Information report for OsFdC2
Gene Details
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Functional Descriptions
- OsFdC2 was expressed most abundantly in leaves and its encoded protein was targeted to the chloroplast.
- Map-based cloning of this mutant resulted in identification of OsFdC2 gene (LOC_Os03g48040) showing high identity with Arabidopsis FdC2 gene (AT1G32550).
- Mutation of FdC2 gene encoding a ferredoxin-like protein with C-terminal extension causes yellow-green leaf phenotype in rice.
- Our results suggest that OsFdC2 plays an important role in photosynthetic rate and development of heading date by regulating electron transfer and chlorophyll content in rice.
Functional Keywords
Literature and News
- Mutation of FdC2 gene encoding a ferredoxin-like protein with C-terminal extension causes yellow-green leaf phenotype in rice . DOI: 10.1016/j.plantsci.2015.06.010 ; PMID: 26259181
- Functional Inactivation of Putative Photosynthetic Electron Acceptor Ferredoxin C2 (FdC2) Induces Delayed Heading Date and Decreased Photosynthetic Rate in Rice . DOI: 10.1371/journal.pone.0143361 ; PMID: 26598971
Gene Resources
- UniProt: Q10F16
- EMBL: AK059896, AK098989, AK099303
- AlphaFoldDB: Q10F16
- EnsemblPlants: Os03t0685000-01
- Gramene: Os03t0685000-01
- KEGG: osa:4333746
- Orthologous matrix: NCLLARW
- InterPro: IPR001041, IPR010241, IPR012675
- PANTHER: PTHR43112, PTHR43112:SF10
- SUPFAM: SSF54292
- PROSITE: PS51085
- Gene3D: 3.10.20.30
- OrthoDB: Q10F16
- SWISS-MODEL: Q10F16
- Conserved Domain Database: cd00207
- eggNOG: ENOG502RXRY
Sequences
cDNA Sequence
- >LOC_Os03g48040.1
TCGTGATTTCCCCCTTCCGCTCGCTCGCGCCGCTCCCTACCGGCCACCACCGCGCGCGGGACAAGCAACCTAGCTGCTCCGGCTGCCAAGCCATCGCCATGGCTCCGTGCCCCGCCGCGACCACAACTCGCATTGGGGCGCCGCCGTTCGCCGCGACGACGGCTCGCCGACCCGCCCGGGGCGCGACGACGACGACGAAGGCGCGGGCGTCCGGGCTGCGGCAGGTGGAGGGCCCCGTGTCGGAGAGGGCGTACTCGTCCTCCTCGCCCGCTCCCACCCACAAGGTCACCGTCCACGACCGCCAGAGAGGTGTCGTCCACGAGTTCGTCGTCCCACAGGACCAGTACATTCTGCACACCGCGGAGGCGCAGGACATCACGCTGCCCTTCGCGTGCCGCCATGGTTGCTGTACTAGCTGTGCGGTTCGGATAAAGTCAGGACAAATAAGACAACCTGAAGCACTTGGAATATCTGCTGAACTAAAAGATAAGGGCTATGCATTGTTGTGTGTTGGTTTTCCAACTTCTGATGTTGAAGTTGAAACACAAGATGAAGATGAGGTCTACTGGCTCCAGTTTGGAAGATATTTCGCACGAGGACCTGTTGAAAGGGATGATTATGCACTGGAGCTTGCAATGGGTGATGAGTGAGCCGTGTCTAAAGAGTGGTGTTTGCAGTCGGGAGCTCATGTTGTCTTAAGGACTTTCTTTGAAAGTGGAGAAAGGGGCTTTTTCCTCAGCTCACAATTTTCCATCTTCAGTGCTGTTACTCTGTTAGCGATTGTTTGGCATGTAAAAAAGTGTGCTTTCTTGTAAAAATACCATTTTCTAGTTCGCACCTGACAGACGAAGAACACCATGGATTACATGTAAAGTTGTAAACTGAACACCTAATCTTGAGTGCGAATAATGAATAATGATCACCGGAGTTATGAGTTTGGGAATGATATGCTGCCATGAAAACCTTGAATTGAGTGAA - >LOC_Os03g48040.2
TCGTGATTTCCCCCTTCCGCTCGCTCGCGCCGCTCCCTACCGGCCACCACCGCGCGCGGGACAAGCAACCTAGCTGCTCCGGCTGCCAAGCCATCGCCATGGCTCCGTGCCCCGCCGCGACCACAACTCGCATTGGGGCGCCGCCGTTCGCCGCGACGACGGCTCGCCGACCCGCCCGGGGCGCGACGACGACGACGAAGGCGCGGGCGTCCGGGCTGCGGCAGGTGGAGGGCCCCGTGTCGGAGAGGGCGTACTCGTCCTCCTCGCCCGCTCCCACCCACAAGGTCACCGTCCACGACCGCCAGAGAGGTGTCGTCCACGAGTTCGTCGTCCCACAGGACCAGTACATTCTGCACACCGCGGAGGCGCAGGACATCACGCTGCCCTTCGCGTGCCGCCATGGTTGCTGTACTAGCTGTGCGGTTCGGATAAAGTCAGGACAAATAAGACAACCTGAAGCACTTGGAATATCTGCTGAACTAAAAGATAAGGGCTATGCATTGTTGTGTGTTGGTTTTCCAACTTCTGATGTTGAAGTTGAAACACAAGATGAAGATGAGGTCTACTGGCTCCAGTTTGGAAGATATTTCGCACGAGGACCTGTTGAAAGGGATGATTATGCACTGGAGCTTGCAATGGGTGATGAGTGAGCCGTGTCTAAAGAGTGGTGTTTGCAGTCGGGAGCTCATGTTGTCTTAAGGACTTTCTTTGAAAGTGGAGAAAGGGGCTTTTTCCTCAGCTCACAATTTTCCATCTTCAGTGCTGTTACTCTGTTAGCGATTGTTTGGCATGTAAAAAAGTGTGCTTTCTTGTAAAAATACCATTTTCTAGTTCGCACCTGACAGACGAAGAACACCATGGATTACATGTAAAGTTGTAAACTGAACACCTAATCTTGAGTGCGAATAATGAATAATGATCACCGGAGTTATGAGTTTGGGAATGATATGCTGCCATGAAAACCTTGAATTGAGTGAA
CDS Sequence
- >LOC_Os03g48040.1
ATGGCTCCGTGCCCCGCCGCGACCACAACTCGCATTGGGGCGCCGCCGTTCGCCGCGACGACGGCTCGCCGACCCGCCCGGGGCGCGACGACGACGACGAAGGCGCGGGCGTCCGGGCTGCGGCAGGTGGAGGGCCCCGTGTCGGAGAGGGCGTACTCGTCCTCCTCGCCCGCTCCCACCCACAAGGTCACCGTCCACGACCGCCAGAGAGGTGTCGTCCACGAGTTCGTCGTCCCACAGGACCAGTACATTCTGCACACCGCGGAGGCGCAGGACATCACGCTGCCCTTCGCGTGCCGCCATGGTTGCTGTACTAGCTGTGCGGTTCGGATAAAGTCAGGACAAATAAGACAACCTGAAGCACTTGGAATATCTGCTGAACTAAAAGATAAGGGCTATGCATTGTTGTGTGTTGGTTTTCCAACTTCTGATGTTGAAGTTGAAACACAAGATGAAGATGAGGTCTACTGGCTCCAGTTTGGAAGATATTTCGCACGAGGACCTGTTGAAAGGGATGATTATGCACTGGAGCTTGCAATGGGTGATGAGTGA - >LOC_Os03g48040.2
ATGGCTCCGTGCCCCGCCGCGACCACAACTCGCATTGGGGCGCCGCCGTTCGCCGCGACGACGGCTCGCCGACCCGCCCGGGGCGCGACGACGACGACGAAGGCGCGGGCGTCCGGGCTGCGGCAGGTGGAGGGCCCCGTGTCGGAGAGGGCGTACTCGTCCTCCTCGCCCGCTCCCACCCACAAGGTCACCGTCCACGACCGCCAGAGAGGTGTCGTCCACGAGTTCGTCGTCCCACAGGACCAGTACATTCTGCACACCGCGGAGGCGCAGGACATCACGCTGCCCTTCGCGTGCCGCCATGGTTGCTGTACTAGCTGTGCGGTTCGGATAAAGTCAGGACAAATAAGACAACCTGAAGCACTTGGAATATCTGCTGAACTAAAAGATAAGGGCTATGCATTGTTGTGTGTTGGTTTTCCAACTTCTGATGTTGAAGTTGAAACACAAGATGAAGATGAGGTCTACTGGCTCCAGTTTGGAAGATATTTCGCACGAGGACCTGTTGAAAGGGATGATTATGCACTGGAGCTTGCAATGGGTGATGAGTGA
Protein Sequence
- >LOC_Os03g48040.1
MAPCPAATTTRIGAPPFAATTARRPARGATTTTKARASGLRQVEGPVSERAYSSSSPAPTHKVTVHDRQRGVVHEFVVPQDQYILHTAEAQDITLPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKDKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPVERDDYALELAMGDE* - >LOC_Os03g48040.2
MAPCPAATTTRIGAPPFAATTARRPARGATTTTKARASGLRQVEGPVSERAYSSSSPAPTHKVTVHDRQRGVVHEFVVPQDQYILHTAEAQDITLPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKDKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPVERDDYALELAMGDE*