTACTAGATGGTTTAATCCCATGATTCATAAATCTCCTAATCCTGGGGAGGCTAGCTCATCATCAGCGGCAATTAGATACCGTGATTGGGAGAGTGGTCTTCTCCTCCCATCACTAGAAGATCATGAACAAGAGAGGCTCTGTGGTCTTCCTGACATAGGAGGTCACGTAATGAAAATACCACTGGTGATTTTCCAAGTTTTGCTTTGTATGCGCTTGGAGGGTACGCCTCCTAGTGCTCAGTATATTCCGATATTTGCACTGTTCTCCCCACTGTTTATTTTACAAGGCGCTGGTGTCCTTTTCTCTCTAGCAAGATTGTTGGAGAAGGTTGTTCTACTATTACGAAATGGACCAGTTAGTCCTAATTACCTTACAATCTCATCAAAAGTCCGTGATTGCTTTGCTTTTCTTCATCGTGGTTCAAGGCTTCTTGGTTGGTGGTCTATTGATGAAGGCAGCAAAGAAGAGCAAGCCCGGTTATTCTATACTGAATCTACTGGGTACAACACATTTTGTGGCTATCCACCTGAGGTAGTCAGGAAAATGCCTAAGAGGGATCTTGCAGAAGAGGTATGGAGGCTCCAAGCAGCTTTGGGAGAGCAATCAGAAATTACCAAATGTACCAAGCAGGAATTTGAAAGGCTTCAAAATGAGAAGGTTCTTTGTAGGATTTGCTACGAGGGGGAGATATGCATGGTCTTACTTCCTTGCCGGCACAGAACATTATGCAAGACTTGTTCTGATAAGTGCAAGAAATGTCCAATCTGCCGTGTGCCCATTGAAGAACGCATGCCCGTATATGATGTTTAAACTTCGCTAACTCAGATGAACGTTACAAATTTGTACATGTTGGTTGTGCAATGTCGCGCCATGTAGTCTCAATCACAACTTTAAGCTGATTGAGGTTTGCACAAGTTCAGAAAGGTTTACCGAATATGGAGAAAATATAAAGCATATCATGTCTAACCAAAAGCATGAAAAGGTAGTTGATGATCATTTTGCCGGTTACAATTATGTACTGTAAGTATGTCATCGGTGGTTTTAACTTTTTTTTTTGGTGATCGATAGATGCTCCAGTTAGATTGTGTAGCATCTTCTCAAGTTTATGCATTGTCTGAATGTAAATAAGAATATTGTCTTGTTTGAGTGTTGTAGTGCTCTTTGGTTGAGAAGAGTAGAAAAGAAAAATGTAAATCTCCCTCCCCATGTTTACCCGGTTAGCC
CDS Sequence
- >LOC_Os03g49900.1
ATGCAGCGGCGGCGGGCGCAGACGTGGGCGGGGGTGGGGAAGACGGCGCAGGCGGCGGCGGCGCACGCGGCGCTCTTCTGCTTCACGCTCCTCCTCGCGCTCAAAGTCGACGGCCGCACAGCCTACTCCTGGTGGATTATATTCATCCCTCTATGGCTATTTCATGGCATTGTTGCCCGTGGAAGGTTTTCAATGCCAGCCCCTTCGCTTCCTCATGGCCGTCATTGGGCTCCTTGCCATTCAATTGTTGCAGCGCCGTTGCTTATTGCGTTTGAGCTGCTGCTTTGCATATATCTCGAAAGTTTGAGAGTTAAAAGTAAGCCGACTGTTGATTTGAAGATTGTATTCCTTCCTCTTCTGGCCTTTGAAGTGATTATTCTTGCTGACAATTTCAGAATGTGTAGAGCTTTAATGCCAGGAGATGAAGAAAGTATGAGCGATGAAGCTATTTGGGAGACACTTCCTCACTTTTGGGTTGCAATTTCTATGGTGTTTCTTATAGCTGCTACAACCTTCACACTTTTGAAGCTGTCTGGTGATGTTGGTGCTTTGGGATGGTGGGATTTGTTTATAAATTATGGAATCGCGGAGTGTTTTGCATTTCTTGTTTGTACTAGATGGTTTAATCCCATGATTCATAAATCTCCTAATCCTGGGGAGGCTAGCTCATCATCAGCGGCAATTAGATACCGTGATTGGGAGAGTGGTCTTCTCCTCCCATCACTAGAAGATCATGAACAAGAGAGGCTCTGTGGTCTTCCTGACATAGGAGGTCACGTAATGAAAATACCACTGGTGATTTTCCAAGTTTTGCTTTGTATGCGCTTGGAGGGTACGCCTCCTAGTGCTCAGTATATTCCGATATTTGCACTGTTCTCCCCACTGTTTATTTTACAAGGCGCTGGTGTCCTTTTCTCTCTAGCAAGATTGTTGGAGAAGGTTGTTCTACTATTACGAAATGGACCAGTTAGTCCTAATTACCTTACAATCTCATCAAAAGTCCGTGATTGCTTTGCTTTTCTTCATCGTGGTTCAAGGCTTCTTGGTTGGTGGTCTATTGATGAAGGCAGCAAAGAAGAGCAAGCCCGGTTATTCTATACTGAATCTACTGGGTACAACACATTTTGTGGCTATCCACCTGAGGTAGTCAGGAAAATGCCTAAGAGGGATCTTGCAGAAGAGGTATGGAGGCTCCAAGCAGCTTTGGGAGAGCAATCAGAAATTACCAAATGTACCAAGCAGGAATTTGAAAGGCTTCAAAATGAGAAGGTTCTTTGTAGGATTTGCTACGAGGGGGAGATATGCATGGTCTTACTTCCTTGCCGGCACAGAACATTATGCAAGACTTGTTCTGATAAGTGCAAGAAATGTCCAATCTGCCGTGTGCCCATTGAAGAACGCATGCCCGTATATGATGTTTAA
Protein Sequence
- >LOC_Os03g49900.1
MQRRRAQTWAGVGKTAQAAAAHAALFCFTLLLALKVDGRTAYSWWIIFIPLWLFHGIVARGRFSMPAPSLPHGRHWAPCHSIVAAPLLIAFELLLCIYLESLRVKSKPTVDLKIVFLPLLAFEVIILADNFRMCRALMPGDEESMSDEAIWETLPHFWVAISMVFLIAATTFTLLKLSGDVGALGWWDLFINYGIAECFAFLVCTRWFNPMIHKSPNPGEASSSSAAIRYRDWESGLLLPSLEDHEQERLCGLPDIGGHVMKIPLVIFQVLLCMRLEGTPPSAQYIPIFALFSPLFILQGAGVLFSLARLLEKVVLLLRNGPVSPNYLTISSKVRDCFAFLHRGSRLLGWWSIDEGSKEEQARLFYTESTGYNTFCGYPPEVVRKMPKRDLAEEVWRLQAALGEQSEITKCTKQEFERLQNEKVLCRICYEGEICMVLLPCRHRTLCKTCSDKCKKCPICRVPIEERMPVYDV*