Information report for OsNUS1;V1
Gene Details
|
|
Functional Descriptions
- We report here the effects of V1 mutation on the expressions of plastid and nuclear genes during leaf development.
- This period coincides very closely with the leaf developmental stage (late P4) at which the V1 gene gives the signal that determines the virescent phenotype.
- A virescent gene V1 determines the expression timing of plastid genes for transcription/translation apparatus during early leaf development in rice.
- On the contrary, in the V1 seedlings grown at a restrictive temperature (20°C), this stage-specific accumulation of the rpo and rps transcripts was missing.
- The rice nuclear mutant, virescent-1 (V1), is temperature-conditional and develops chlorotic leaves when grown at restrictive temperatures.
Functional Keywords
Literature and News
- Contribution of chloroplast biogenesis to carbon-nitrogen balance during early leaf development in rice . DOI: 10.1007/s10265-009-0277-x ; PMID: 19953291
- A virescent gene V1 determines the expression timing of plastid genes for transcription/translation apparatus during early leaf development in rice . DOI: 10.1046/j.1365-313x.1997.12061241.x
- A plastid protein NUS1 is essential for build-up of the genetic system for early chloroplast development under cold stress conditions . DOI: 10.1111/j.1365-313X.2011.04755.x ; PMID: 21981410
Gene Resources
- UniProt: Q7Y092
- EMBL: AP014959, DP000009
- AlphaFoldDB: Q7Y092
- EnsemblPlants: Os03t0656900-01
- Gramene: Os03t0656900-01
- KEGG: osa:4333618
- Orthologous matrix: VAPPNWK
- InterPro: IPR006027, IPR011605, IPR035926
- PANTHER: PTHR11078, PTHR11078:SF3
- SUPFAM: SSF48013
- Gene3D: 1.10.940.10
- OrthoDB: Q7Y092
- eggNOG: ENOG502QS7J
Sequences
cDNA Sequence
- >LOC_Os03g45400.1
GAGATCCCCACCTCCACCATTTCTCTTTCTCCCACCTCCACCGGCGACGCCACCGCCGCCGCCTCCTCCTCCTCCGCCTCTCTACGGCAGCCTCGCCGCCGCGCCGCGCAGCGCAGCGCAGAGCAACATGGAAGCGACGGGCGCCGCCGTATCCGCCTTCTCCACCGCGTCCTCGTCGAGTCCCGCGGCGCCTAGACACGGCCGTCTCCTGGCGAGCCCCGCGGCGTGGCGCAGCGCACGGACGCTGCCACCACGGGCCGTCGCCTCCTCCCGCGCGACGGTCCTCGTCTCGAACCCTCCTCCGCCGCCGCTGCCGCCGACACCCGCTCCTGCTGCGGTCGCGCCCTCCAAGGTCGACCGGTCCGGGCGGTTCTGTAGCCCCCGCGCCGCTCGCGAGCTCGCGCTGATGATTTCCTACGCGGCTTGCCTTGAGGGCGCCGACGTGGTGCGGCTCTTCGACCGCAGAATCAGCGCGAGAAGAGAACCTGGCTATGTTTTCGATAAGGCGTGCGTGGTGAACTACAACCATATGAGCTTCGGTGGGGGACCTCTGGAGGTCGGGACAGAGGAGGAGGCTGAGAAGCTCATGAGTCAGAACGAGAAGGATTCAGCAAATGAAGCAGAAGTTCTTTCAGCTCCTCCAAAGCTGGTGTACAACAACTTTGTGTTACGACTGGCTCGAGAAATTTTAGTGGCTGTTGCCAGTGGATGGGACAAGCATGTTGATATCATCAACAAAATAACTCCCCAGAATTGGAAGGACGAACCTGTTGCAAGGATCCTTGAACTTTGTATTCTTCATATTGCCATGGCAGAGATGACATCAAAAGGAACACCTCACAAAATTGTCATTAACGAGGCTGTGGATTTGGCAAAACGGTTCTGTGATGGTGGTGCTCCTCGGGTAATCAATGGATGCCTTCGGACATTTGTGAAGGATCACATGAACATTGACACCAGTCAGCCAGCTCCAGCTGAGTCAAAAGCGTGAAGTTTTTGCAAATATGAAAATATGAATCATCACAAATATGATTCAAAGAATAGAAGCACGGAGAAAATCCTGCTCTCTTTGTCTGATCTCCTTTGGTTGTTTAAAGATTGATTGGTGAAGTTGAAAGGAGGCAAACATGCTGGACTTGTGGAGAACTAGAAGTATCTTCAATATTTAGCTGGTGGTTAGACTAGATATGTTGAGCCATATACTGATGATGCACTCTTCTTGAAGAACTAAATGACACTACTTCTAACAGCTTTTGCCATGCTGATTCCTGTGCTTAATGGGACAAGAGAACCTGTATCATAGTGTATGTGTAAAGTTGCAAGGTAAGGGTTGCATCTCTCAATTTCACAATAACGTGCTTGAGCTGCTGAGTAAGTTGGGAGTTGGGAGTTTGCAGCTGATACTATGGAAGATGCATTTTCTCCAAGATTTGGATATGATATATTGTGTAATTCTACCTGCACACGAGTTCTGTTCAAATATAAATTTGGTACACCTCTAATAGTATTTGTATTGTATATGGCTGCAAACTTTTCCTACGAAATTCTTTGTAAGTAGCATGGGTTGTAACCTGCTTAACGATCCAATGATTGCTGCTTTAATTAATAAGTTTGTTGCAGGAGAATTTTCTTTTTCTTTAGGATATA
CDS Sequence
- >LOC_Os03g45400.1
ATGGAAGCGACGGGCGCCGCCGTATCCGCCTTCTCCACCGCGTCCTCGTCGAGTCCCGCGGCGCCTAGACACGGCCGTCTCCTGGCGAGCCCCGCGGCGTGGCGCAGCGCACGGACGCTGCCACCACGGGCCGTCGCCTCCTCCCGCGCGACGGTCCTCGTCTCGAACCCTCCTCCGCCGCCGCTGCCGCCGACACCCGCTCCTGCTGCGGTCGCGCCCTCCAAGGTCGACCGGTCCGGGCGGTTCTGTAGCCCCCGCGCCGCTCGCGAGCTCGCGCTGATGATTTCCTACGCGGCTTGCCTTGAGGGCGCCGACGTGGTGCGGCTCTTCGACCGCAGAATCAGCGCGAGAAGAGAACCTGGCTATGTTTTCGATAAGGCGTGCGTGGTGAACTACAACCATATGAGCTTCGGTGGGGGACCTCTGGAGGTCGGGACAGAGGAGGAGGCTGAGAAGCTCATGAGTCAGAACGAGAAGGATTCAGCAAATGAAGCAGAAGTTCTTTCAGCTCCTCCAAAGCTGGTGTACAACAACTTTGTGTTACGACTGGCTCGAGAAATTTTAGTGGCTGTTGCCAGTGGATGGGACAAGCATGTTGATATCATCAACAAAATAACTCCCCAGAATTGGAAGGACGAACCTGTTGCAAGGATCCTTGAACTTTGTATTCTTCATATTGCCATGGCAGAGATGACATCAAAAGGAACACCTCACAAAATTGTCATTAACGAGGCTGTGGATTTGGCAAAACGGTTCTGTGATGGTGGTGCTCCTCGGGTAATCAATGGATGCCTTCGGACATTTGTGAAGGATCACATGAACATTGACACCAGTCAGCCAGCTCCAGCTGAGTCAAAAGCGTGA
Protein Sequence
- >LOC_Os03g45400.1
MEATGAAVSAFSTASSSSPAAPRHGRLLASPAAWRSARTLPPRAVASSRATVLVSNPPPPPLPPTPAPAAVAPSKVDRSGRFCSPRAARELALMISYAACLEGADVVRLFDRRISARREPGYVFDKACVVNYNHMSFGGGPLEVGTEEEAEKLMSQNEKDSANEAEVLSAPPKLVYNNFVLRLAREILVAVASGWDKHVDIINKITPQNWKDEPVARILELCILHIAMAEMTSKGTPHKIVINEAVDLAKRFCDGGAPRVINGCLRTFVKDHMNIDTSQPAPAESKA*