Information report for FLO6
Gene Details
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Functional Descriptions
- Here, we report the cloning and characterization of the FLOURY ENDOSPERM6 (FLO6) gene in rice.
- Significantly, FLO6 mutant endosperm cells show obvious defects in compound granule formation.
- We thus propose that FLO6 may act as a starch-binding protein involved in starch synthesis and compound granule formation through a direct interaction with ISA1 in developing rice seeds.
- In the FLO6 mutant, the starch content is decreased and the normal physicochemical features of starch are changed.
- Furthermore, FLO6 can interact with isoamylase1 (ISA1) both in vitro and in vivo, whereas ISA1 does not bind to starch directly.
Literature and News
Gene Resources
- UniProt: Q10F03
- EMBL: AC092779, AK287681, AP008209
- AlphaFoldDB: Q10F03
- EnsemblPlants: Os03t0686900-01
- Gramene: Os03t0686900-01
- KEGG: dosa:Os03g0686900
- Orthologous matrix: RRCKDWD
- InterPro: IPR013783, IPR014756, IPR032640
- PANTHER: PTHR47434, PTHR47434:SF1
- SUPFAM: SSF81296
- Gene3D: 2.60.40.10
- OrthoDB: Q10F03
- Conserved Domain Database: cd02859
- eggNOG: KOG1616
Sequences
cDNA Sequence
- >LOC_Os03g48170.1
GCCCAACCCATCGCGTTTCCCCCCCCGCGGAGAAGCAGCACCGAAATGCGACCGCGATGCTCCCCCTCCTCCTCCCCCTCCCCGTGACCCCTCCTCCTCCTCTCCCCTCCCCAACCCTAACCCTAGCCCCCGCCTCCGCTCCTCGCCGACGCCTCGTCCTCCTCGCCGCCGCGGCGCCGCACCACCACCATCACCACCGCCGCCGCCGCGTCTACCGTCGCCAGCGCGCGGCGCCGACGCAGACGCGGGCGCCGAGGAGGACGTTGTCGGCGTCCAATGCGGCCCGCGGGGAGGAGGACCTCGAGGAGGCGATCTACGAGTTCATGCGGCGGTCCGACAAGCCGGGGGCGTTCCCCACCCGCGCCGAGCTCGTCGCCGCGGGGAGGGCCGACCTCGCCGCCGCCGTGGACGCCTGCGGCGGCTGGCTCTCGCTCGGGTGGTCCTCCGGTGGCGCGGAGGCAGGCAGGGCCTCCTCGTCGGTCGGCGTGCACCCTGACTACCCTCCCGAGGCGGGGGCGGCGGCGGCGGCGGGGGGCGCCTCCGACCTAGCGCAGGGAGCCGTGTGGGCGTCGTCCAGGGAGGCGGAAGCTTCGCCGTCCGGGCGCCAGCCGGAGACGGAGGAGGAGGAGACGGAGACGAAATTTGGGACTGGGTTGGACGGGATGCTTACCAGGCTGCAGAGGGAAAGGGAGAGGGTCCGGCCGCCGCTCCCACGGAGCAGCGATGGAGCGGGAGGGGAACGCGACAATGTTGCTTTAATGGGTCAGAGTGGAGCACCCAGTCACTCTGCAACTGGTGGCAGGTACACTCCAAAGGTACCTGATAATGGAAATATACATAGTTATCATCCTCAAAATGGAGCACTAGAACATAACAAAAGCTCAAAGAGTTTGACTAATGATGCATGGCGAACATGGTCCCTTGACAAGGGTGGTTTTTCAGATTTTCAAGCTGCTGAAATCCATTCAACTAACAGCAGGAAATCATTTAGACATGATGGCCTAGACATTCTTGCACAAGATGACGTGCACGGGCCATCTAATGGTGTGGCTGTACATGATTATGATATTAATGATGTAGACTCTGAAAGAGACGATATACATGCACGCCTTCAAAATTTGGAGTTGGATCTTACTGCCGCTCTTCATACATTAAGATCAAGATTCGACAAGGTTATATCAGATATGTCCGAAGGTGACGGAGCAAAAGCACCAAATGGGCTCTCCGACGATTGGGAATTTGAAGAGACCAAAGTAATGCAAGCTCAGGAAGAGCTGCGGTCAATCCGTGCAAAAATAGCAGTATTAGAAGGAAAGATGGCACTGGAGATAATTGAGAAGAACAAAATAATTGAAGAGAAACAAAGAAGGCTTGATGAAGCTGAGAAGGCCTTGAGTGAGCTCCGTACTGTTTATATTGTGTGGTCTAATCCTGCTTCAGAGGTTCTATTGACTGGATCTTTTGATGGCTGGACAAGCCAGAGAAGAATGGAAAGATCAGAAAGAGGCACCTTTTCCTTAAACCTGAGGTTGTATCCTGGTAGATATGAGATTAAATTTATTGTTGATGGTGTTTGGAGGAATGATCCTCTGCGCCCCCTTGTGAGCAATAACGGGCATGAAAACAACCTTCTGACTGTCACTTGACTTGAAGCTCCATTTGTCAATCCTGGTAGCATTTTTGTAGATTGTTATCTAGATCTTTATCAACATGATTAGGCCAATCCATCCAGAATGGAAACAAAAAAAATGAGTGAGCTGGTTAGCTCTGTTCCACCCTGTAATTATCTGCTTCGCCTTAAGTCGTCGTTCTTTTTCTTTGGTAGAGATTCTTACAATTTAAACAGTGTAAGGGTGTTGTCAGAATGCCTCACCCTGTTAGATAGGAGAAGAGAATAGTTGTGTATTCTTTTCTTCCCCGTCTTTTGCCCGGAGAAGTATAGTTGTGTGATGGGTATCCAGGTGTCTGGTTGTACACCTTCATGGAATGTGGTTGTACATCTCTTTTGTGGTGACAAAAACTCCCCCCGCCGGTAACTTTGCACTTGCAGAAGCTTTAGGTTTTAAA
CDS Sequence
- >LOC_Os03g48170.1
ATGCTCCCCCTCCTCCTCCCCCTCCCCGTGACCCCTCCTCCTCCTCTCCCCTCCCCAACCCTAACCCTAGCCCCCGCCTCCGCTCCTCGCCGACGCCTCGTCCTCCTCGCCGCCGCGGCGCCGCACCACCACCATCACCACCGCCGCCGCCGCGTCTACCGTCGCCAGCGCGCGGCGCCGACGCAGACGCGGGCGCCGAGGAGGACGTTGTCGGCGTCCAATGCGGCCCGCGGGGAGGAGGACCTCGAGGAGGCGATCTACGAGTTCATGCGGCGGTCCGACAAGCCGGGGGCGTTCCCCACCCGCGCCGAGCTCGTCGCCGCGGGGAGGGCCGACCTCGCCGCCGCCGTGGACGCCTGCGGCGGCTGGCTCTCGCTCGGGTGGTCCTCCGGTGGCGCGGAGGCAGGCAGGGCCTCCTCGTCGGTCGGCGTGCACCCTGACTACCCTCCCGAGGCGGGGGCGGCGGCGGCGGCGGGGGGCGCCTCCGACCTAGCGCAGGGAGCCGTGTGGGCGTCGTCCAGGGAGGCGGAAGCTTCGCCGTCCGGGCGCCAGCCGGAGACGGAGGAGGAGGAGACGGAGACGAAATTTGGGACTGGGTTGGACGGGATGCTTACCAGGCTGCAGAGGGAAAGGGAGAGGGTCCGGCCGCCGCTCCCACGGAGCAGCGATGGAGCGGGAGGGGAACGCGACAATGTTGCTTTAATGGGTCAGAGTGGAGCACCCAGTCACTCTGCAACTGGTGGCAGGTACACTCCAAAGGTACCTGATAATGGAAATATACATAGTTATCATCCTCAAAATGGAGCACTAGAACATAACAAAAGCTCAAAGAGTTTGACTAATGATGCATGGCGAACATGGTCCCTTGACAAGGGTGGTTTTTCAGATTTTCAAGCTGCTGAAATCCATTCAACTAACAGCAGGAAATCATTTAGACATGATGGCCTAGACATTCTTGCACAAGATGACGTGCACGGGCCATCTAATGGTGTGGCTGTACATGATTATGATATTAATGATGTAGACTCTGAAAGAGACGATATACATGCACGCCTTCAAAATTTGGAGTTGGATCTTACTGCCGCTCTTCATACATTAAGATCAAGATTCGACAAGGTTATATCAGATATGTCCGAAGGTGACGGAGCAAAAGCACCAAATGGGCTCTCCGACGATTGGGAATTTGAAGAGACCAAAGTAATGCAAGCTCAGGAAGAGCTGCGGTCAATCCGTGCAAAAATAGCAGTATTAGAAGGAAAGATGGCACTGGAGATAATTGAGAAGAACAAAATAATTGAAGAGAAACAAAGAAGGCTTGATGAAGCTGAGAAGGCCTTGAGTGAGCTCCGTACTGTTTATATTGTGTGGTCTAATCCTGCTTCAGAGGTTCTATTGACTGGATCTTTTGATGGCTGGACAAGCCAGAGAAGAATGGAAAGATCAGAAAGAGGCACCTTTTCCTTAAACCTGAGGTTGTATCCTGGTAGATATGAGATTAAATTTATTGTTGATGGTGTTTGGAGGAATGATCCTCTGCGCCCCCTTGTGAGCAATAACGGGCATGAAAACAACCTTCTGACTGTCACTTGA
Protein Sequence
- >LOC_Os03g48170.1
MLPLLLPLPVTPPPPLPSPTLTLAPASAPRRRLVLLAAAAPHHHHHHRRRRVYRRQRAAPTQTRAPRRTLSASNAARGEEDLEEAIYEFMRRSDKPGAFPTRAELVAAGRADLAAAVDACGGWLSLGWSSGGAEAGRASSSVGVHPDYPPEAGAAAAAGGASDLAQGAVWASSREAEASPSGRQPETEEEETETKFGTGLDGMLTRLQRERERVRPPLPRSSDGAGGERDNVALMGQSGAPSHSATGGRYTPKVPDNGNIHSYHPQNGALEHNKSSKSLTNDAWRTWSLDKGGFSDFQAAEIHSTNSRKSFRHDGLDILAQDDVHGPSNGVAVHDYDINDVDSERDDIHARLQNLELDLTAALHTLRSRFDKVISDMSEGDGAKAPNGLSDDWEFEETKVMQAQEELRSIRAKIAVLEGKMALEIIEKNKIIEEKQRRLDEAEKALSELRTVYIVWSNPASEVLLTGSFDGWTSQRRMERSERGTFSLNLRLYPGRYEIKFIVDGVWRNDPLRPLVSNNGHENNLLTVT*