Information report for OsATG6c
Gene Details
|
|
Functional Descriptions
Literature and News
- Regulation of ATG6/Beclin-1 homologs by abiotic stresses and hormones in rice (Oryza sativa L.) . DOI: 10.4238/2012.August.17.3 ; PMID: 22930426
- Genome-wide identification, classification, and expression analysis of autophagy-associated gene homologues in rice (Oryza sativa L.) . DOI: 10.1093/dnares/dsr024 ; PMID: 21795261
Gene Resources
- UniProt: A0A0N7KHQ3
- EMBL: AC145383, AP008209
- AlphaFoldDB: A0A0N7KHQ3
- EnsemblPlants: Os03t0644000-01
- Gramene: Os03t0644000-01
- KEGG: dosa:Os03g0644000, osa:4333557
- Orthologous matrix: TMAQYFF
- InterPro: IPR007243, IPR038274, IPR040455
- PANTHER: PTHR12768, PTHR12768:SF4
- Gene3D: 1.10.418.40
- OrthoDB: A0A0N7KHQ3
- SWISS-MODEL: A0A0N7KHQ3
Homologs
- Arachis hypogaea: arahy.Tifrunner.gnm1.ann1.LSW4XK
Sequences
cDNA Sequence
- >LOC_Os03g44200.2
ACAACCACAGGCCTGAGCCCACCCACACAAACTTTACAGTTTACACGCTACGCAAACGTACGCCCACACGCACGCTACCTCTCTCTCTCTCGACTCCCGAGCAGGCGACTCCTCCCTCCCCGGCGATTCCGCCGCTCCGACCGCCGTCTCTCCGCGCCGCGCACGTGAGCCCCCCGTCGCCTTCCTCGCACGGACTCTGCCCCCGCCGGAATCTCATCTCCTACGCCTCAAACCCCCACCCCGCGACGCCGCCTAGCCGCGATTTTCCTGCGGGGTACTCCACCGCCCCTGGAGGCTGGAGCCGTGCTCTCCGGATCGGCGTTGGATTGGTAGCGCTCGCGTCCTGCTCTGTCGGGCGGCGATATGAAGCCCCCTGCATCCTCCGCCGCCGCTGCCGGCGACAAGGGCGGCGGGGTCGACCCGTCTCTGCCGCGGTTCAAGTGCCAGGAGTGCCAACGCGCGCTCGTCGTCGTCGGCGTCGAGTCCTTCACCGATAAGCTCCCCGCTCATGCCGTCTCCGGTATGAACGTGTCCTCTGTTCAGGGCAGCGTTATGGGTGCTAGCAGGATGGACAACTCTTATGTCGTGCTATCGAAGCAAAATAGATCACATAGCCATGGAATTCCCCCACGCCCGCCAAGCGCAGGGATCCCGCGTGCCGAGCCGAACCAACCAACAAGAGCAATGGAGGGATCATATATAGTGCTTCCACCTGCTGCCGCTTCCATATACAAGACATCTGCCTCTGAAGGAGGTGGTGCGCAGTTGTCACCAACAAGTATGAACCCCGGTAGCCCTTTACCAGGAAATAATTTTCACTCTAGCGTGACTGTATTAAAACGGGCATTTGAGATTGCTACATCACAAACACAGATTGAACAGCCACTCTGTCTGGACTGTATGAGGTTGCTGTCTGATAAAATGGAGAAGGAAATTGAAGATGTTAATACTGACAATAAAGCTTATGAGGCCTGTCTTCAACGTCTGGAGCAGGAAACCTATAACATCCTCAGTGAAACTGACTTTCAGAAGGAGAGACAAAAGATTGAGGAAGAAGAAAAGAAACTTAAAGCTGCAATTGAGGAAGCTGAAAAGCAATATTCAGAAATTTGTTCCGAGATGAAGTGCCTTGAAACAAAATCTAAACAGTTCGAAGAACTGGAAGAAAGGTATTGCCATGATCTCAATAGCTTTCAGTTTCAGTGGATATCTCACCAGGAAGAAAGAGATGCGGTTTTGGCCAAGATAGAAGTTTCGCAGGTTCATCTAGAATTGTTAAAGCGTACAAATGTTCTCAATGATGCATTCTATATTTCACATGATGGGGTGATCGGAACAATAAACAACTTTCGTCTTGGCCGCCTTCCTAATGTACAGGTGGAGTGGGATGAGATAAATGCTGCTTGGGGCCAGGCTGCTCTTCTGTTGCATACCATGGCTCAGTACTTCTTCCCAAAATTTGAATACCGGATCAAAATTCACCCTATGGGAAGCTATCCAAAAGTTACAGACATCAACCAAAATACATATGAACTGTTCGGTCCTGTGAATTTATTCTGGAGTACCCGATTTGACAAAGCCATGACATGGTTTCTGACTTGCTTGCAAGAATTTGCTGATTTTGCTGTTAGTTTGGATAAAGAGAACAATGTACCACCTGACAAGTCATTGAAGCTCCCATATAAGATTGAAGGTGACAAAGTAGGGAGCTATACAATCTTCTTAAGTTTCAATAAACTTGACAATTGGACAAAAGCACTAAAATACATGCTGTGCAACTTGAAGTGGGTTCTCTACTGGTTTATCGGCAATACAAGTTTTGCCCCACCCTCTGGATCTTTACACGTAGCACAGTCTTCCAAGGGATGAAGTCACTGGCTTGTGATGCTGATTATAAGCGCATATTGGCAAATGGCATTGACTAGGCTCGTTTGTAATTTACAGTAGTACATACAGCTAGTTTTTTTTTTCCTTTTGGCCGCCTTCAGTTGTACTTCCTCCGTTTCACAATGAAATGCTAGAATGACTTACATTGTGAAACGGGGGGAGTATATATGGTTGAAATCTGCACAGGAGAAATTGCAGATGATGGTGCAACTCAGCTTATAGTCGGCTTGATCATTATTCATGTAATTATTTAGCCATGTGTGACAGAAAATGCGAGTGATACGAGATCCTAGAGCAATTCATGCAGCTCTGGTTAGGTGAGTTTGTGATGGTGCAATCAACAGCATATCCAATCAACATTAAGATTTATAAGAGATGAAATGTCTTCAGCAACACATACTTGAGATGAAACTAAAGTTATCTTGCG - >LOC_Os03g44200.1
ACAACCACAGGCCTGAGCCCACCCACACAAACTTTACAGTTTACACGCTACGCAAACGTACGCCCACACGCACGCTACCTCTCTCTCTCTCGACTCCCGAGCAGGCGACTCCTCCCTCCCCGGCGATTCCGCCGCTCCGACCGCCGTCTCTCCGCGCCGCGCACGTGAGCCCCCCGTCGCCTTCCTCGCACGGACTCTGCCCCCGCCGGAATCTCATCTCCTACGCCTCAAACCCCCACCCCGCGACGCCGCCTAGCCGCGATTTTCCTGCGGGGTACTCCACCGCCCCTGGAGGCTGGAGCCGTGCTCTCCGGATCGGCGTTGGATTGGTAGCGCTCGCGTCCTGCTCTGTCGGGCGGCGATATGAAGCCCCCTGCATCCTCCGCCGCCGCTGCCGGCGACAAGGGCGGCGGGGTCGACCCGTCTCTGCCGCGGTTCAAGTGCCAGGAGTGCCAACGCGCGCTCGTCGTCGTCGGCGTCGAGTCCTTCACCGATAAGCTCCCCGCTCATGCCGTCTCCGGTATGAACGTGTCCTCTGTTCAGGGCAGCGTTATGGGTGCTAGCAGGATGGACAACTCTTATGTCGTGCTATCGAAGCAAAATAGATCACATAGCCATGGAATTCCCCCACGCCCGCCAAGCGCAGGGATCCCGCGTGCCGAGCCGAACCAACCAACAAGAGCAATGGAGGGATCATATATAGTGCTTCCACCTGCTGCCGCTTCCATATACAAGACATCTGCCTCTGAAGGAGGTGGTGCGCAGTTGTCACCAACAAGTATGAACCCCGGTAGCCCTTTACCAGGAAATAATTTTCACTCTAGCGTGACTGTATTAAAACGGGCATTTGAGATTGCTACATCACAAACACAGATTGAACAGCCACTCTGTCTGGACTGTATGAGGTTGCTGTCTGATAAAATGGAGAAGGAAATTGAAGATGTTAATACTGACAATAAAGCTTATGAGGCCTGTCTTCAACGTCTGGAGCAGGAAACCTATAACATCCTCAGTGAAACTGACTTTCAGAAGGAGAGACAAAAGATTGAGGAAGAAGAAAAGAAACTTAAAGCTGCAATTGAGGAAGCTGAAAAGCAATATTCAGAAATTTGTTCCGAGATGAAGTGCCTTGAAACAAAATCTAAACAGTTCGAAGAACTGGAAGAAAGGTATTGCCATGATCTCAATAGCTTTCAGTTTCAGTGGATATCTCACCAGGAAGAAAGAGATGCGGTTTTGGCCAAGATAGAAGTTTCGCAGGTTCATCTAGAATTGTTAAAGCGTACAAATGTTCTCAATGATGCATTCTATATTTCACATGATGGGGTGATCGGAACAATAAACAACTTTCGTCTTGGCCGCCTTCCTAATGTACAGGTGGAGTGGGATGAGATAAATGCTGCTTGGGGCCAGGCTGCTCTTCTGTTGCATACCATGGCTCAGTACTTCTTCCCAAAATTTGAATACCGGATCAAAATTCACCCTATGGGAAGCTATCCAAAAGTTACAGACATCAACCAAAATACATATGAACTGTTCGGTCCTGTGAATTTATTCTGGAGTACCCGATTTGACAAAGCCATGACATGGTTTCTGACTTGCTTGCAAGAATTTGCTGATTTTGCTGTTAGTTTGGATAAAGAGAACAATGTACCACCTGACAAGTCATTGAAGCTCCCATATAAGATTGAAGGTGACAAAGTAGGGAGCTATACAATCTTCTTAAGTTTCAATAAACTTGACAATTGGACAAAAGCACTAAAATACATGCTGTGCAACTTGAAGTGGGTTCTCTACTGGTTTATCGGCAATACAAGTTTTGCCCCACCCTCTGGATCTTTACACGTAGCACAGTCTTCCAAGGGATGAAGTCACTGGCTTGTGATGCTGATTATAAGCGCATATTGGCAAATGGCATTGACTAGGCTCGTTTGTAATTTACAGTAGTACATACAGCTAGTTTTTTTTTTCCTTTTGGCCGCCTTCAGTTGTACTTCCTCCGTTTCACAATGAAATGCTAGAATGACTTACATTGTGAAACGGGGGGAGTATATATGGTTGAAATCTGCACAGGAGAAATTGCAGATGATGGTGCAACTCAGCTTATAGTCGGCTTGATCATTATTCATGTAATTATTTAGCCATGTGTGACAGAAAATGCGAGTGATACGAGATCCTAGAGCAATTCATGCAGCTCTGGTTAGGTGAGTTTGTGATGGTGCAATCAACAGCATATCCAATCAACATTAAGATTTATAAGAGATGAAATGTCTTCAGCAACACATACTTGAGATGAAACTAAAGTTATCTTGCG
CDS Sequence
- >LOC_Os03g44200.2
ATGAAGCCCCCTGCATCCTCCGCCGCCGCTGCCGGCGACAAGGGCGGCGGGGTCGACCCGTCTCTGCCGCGGTTCAAGTGCCAGGAGTGCCAACGCGCGCTCGTCGTCGTCGGCGTCGAGTCCTTCACCGATAAGCTCCCCGCTCATGCCGTCTCCGGTATGAACGTGTCCTCTGTTCAGGGCAGCGTTATGGGTGCTAGCAGGATGGACAACTCTTATGTCGTGCTATCGAAGCAAAATAGATCACATAGCCATGGAATTCCCCCACGCCCGCCAAGCGCAGGGATCCCGCGTGCCGAGCCGAACCAACCAACAAGAGCAATGGAGGGATCATATATAGTGCTTCCACCTGCTGCCGCTTCCATATACAAGACATCTGCCTCTGAAGGAGGTGGTGCGCAGTTGTCACCAACAAGTATGAACCCCGGTAGCCCTTTACCAGGAAATAATTTTCACTCTAGCGTGACTGTATTAAAACGGGCATTTGAGATTGCTACATCACAAACACAGATTGAACAGCCACTCTGTCTGGACTGTATGAGGTTGCTGTCTGATAAAATGGAGAAGGAAATTGAAGATGTTAATACTGACAATAAAGCTTATGAGGCCTGTCTTCAACGTCTGGAGCAGGAAACCTATAACATCCTCAGTGAAACTGACTTTCAGAAGGAGAGACAAAAGATTGAGGAAGAAGAAAAGAAACTTAAAGCTGCAATTGAGGAAGCTGAAAAGCAATATTCAGAAATTTGTTCCGAGATGAAGTGCCTTGAAACAAAATCTAAACAGTTCGAAGAACTGGAAGAAAGGTATTGCCATGATCTCAATAGCTTTCAGTTTCAGTGGATATCTCACCAGGAAGAAAGAGATGCGGTTTTGGCCAAGATAGAAGTTTCGCAGGTTCATCTAGAATTGTTAAAGCGTACAAATGTTCTCAATGATGCATTCTATATTTCACATGATGGGGTGATCGGAACAATAAACAACTTTCGTCTTGGCCGCCTTCCTAATGTACAGGTGGAGTGGGATGAGATAAATGCTGCTTGGGGCCAGGCTGCTCTTCTGTTGCATACCATGGCTCAGTACTTCTTCCCAAAATTTGAATACCGGATCAAAATTCACCCTATGGGAAGCTATCCAAAAGTTACAGACATCAACCAAAATACATATGAACTGTTCGGTCCTGTGAATTTATTCTGGAGTACCCGATTTGACAAAGCCATGACATGGTTTCTGACTTGCTTGCAAGAATTTGCTGATTTTGCTGTTAGTTTGGATAAAGAGAACAATGTACCACCTGACAAGTCATTGAAGCTCCCATATAAGATTGAAGGTGACAAAGTAGGGAGCTATACAATCTTCTTAAGTTTCAATAAACTTGACAATTGGACAAAAGCACTAAAATACATGCTGTGCAACTTGAAGTGGGTTCTCTACTGGTTTATCGGCAATACAAGTTTTGCCCCACCCTCTGGATCTTTACACGTAGCACAGTCTTCCAAGGGATGA - >LOC_Os03g44200.1
ATGAAGCCCCCTGCATCCTCCGCCGCCGCTGCCGGCGACAAGGGCGGCGGGGTCGACCCGTCTCTGCCGCGGTTCAAGTGCCAGGAGTGCCAACGCGCGCTCGTCGTCGTCGGCGTCGAGTCCTTCACCGATAAGCTCCCCGCTCATGCCGTCTCCGGTATGAACGTGTCCTCTGTTCAGGGCAGCGTTATGGGTGCTAGCAGGATGGACAACTCTTATGTCGTGCTATCGAAGCAAAATAGATCACATAGCCATGGAATTCCCCCACGCCCGCCAAGCGCAGGGATCCCGCGTGCCGAGCCGAACCAACCAACAAGAGCAATGGAGGGATCATATATAGTGCTTCCACCTGCTGCCGCTTCCATATACAAGACATCTGCCTCTGAAGGAGGTGGTGCGCAGTTGTCACCAACAAGTATGAACCCCGGTAGCCCTTTACCAGGAAATAATTTTCACTCTAGCGTGACTGTATTAAAACGGGCATTTGAGATTGCTACATCACAAACACAGATTGAACAGCCACTCTGTCTGGACTGTATGAGGTTGCTGTCTGATAAAATGGAGAAGGAAATTGAAGATGTTAATACTGACAATAAAGCTTATGAGGCCTGTCTTCAACGTCTGGAGCAGGAAACCTATAACATCCTCAGTGAAACTGACTTTCAGAAGGAGAGACAAAAGATTGAGGAAGAAGAAAAGAAACTTAAAGCTGCAATTGAGGAAGCTGAAAAGCAATATTCAGAAATTTGTTCCGAGATGAAGTGCCTTGAAACAAAATCTAAACAGTTCGAAGAACTGGAAGAAAGGTATTGCCATGATCTCAATAGCTTTCAGTTTCAGTGGATATCTCACCAGGAAGAAAGAGATGCGGTTTTGGCCAAGATAGAAGTTTCGCAGGTTCATCTAGAATTGTTAAAGCGTACAAATGTTCTCAATGATGCATTCTATATTTCACATGATGGGGTGATCGGAACAATAAACAACTTTCGTCTTGGCCGCCTTCCTAATGTACAGGTGGAGTGGGATGAGATAAATGCTGCTTGGGGCCAGGCTGCTCTTCTGTTGCATACCATGGCTCAGTACTTCTTCCCAAAATTTGAATACCGGATCAAAATTCACCCTATGGGAAGCTATCCAAAAGTTACAGACATCAACCAAAATACATATGAACTGTTCGGTCCTGTGAATTTATTCTGGAGTACCCGATTTGACAAAGCCATGACATGGTTTCTGACTTGCTTGCAAGAATTTGCTGATTTTGCTGTTAGTTTGGATAAAGAGAACAATGTACCACCTGACAAGTCATTGAAGCTCCCATATAAGATTGAAGGTGACAAAGTAGGGAGCTATACAATCTTCTTAAGTTTCAATAAACTTGACAATTGGACAAAAGCACTAAAATACATGCTGTGCAACTTGAAGTGGGTTCTCTACTGGTTTATCGGCAATACAAGTTTTGCCCCACCCTCTGGATCTTTACACGTAGCACAGTCTTCCAAGGGATGA
Protein Sequence
- >LOC_Os03g44200.2
MKPPASSAAAAGDKGGGVDPSLPRFKCQECQRALVVVGVESFTDKLPAHAVSGMNVSSVQGSVMGASRMDNSYVVLSKQNRSHSHGIPPRPPSAGIPRAEPNQPTRAMEGSYIVLPPAAASIYKTSASEGGGAQLSPTSMNPGSPLPGNNFHSSVTVLKRAFEIATSQTQIEQPLCLDCMRLLSDKMEKEIEDVNTDNKAYEACLQRLEQETYNILSETDFQKERQKIEEEEKKLKAAIEEAEKQYSEICSEMKCLETKSKQFEELEERYCHDLNSFQFQWISHQEERDAVLAKIEVSQVHLELLKRTNVLNDAFYISHDGVIGTINNFRLGRLPNVQVEWDEINAAWGQAALLLHTMAQYFFPKFEYRIKIHPMGSYPKVTDINQNTYELFGPVNLFWSTRFDKAMTWFLTCLQEFADFAVSLDKENNVPPDKSLKLPYKIEGDKVGSYTIFLSFNKLDNWTKALKYMLCNLKWVLYWFIGNTSFAPPSGSLHVAQSSKG* - >LOC_Os03g44200.1
MKPPASSAAAAGDKGGGVDPSLPRFKCQECQRALVVVGVESFTDKLPAHAVSGMNVSSVQGSVMGASRMDNSYVVLSKQNRSHSHGIPPRPPSAGIPRAEPNQPTRAMEGSYIVLPPAAASIYKTSASEGGGAQLSPTSMNPGSPLPGNNFHSSVTVLKRAFEIATSQTQIEQPLCLDCMRLLSDKMEKEIEDVNTDNKAYEACLQRLEQETYNILSETDFQKERQKIEEEEKKLKAAIEEAEKQYSEICSEMKCLETKSKQFEELEERYCHDLNSFQFQWISHQEERDAVLAKIEVSQVHLELLKRTNVLNDAFYISHDGVIGTINNFRLGRLPNVQVEWDEINAAWGQAALLLHTMAQYFFPKFEYRIKIHPMGSYPKVTDINQNTYELFGPVNLFWSTRFDKAMTWFLTCLQEFADFAVSLDKENNVPPDKSLKLPYKIEGDKVGSYTIFLSFNKLDNWTKALKYMLCNLKWVLYWFIGNTSFAPPSGSLHVAQSSKG*