Information report for WAL3
Gene Details
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Functional Descriptions
- In this study, we identified a new PLS-type protein, WAL3 (Whole Albino Leaf on Chromosome 3), playing important roles in plant chloroplast development.
- WAL3 encoding a PLS-type PPR protein regulates chloroplast development in rice.
- Knockout of WAL3 gene in Nipponbare variety caused abnormal chloroplast development and showed an albino lethal phenotype.
- In summary, our study revealed that WAL3 is essential for chloroplast development in rice.
- The decreased abundance of photosynthesis-related proteins in WAL3 mutants indicated WAL3 influence photosynthesis.
- Transcriptome sequencing showed that WAL3 involved in multiple metabolic pathways including the chlorophyll synthesis and photosynthetic related metabolic pathways.
Functional Keywords
Literature and News
Gene Resources
- UniProt: C7J021
- EMBL: AC145383, AP008209
- AlphaFoldDB: C7J021
- EnsemblPlants: Os03t0644200-01
- Gramene: Os03t0644200-01
- KEGG: dosa:Os03g0644100, osa:9269748
- Orthologous matrix: MFVCLLN
- InterPro: IPR002885, IPR011990, IPR046960
- PANTHER: PTHR47926, PTHR47926:SF411
- PROSITE: PS51375
- Gene3D: 1.25.40.10
- OrthoDB: C7J021
- SWISS-MODEL: C7J021
Sequences
cDNA Sequence
- >LOC_Os03g44210.2
ATCTTTTGTCCCCTCGCCCGCAATCCACCCACCTCTCGAGCTCACAAAAATCGCTCGCCCCCCTCCACCTCCACCTCGCTCCCGCCGCCTCCACCACCCATCTCCGCCCTCGTCCGCTCGCCGGCAAGCCGCTGCTGCTGCAGCTGCTTGCTCGTCTCGTCTCCCCATCCCTGGGCGGGGCGCGGTGGGAGGGGGGCGGGGGACTCGCCACCGCTCTCCGTTCCGTGGGTGTCTCTGCACTCTGCTTTGCTCCTCTTCTTCCCCCCCTCTGGTTCCACCCCCGCGCGGCGGAGCGCGGGGGAAGGGATCCACAGATGCTGTTCTGCTGCCCTGCTTCTCCTCCCCCTCCAATCCAAGCTTCTTCTCTCCCGCCGTTCCGGACGAACAGCTTGTCTCCGACCGTACGTGGCGGGAATGCCGCGCCACGACGCCCTCTCGCGCGGTCTTTCTCGGCCAAGAACCGGTCCCCGCGAGCGCGGAACCGCCACGCGGCAGCAGGTGATGGTGGTGGTTATGGGTCTCCGGAGCAAGAGGGGCGTGGGGAATCGTCCCTCCCGAACGCCGAGGCGCTCGCGTCCTCGCTGCGTGATTGCGGCGGCGCGGACGGCGTCCGGCGGGTGCACGCGGTTGCTGTCCGGTCGCTCGACAGCCTGGGGACGTTCGTCGCCAACAATTTGATCAGCGCGTATGCCAGGTTCGACGAGGTTTCGGATGCCAGGGAGGTGTTCGACGAAATGCCGGAGAGGAGTGTTGTGTCGTGGACGGCGATGATGAATGTGTATCTGAAACTAGGACACTACGGCGAGGTTGTGAGGCTCTTCTTTGATATGGTGGGAAGCGGAGTGCAAGGTAACAGCTTGACTTTTGTTTGCTTGCTGAAATCATGCGGCGAGCGTTGCGATGCTAAGCTAGGGCAGCAGGTCCACTGTTGTATTGTCAAAGGTGGGTGGAGCAATGTGATAGTGGACAGTGCTATTGCACACTTCTATGCTCAATGCGGTGATGTTGCTAGTGCTTCAGCCATATTTGATAAGATGGCCTATCGTGATGTCATCTCATGGACAACAATGATCACAGCTTATGTGCAGCATGGGCATGGGGGCCAAGCTCTTAGAATGTTTTCAGAAATGGTGTCAGAAGGATTTCGACCAAATGAGTTCACTGTGTGCAGTGTCCTCAAGGCTTGTGCAGAAGAGAAAGCTGTGAGATTTGGGAAGCAGCTGCATTGTGCTGTTTTGAAGAAAATGTACAAAAATGACATCCATATCGGCAGTGCCCTTGTCACCATGTATGCTAGATGCGGTGAAGTTTTTGATGCTCAGGCAGTGTTTGATATGATGCCACGAAGAAACACTATTACATGGACTTCTATGATCTCTGGCTATGCACAAAGTGGCCATGGAGAAAAGGCTATCTTGTTGTTCAGAAAGATGAAGATGCGCCGAGTATTTGTTAACAACCTCACCATTGTTGGTCTCCTAAGTGCCTGTGGCTCCTTACAGTCGCCTTATCTTGGAAAGGAATTGCATGCTCAGATAATAAAGAATTCTATGGAAGAAAATCTTCAAATTGGGAGTACACTTGTTTGGTTCTACTGTAAATGTGGAGAGTACACATATGCTGCAAGAATTCTTGAAGCGATGCCTGACCGTGATGCTATCTCATGGACTGCTCTGATTTCCGGCTACAATAATCTAGGTCATAATGTTGAAGCACTTAAATCATTAGATGATATGCTATGGGATGGTGTAAAACCAAATACATACACTTACTCCTCGGCTCTGAAAGCTTGTGCAAAATTGGAGGCTCTGCAATATGGAAGGAAGATCCATGGTTTTGTTAACAAGACTCAAGATTTCTCCAATGTGTTTGTGGGAAGCTCACTTATCGATATGTACATGAGGTGTGGAAAAGTCGACGAAGCCCGAAGTGTCTTTGATGCCATGCCAGAACATAACCTTGTGACATGGAAAGTGATTATTACAGGATTTGCTCAGAATGGCCTCTGTGAAGAGGCTTTGAAGTACATGTACCTAATGCAACAAGAAGGGCATGAGGTTGATGATTTTGTGCTCTCAACAGTTCTGACATCATGTGGAGATCTTCAATGGAAATCCATCTCCTTCTCTGACTCAGTTGCTGGTTCAGTTTCAGCTAGGCAGTAGATTAGTTCTCCCGTGGCAAAGAAGCTAGCACTTCTGTACAGTTACAGAGATTTGTTATTGTGCAAGATCAGAAGACATGTAGCACAAAAAGTTTATTTTCAACAGGGATTTGAAGTGCTGTCCTAAATTTAACAAACTGAAGACTCTGGTACTTAATGATTGGTGTGTGGCTTCTGACCTCAATGCACTAATTTATTTTCTGCAACACTCACCAGTTCTGGAGAAGCTTACACTACAGCTTTCCAAGACATGAAAAGATTCATTGCAAACAACTGGAAATTACAAGTATCTTAAGAAGGTTCCATTTGACCTTAAGAAGGTTGAAAGCAAATGTGATGAAGTTGATGAAAGAGTTTGTGAAGTTCTCAAGATCTTGAGTGCTTATGTAACACCGCTCCAAATTGATATGAGAGATATATGTGAGTTAAATATTTAATACCACTCCTTTCAATTTATCAAAATATCTATAAATTGTAACCATGCAGTGAGGAAAATATTTGGCTAATTAGAGGGAAGCAATTGTTCAGGACAGGTAGAAACTCTCCCCATATTTCATGAACAGAAAGTGAAAGCAATTGTCAAGCATCATCATACATAAGC - >LOC_Os03g44210.1
ATCTTTTGTCCCCTCGCCCGCAATCCACCCACCTCTCGAGCTCACAAAAATCGCTCGCCCCCCTCCACCTCCACCTCGCTCCCGCCGCCTCCACCACCCATCTCCGCCCTCGTCCGCTCGCCGGCAAGCCGCTGCTGCTGCAGCTGCTTGCTCGTCTCGTCTCCCCATCCCTGGGCGGGGCGCGGTGGGAGGGGGGCGGGGGACTCGCCACCGCTCTCCGTTCCGTGGGTGTCTCTGCACTCTGCTTTGCTCCTCTTCTTCCCCCCCTCTGGTTCCACCCCCGCGCGGCGGAGCGCGGGGGAAGGGATCCACAGATGCTGTTCTGCTGCCCTGCTTCTCCTCCCCCTCCAATCCAAGCTTCTTCTCTCCCGCCGTTCCGGACGAACAGCTTGTCTCCGACCGTACGTGGCGGGAATGCCGCGCCACGACGCCCTCTCGCGCGGTCTTTCTCGGCCAAGAACCGGTCCCCGCGAGCGCGGAACCGCCACGCGGCAGCAGGTGATGGTGGTGGTTATGGGTCTCCGGAGCAAGAGGGGCGTGGGGAATCGTCCCTCCCGAACGCCGAGGCGCTCGCGTCCTCGCTGCGTGATTGCGGCGGCGCGGACGGCGTCCGGCGGGTGCACGCGGTTGCTGTCCGGTCGCTCGACAGCCTGGGGACGTTCGTCGCCAACAATTTGATCAGCGCGTATGCCAGGTTCGACGAGGTTTCGGATGCCAGGGAGGTGTTCGACGAAATGCCGGAGAGGAGTGTTGTGTCGTGGACGGCGATGATGAATGTGTATCTGAAACTAGGACACTACGGCGAGGTTGTGAGGCTCTTCTTTGATATGGTGGGAAGCGGAGTGCAAGGTAACAGCTTGACTTTTGTTTGCTTGCTGAAATCATGCGGCGAGCGTTGCGATGCTAAGCTAGGGCAGCAGGTCCACTGTTGTATTGTCAAAGGTGGGTGGAGCAATGTGATAGTGGACAGTGCTATTGCACACTTCTATGCTCAATGCGGTGATGTTGCTAGTGCTTCAGCCATATTTGATAAGATGGCCTATCGTGATGTCATCTCATGGACAACAATGATCACAGCTTATGTGCAGCATGGGCATGGGGGCCAAGCTCTTAGAATGTTTTCAGAAATGGTGTCAGAAGGATTTCGACCAAATGAGTTCACTGTGTGCAGTGTCCTCAAGGCTTGTGCAGAAGAGAAAGCTGTGAGATTTGGGAAGCAGCTGCATTGTGCTGTTTTGAAGAAAATGTACAAAAATGACATCCATATCGGCAGTGCCCTTGTCACCATGTATGCTAGATGCGGTGAAGTTTTTGATGCTCAGGCAGTGTTTGATATGATGCCACGAAGAAACACTATTACATGGACTTCTATGATCTCTGGCTATGCACAAAGTGGCCATGGAGAAAAGGCTATCTTGTTGTTCAGAAAGATGAAGATGCGCCGAGTATTTGTTAACAACCTCACCATTGTTGGTCTCCTAAGTGCCTGTGGCTCCTTACAGTCGCCTTATCTTGGAAAGGAATTGCATGCTCAGATAATAAAGAATTCTATGGAAGAAAATCTTCAAATTGGGAGTACACTTGTTTGGTTCTACTGTAAATGTGGAGAGTACACATATGCTGCAAGAATTCTTGAAGCGATGCCTGACCGTGATGCTATCTCATGGACTGCTCTGATTTCCGGCTACAATAATCTAGGTCATAATGTTGAAGCACTTAAATCATTAGATGATATGCTATGGGATGGTGTAAAACCAAATACATACACTTACTCCTCGGCTCTGAAAGCTTGTGCAAAATTGGAGGCTCTGCAATATGGAAGGAAGATCCATGGTTTTGTTAACAAGACTCAAGATTTCTCCAATGTGTTTGTGGGAAGCTCACTTATCGATATGTACATGAGGTGTGGAAAAGTCGACGAAGCCCGAAGTGTCTTTGATGCCATGCCAGAACATAACCTTGTGACATGGAAAGTGATTATTACAGGATTTGCTCAGAATGGCCTCTGTGAAGAGGCTTTGAAGTACATGTACCTAATGCAACAAGAAGGGCATGAGGTTGATGATTTTGTGCTCTCAACAGTTCTGACATCATGTGGAGATCTTCAATGGAAATCCATCTCCTTCTCTGACTCAGTTGCTGGTTCAGTTTCAGCTAGGCAGTAGATTAGTTCTCCCGTGGCAAAGAAGCTAGCACTTCTGTACAGTTACAGAGATTTGTTATTGTGCAAGATCAGAAGACATGTAGCACAAAAAGTTTATTTTCAACAGGGATTTGAAGTGCTGTCCTAAATTTAACAAACTGAAGACTCTGGTACTTAATGATTGGTGTGTGGCTTCTGACCTCAATGCACTAATTTATTTTCTGCAACACTCACCAGTTCTGGAGAAGCTTACACTACAGCTTTCCAAGACATGAAAAGATTCATTGCAAACAACTGGAAATTACAAGTATCTTAAGAAGGTTCCATTTGACCTTAAGAAGGTTGAAAGCAAATGTGATGAAGTTGATGAAAGAGTTTGTGAAGTTCTCAAGATCTTGAGTGCTTATGTAACACCGCTCCAAATTGATATGAGAGATATATGTGAGTTAAATATTTAATACCACTCCTTTCAATTTATCAAAATATCTATAAATTGTAACCATGCAGTGAGGAAAATATTTGGCTAATTAGAGGGAAGCAATTGTTCAGGACAGGTAGAAACTCTCCCCATATTTCATGAACAGAAAGTGAAAGCAATTGTCAAGCATCATCATACATAAGC
CDS Sequence
- >LOC_Os03g44210.2
ATGCTGTTCTGCTGCCCTGCTTCTCCTCCCCCTCCAATCCAAGCTTCTTCTCTCCCGCCGTTCCGGACGAACAGCTTGTCTCCGACCGTACGTGGCGGGAATGCCGCGCCACGACGCCCTCTCGCGCGGTCTTTCTCGGCCAAGAACCGGTCCCCGCGAGCGCGGAACCGCCACGCGGCAGCAGGTGATGGTGGTGGTTATGGGTCTCCGGAGCAAGAGGGGCGTGGGGAATCGTCCCTCCCGAACGCCGAGGCGCTCGCGTCCTCGCTGCGTGATTGCGGCGGCGCGGACGGCGTCCGGCGGGTGCACGCGGTTGCTGTCCGGTCGCTCGACAGCCTGGGGACGTTCGTCGCCAACAATTTGATCAGCGCGTATGCCAGGTTCGACGAGGTTTCGGATGCCAGGGAGGTGTTCGACGAAATGCCGGAGAGGAGTGTTGTGTCGTGGACGGCGATGATGAATGTGTATCTGAAACTAGGACACTACGGCGAGGTTGTGAGGCTCTTCTTTGATATGGTGGGAAGCGGAGTGCAAGGTAACAGCTTGACTTTTGTTTGCTTGCTGAAATCATGCGGCGAGCGTTGCGATGCTAAGCTAGGGCAGCAGGTCCACTGTTGTATTGTCAAAGGTGGGTGGAGCAATGTGATAGTGGACAGTGCTATTGCACACTTCTATGCTCAATGCGGTGATGTTGCTAGTGCTTCAGCCATATTTGATAAGATGGCCTATCGTGATGTCATCTCATGGACAACAATGATCACAGCTTATGTGCAGCATGGGCATGGGGGCCAAGCTCTTAGAATGTTTTCAGAAATGGTGTCAGAAGGATTTCGACCAAATGAGTTCACTGTGTGCAGTGTCCTCAAGGCTTGTGCAGAAGAGAAAGCTGTGAGATTTGGGAAGCAGCTGCATTGTGCTGTTTTGAAGAAAATGTACAAAAATGACATCCATATCGGCAGTGCCCTTGTCACCATGTATGCTAGATGCGGTGAAGTTTTTGATGCTCAGGCAGTGTTTGATATGATGCCACGAAGAAACACTATTACATGGACTTCTATGATCTCTGGCTATGCACAAAGTGGCCATGGAGAAAAGGCTATCTTGTTGTTCAGAAAGATGAAGATGCGCCGAGTATTTGTTAACAACCTCACCATTGTTGGTCTCCTAAGTGCCTGTGGCTCCTTACAGTCGCCTTATCTTGGAAAGGAATTGCATGCTCAGATAATAAAGAATTCTATGGAAGAAAATCTTCAAATTGGGAGTACACTTGTTTGGTTCTACTGTAAATGTGGAGAGTACACATATGCTGCAAGAATTCTTGAAGCGATGCCTGACCGTGATGCTATCTCATGGACTGCTCTGATTTCCGGCTACAATAATCTAGGTCATAATGTTGAAGCACTTAAATCATTAGATGATATGCTATGGGATGGTGTAAAACCAAATACATACACTTACTCCTCGGCTCTGAAAGCTTGTGCAAAATTGGAGGCTCTGCAATATGGAAGGAAGATCCATGGTTTTGTTAACAAGACTCAAGATTTCTCCAATGTGTTTGTGGGAAGCTCACTTATCGATATGTACATGAGGTGTGGAAAAGTCGACGAAGCCCGAAGTGTCTTTGATGCCATGCCAGAACATAACCTTGTGACATGGAAAGTGATTATTACAGGATTTGCTCAGAATGGCCTCTGTGAAGAGGCTTTGAAGTACATGTACCTAATGCAACAAGAAGGGCATGAGGTTGATGATTTTGTGCTCTCAACAGTTCTGACATCATGTGGAGATCTTCAATGGAAATCCATCTCCTTCTCTGACTCAGTTGCTGGTTCAGTTTCAGCTAGGCAGTAG - >LOC_Os03g44210.1
ATGCTGTTCTGCTGCCCTGCTTCTCCTCCCCCTCCAATCCAAGCTTCTTCTCTCCCGCCGTTCCGGACGAACAGCTTGTCTCCGACCGTACGTGGCGGGAATGCCGCGCCACGACGCCCTCTCGCGCGGTCTTTCTCGGCCAAGAACCGGTCCCCGCGAGCGCGGAACCGCCACGCGGCAGCAGGTGATGGTGGTGGTTATGGGTCTCCGGAGCAAGAGGGGCGTGGGGAATCGTCCCTCCCGAACGCCGAGGCGCTCGCGTCCTCGCTGCGTGATTGCGGCGGCGCGGACGGCGTCCGGCGGGTGCACGCGGTTGCTGTCCGGTCGCTCGACAGCCTGGGGACGTTCGTCGCCAACAATTTGATCAGCGCGTATGCCAGGTTCGACGAGGTTTCGGATGCCAGGGAGGTGTTCGACGAAATGCCGGAGAGGAGTGTTGTGTCGTGGACGGCGATGATGAATGTGTATCTGAAACTAGGACACTACGGCGAGGTTGTGAGGCTCTTCTTTGATATGGTGGGAAGCGGAGTGCAAGGTAACAGCTTGACTTTTGTTTGCTTGCTGAAATCATGCGGCGAGCGTTGCGATGCTAAGCTAGGGCAGCAGGTCCACTGTTGTATTGTCAAAGGTGGGTGGAGCAATGTGATAGTGGACAGTGCTATTGCACACTTCTATGCTCAATGCGGTGATGTTGCTAGTGCTTCAGCCATATTTGATAAGATGGCCTATCGTGATGTCATCTCATGGACAACAATGATCACAGCTTATGTGCAGCATGGGCATGGGGGCCAAGCTCTTAGAATGTTTTCAGAAATGGTGTCAGAAGGATTTCGACCAAATGAGTTCACTGTGTGCAGTGTCCTCAAGGCTTGTGCAGAAGAGAAAGCTGTGAGATTTGGGAAGCAGCTGCATTGTGCTGTTTTGAAGAAAATGTACAAAAATGACATCCATATCGGCAGTGCCCTTGTCACCATGTATGCTAGATGCGGTGAAGTTTTTGATGCTCAGGCAGTGTTTGATATGATGCCACGAAGAAACACTATTACATGGACTTCTATGATCTCTGGCTATGCACAAAGTGGCCATGGAGAAAAGGCTATCTTGTTGTTCAGAAAGATGAAGATGCGCCGAGTATTTGTTAACAACCTCACCATTGTTGGTCTCCTAAGTGCCTGTGGCTCCTTACAGTCGCCTTATCTTGGAAAGGAATTGCATGCTCAGATAATAAAGAATTCTATGGAAGAAAATCTTCAAATTGGGAGTACACTTGTTTGGTTCTACTGTAAATGTGGAGAGTACACATATGCTGCAAGAATTCTTGAAGCGATGCCTGACCGTGATGCTATCTCATGGACTGCTCTGATTTCCGGCTACAATAATCTAGGTCATAATGTTGAAGCACTTAAATCATTAGATGATATGCTATGGGATGGTGTAAAACCAAATACATACACTTACTCCTCGGCTCTGAAAGCTTGTGCAAAATTGGAGGCTCTGCAATATGGAAGGAAGATCCATGGTTTTGTTAACAAGACTCAAGATTTCTCCAATGTGTTTGTGGGAAGCTCACTTATCGATATGTACATGAGGTGTGGAAAAGTCGACGAAGCCCGAAGTGTCTTTGATGCCATGCCAGAACATAACCTTGTGACATGGAAAGTGATTATTACAGGATTTGCTCAGAATGGCCTCTGTGAAGAGGCTTTGAAGTACATGTACCTAATGCAACAAGAAGGGCATGAGGTTGATGATTTTGTGCTCTCAACAGTTCTGACATCATGTGGAGATCTTCAATGGAAATCCATCTCCTTCTCTGACTCAGTTGCTGGTTCAGTTTCAGCTAGGCAGTAG
Protein Sequence
- >LOC_Os03g44210.2
MLFCCPASPPPPIQASSLPPFRTNSLSPTVRGGNAAPRRPLARSFSAKNRSPRARNRHAAAGDGGGYGSPEQEGRGESSLPNAEALASSLRDCGGADGVRRVHAVAVRSLDSLGTFVANNLISAYARFDEVSDAREVFDEMPERSVVSWTAMMNVYLKLGHYGEVVRLFFDMVGSGVQGNSLTFVCLLKSCGERCDAKLGQQVHCCIVKGGWSNVIVDSAIAHFYAQCGDVASASAIFDKMAYRDVISWTTMITAYVQHGHGGQALRMFSEMVSEGFRPNEFTVCSVLKACAEEKAVRFGKQLHCAVLKKMYKNDIHIGSALVTMYARCGEVFDAQAVFDMMPRRNTITWTSMISGYAQSGHGEKAILLFRKMKMRRVFVNNLTIVGLLSACGSLQSPYLGKELHAQIIKNSMEENLQIGSTLVWFYCKCGEYTYAARILEAMPDRDAISWTALISGYNNLGHNVEALKSLDDMLWDGVKPNTYTYSSALKACAKLEALQYGRKIHGFVNKTQDFSNVFVGSSLIDMYMRCGKVDEARSVFDAMPEHNLVTWKVIITGFAQNGLCEEALKYMYLMQQEGHEVDDFVLSTVLTSCGDLQWKSISFSDSVAGSVSARQ* - >LOC_Os03g44210.1
MLFCCPASPPPPIQASSLPPFRTNSLSPTVRGGNAAPRRPLARSFSAKNRSPRARNRHAAAGDGGGYGSPEQEGRGESSLPNAEALASSLRDCGGADGVRRVHAVAVRSLDSLGTFVANNLISAYARFDEVSDAREVFDEMPERSVVSWTAMMNVYLKLGHYGEVVRLFFDMVGSGVQGNSLTFVCLLKSCGERCDAKLGQQVHCCIVKGGWSNVIVDSAIAHFYAQCGDVASASAIFDKMAYRDVISWTTMITAYVQHGHGGQALRMFSEMVSEGFRPNEFTVCSVLKACAEEKAVRFGKQLHCAVLKKMYKNDIHIGSALVTMYARCGEVFDAQAVFDMMPRRNTITWTSMISGYAQSGHGEKAILLFRKMKMRRVFVNNLTIVGLLSACGSLQSPYLGKELHAQIIKNSMEENLQIGSTLVWFYCKCGEYTYAARILEAMPDRDAISWTALISGYNNLGHNVEALKSLDDMLWDGVKPNTYTYSSALKACAKLEALQYGRKIHGFVNKTQDFSNVFVGSSLIDMYMRCGKVDEARSVFDAMPEHNLVTWKVIITGFAQNGLCEEALKYMYLMQQEGHEVDDFVLSTVLTSCGDLQWKSISFSDSVAGSVSARQ*