Gene Details:
- MSU gene ID: LOC_Os03g40920
- RAPdb gene ID: Os03g0606200
- Gene Symbol: RMtATP6
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Analysis of RMtATP6 mRNA levels suggested that the expression of this gene was induced by stress from sodium carbonates and other sodium salts.
- Transgenic tobacco overexpressing the RMtATP6 gene had greater tolerance to salt stress at the seedling stage than untransformed tobacco.
- These data suggest that the RMtATP6 protein acts as a subunit of ATP synthase, and is expressed in response to stress from several salts, with the other genes coding for the subunits of the same ATP-synthase.
- Identification of a mitochondrial ATP synthase small subunit gene (RMtATP6) expressed in response to salts and osmotic stresses in rice (Oryza sativa L.).
- A cDNA clone isolated from this library was identified by a homology search as a mitochondrial ATP synthase 6 kDa subunit gene (RMtATP6; GenBank accession nos AB055076, BAB21526).
- In transformed yeast and tobacco protoplasts, the RMtATP6 protein was localized in mitochondria using the green fluorescent protein (GFP) marker.
Function-related keywords:
- salt , mitochondria , salt-stress , seedling
Literature:
- Identification of a mitochondrial ATP synthase small subunit gene (RMtATP6) expressed in response to salts and osmotic stresses in rice (Oryza sativa L.) . DOI: 10.1093/jxb/erj025 ; PMID: 16317034
Related News:
Gene Resources:
- NCBI ID: AB055076
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os03g40920.1
ATGGCGGTAGAGCTTGAATTGTTCCAGAAGGACAGCAAAGGCAGATTCCCTTGGGGGCCCACTAAAATCTGGCCCACGTGGAGGAGAGGCGAGGCCCATCTCCATGCGGCGGCGCCCCTGCCTAACCCTAAACGCGATGCGATAACCACCACCACCATCCGCTTCTTCCCCCTTCGGATCGAGAAAAAAGCGAAAGGACCTCTTGACCCCCCAACCACACCGAGGCCGCCGCGGAGGAGGAGGAAGAGGAGGAGATCGAGGATGTTTTTCAGCCGCTTCGATCCGTGGCCGGTGTTCTTCCGGAGGGAGTGGAAGCGCTGCTGGCCCTTCCTCACCGGCTTCGCCGTCACCGGCGCCATCATCACCAAGATGACCGCCGGCTTCACCGAGGAGGACCTCAAGAACTCCAAGTTCGTCCAGGCGCACAAGAAGCACTGATCTGATCCGTGCCTCCATGGTAAATCCCCCCGCGCGCCTCCTTCCTCGATCTCGTCTCCCCTCCGGCTGAGATCTGGTTCTTTCCGCTGTCCTGCGGTAGATCTGGTTTGTAGAAACTATTTGGGGGTTATTATTGTTTGTTCCTGCTTTAAGCTGGGCATGGTATGGTGTGATTTGGTTTCGATTTGAATCGAATCGCTAGGATTGCAGCAACATCACTTCCCGCGAAACGGGAGAGTAATTTGGGGGGAATCAGGAGATAGGATTAGGGGGGAAAATGTAGGAATCTTCTGGCGGCACATTCTCTATGATGTGATTATTAATTAGTCCATGAAGGTGAGGATTAGGCAACTTTGCTCATCGATATTGCTCCGTGATCAAGATAGCCTAAGTTTTCTGAAAAATGCATTAAGGGCATAGCAAGTGGCTAATTCTTAAAGCATGGTTGAGAGTACAATTCAACTTCTTTTTTGTAGACAGATGTGCTTTTGTAGCCTGTTTCCTTTTGAAGGGTAGCAGAAAGTCCCGATTGTTCTTAGTGTGCTAATTTTACCTTCTAAACTTGGAAGAATGGAACATACGCAAATGATAAATGTGCTTCTTTACATCCAGGCATTCGTAATCAGTATGAAAAGGATGCAGAATACATTGACGCTACATTTTATAAATAAGGTTTTCTTTTCTAAGAGAAAGAAGGGTGCGAAGGAAAATAATGCTGCGTTCCAATCCTATTCATAATATTAGGGGAATGCTACAGGACGGTATCCCGTTCGGACAGGATGATACCTCAGAGGTATCGTCTGATACCCAGGTATGCCAATACCTAGTAGGTATTGGCGATACCTTGAGGTATCATCATGTCCAAACGGGGTATCAGCCGATACCTTAGATGATCATCCCGTCTGAACGGGAAACCGTCCCGTAGCATTTCCCTAATATTATTGTGATACGTCTTGGAACATAATGTTTGGGCAGTACATAGGGATTACTATTTAATAATATACGAATGTTGAAAAATAGTTTCATGCAAAAGTTGGAAAGGGTGTATGAAATGCTGTAATACGGAAGGAAAGGTGGTTCTTACTCCACGAACGCATTTTCTAGATATTTATATCAATAAAATTTCCTCAATCAAGGTGCTCATGTACCTGTAGATCCGTTTATTGTTGCTTCCCTTTTATTTTTCAAACAAAAGCTGATCACATATCAATTTCTAAACCAGCTAACTGTGATTTAAATTTTTGTTGAGTATTGCACAAGGGATTCCAATCACTAATGTAAATGTCTTGTATCCTTGTAATTCAAACCTATCTGATGCTTCAGAGCCCAACTAATTATGATCAAACCACTGTTTGGAGTTACTGTATATGGTTCCTTCCACATCAATGGTATTTTTGCCACTCATGGGTGTTGTATACTTTCTGGGGCTGGGAGTATTATCTCAGAAACTGTTATTGTATTGACCTGGCTGGCTGGCTATATGCCCTACTCTGTTTGATTTTATCAGCAGCTCATATTACCTTCAGCACGCTCAAATTGTTAACATCTGTGAATGTGTATTTGTTTATTGAGGTACTTAAGGATTCATTGAGCAAATTTGTTGTCCATTGGACACAAGCTTATCTTAGTGTGCTTCCAGAAAAAAAAATGTTTTGTCAATGTGAACTTTTTTTGTGAATGTTTTGAATTGTGCATTTCTGCTATGCACTGCAATGATCAAATCAAGCTGTACAGCTGCTGCTTTTGTTTGTAATTGTTTTGAAGCCCTAAGGGAATTGCTGTTGTTATTTTTTCTAGAACCATAGGTAGCAAGTAAAAACATGAAGGCAACATCATTCATACTCTTTGCTTGATAGTCATTTGGCGTATTTTGTAAAATTTGGAAACCTTTCTTTGCATGCATGACATGTCAAATTGGAGTTCCTAATTTCAGGTATCCTGTTTATGGAAGTACTTACTTTGCTTAACCTTACCATATCTGCAGGTGAAGGAACAGCTGGTATTGCCTAAGTCTTCAGTTTGGCCTATTTTTCTGTTCCAAATGAACCTACCTGTTTTTTGTTTATCCATTTGGGTGGACAACCGCTCCAGTTGTATCTAATAAGAGGCGTTTGAATCTTTGGACCAAAAAATTTGAGCTTCTGGTATAAACCTGTAATACTCTTCAAGTGCCATCCTGCTTCCTGATTTATTTTTTGTAAAAGCTTGTATCGATGGTAAGTATACATCGAAAGGGCTTTCCTGGCTGGTTGCCAAACGTTGGGCTTAGGCACGACATAGTTTCTTGGGCAAGACATTTGGTTCATTGCTGTAACTTCCGCACACTTGTCTTAGGCACGTTTCTTTTGCCAAACTTTGTCTAAGGTGAGGCGAGTAAATTGCTAGACACACCGTAGACAAGATTTGGCCGAGAAGTGTCGTGTCGAAATGAACCAAATCTGCCCGTAAAACTTGCAGCGTTTGTTCCATTCCCATTTAAAACACAGCTTTGGGTTTATTTGTTTG
CDS Sequence
- >LOC_Os03g40920.1
ATGGCGGTAGAGCTTGAATTGTTCCAGAAGGACAGCAAAGGCAGATTCCCTTGGGGGCCCACTAAAATCTGGCCCACGTGGAGGAGAGGCGAGGCCCATCTCCATGCGGCGGCGCCCCTGCCTAACCCTAAACGCGATGCGATAACCACCACCACCATCCGCTTCTTCCCCCTTCGGATCGAGAAAAAAGCGAAAGGACCTCTTGACCCCCCAACCACACCGAGGCCGCCGCGGAGGAGGAGGAAGAGGAGGAGATCGAGGATGTTTTTCAGCCGCTTCGATCCGTGGCCGGTGTTCTTCCGGAGGGAGTGGAAGCGCTGCTGGCCCTTCCTCACCGGCTTCGCCGTCACCGGCGCCATCATCACCAAGATGACCGCCGGCTTCACCGAGGAGGACCTCAAGAACTCCAAGTTCGTCCAGGCGCACAAGAAGCACTGA
Protein Sequence
- >LOC_Os03g40920.1
MAVELELFQKDSKGRFPWGPTKIWPTWRRGEAHLHAAAPLPNPKRDAITTTTIRFFPLRIEKKAKGPLDPPTTPRPPRRRRKRRRSRMFFSRFDPWPVFFRREWKRCWPFLTGFAVTGAIITKMTAGFTEEDLKNSKFVQAHKKH*