Information report for RLS3;OsPLS2
Gene Details
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Functional Descriptions
- Disruption of a Upf1-like helicase-encoding gene OsPLS2 triggers light-dependent premature leaf senescence in rice.
- Disruption of OsPLS2 accelerated light-dependent leaf senescence in the rice mutant of OsPLS2.
- This mutation prompts aberrant splicing of OsPLS2 messenger and consequent disruption of its full-length protein translation, suggesting a negative role of OsPLS2 in regulating leaf senescence.
- When continuously exposed to far-red light, exogenous H2O2 and/or abscisic acid (ABA), the OsPLS2 mutant sustained hypersensitive leaf senescence.
- In consistence, light and ROS signal pathways in OsPLS2 were activated by down-regulation of phytochrome genes, and up-regulation of PHYTOCHROME-INTERACTING FACTORS (PIFs) and WRKY genes, all promoting leaf senescence.
- Together, these data indicated that OsPLS2 played an essential role in leaf senescence and its disruption triggered light-dependent leaf senescence in rice.
- Shading and light filtration studies showed that the OsPLS2 phenotype, which was characteristic of photo-oxidative stress and reactive oxygen species (ROS) accumulation, was an effect of irritation by light.
- The OsPLS2 locus was isolated and cloned by map-based cloning that encodes a Upf1-like helicase.
- Through map-based cloning, a G-to-A substitution was determined at the 1st nucleotide of the 13th intron in the OsPLS2 gene that encodes a Upf1-like helicase.
Functional Keywords
Literature and News
Gene Resources
- UniProt: Q6F2U8
- EMBL: AK099721, AP014959, DP000009
- AlphaFoldDB: Q6F2U8
- EnsemblPlants: Os03t0586900-01
- Gramene: Os03t0586900-01
- KEGG: osa:4333346
- Orthologous matrix: TIIHGPP
- InterPro: IPR003593, IPR004483, IPR014001
- PANTHER: PTHR43788, PTHR43788:SF8
- SUPFAM: SSF52540
- Gene3D: 2.40.30.270, 3.40.50.300
- OrthoDB: Q6F2U8
- SWISS-MODEL: Q6F2U8
- Conserved Domain Database: cd18044, cd18808
- eggNOG: KOG1803
Sequences
cDNA Sequence
- >LOC_Os03g38990.1
GATTACGCCGTGGACGAGACGAGTGAGAGGAGGAGAGCGGCCATGGCGGGGCGGAGTGGCGGCGGCGGCGGCGGGAGCTCCGGGAAGAGCGGGACGGGGAGGATGGTGTCGCTGCAGGAGTTCGTCTCGTCCATGGCGCCTCTCATAGACCTGGAGAAGGCGGCGGAGATATCGGCGGAGTCGGCGACGAGCTCGAAGACCCTCGAGAGGAGGGGTTGCGTCATGGCCAACCTCAAGTGCACCGACGCCCAGACGGGGCTGATGGGGAAGACGCTCCTGGAGTTCCAACCCAACAAGGGCGACGTGCTTCCACCTCACAAGTTTGGAACACACGATGTGGTTGCTCTGAAGCCAAATAAGGCAGATGCTGGATCTGCTGCTCTTGGGCAAGGTGTAGTTTATCGCTTGAAGGATTCTTCCATTACTGTTGCCTTTGATGACATTCCTGAAGATGGATTAAATAGCCCTCTCCGCCTTGAAAAGCTTGCAAATGAGGTGACATACCGCAGGATGAAGGATGCACTAGTTCAACTTAGTAAGGGCATTCAAACAGGCCCTTCAGCAAACCTTATTCCTGTTTTGTTTGGAGAAAACCCACCTATGAGTTCCAAGGATGTTGCGAAGTTCAGTCCATTTAACAAGAATTTGGATGAGTCACAGAAAGATGCTATCTCGAAGGCCCTCAGGTCAAGGGATGTTTTCTTGCTTCATGGACCTCCTGGCACTGGGAAGACAACAACTATCATTGAGATAATATTGCAGGAGGTGAAACGTGGATCAAAGATTCTTGCTTGTGCTGCTTCTAACATCGCCGTGGATAACATTGTTGAGCGACTCTCCCGATATAGAACCAAATTGGTGAGGTTAGGCCATCCTGCTCGATTACTACCCCAAGTGTTGGACAGTGCTCTTGACGCACAGGTATTGCGAGCAGATAACAGCAGCTTAGCAGGAGATATTCGCAAAGAAATGAAGGTGCTTAATAGCAAATTGCTGAAAGCTAAGGATAAGAATACAAAAAGGGACATCAGGAAAGAGCTCAGAACCCTTGCCAAAGAAGAGAGAAAACGACAACAGCTTGCTGTTGCTGATGTGATAAAAAATGCAGATGTTGTACTGTCGACTTTGACTGGTGCATCTTCCAAAAAGCTAGATGGTATTACATTTGATTTGGTCATTATTGATGAAGCTGCTCAGGCACTTGAGATGGCATGTTGGATAGCCTTATTGAAGGGTCCAAGATGTGTGCTTGCTGGAGACCATCTTCAACTTCCTCCGACTATCCAAAGTGCTGAGGCTGAGAAGAAGGGGATGGGAAAGACACTCTTTGAACGCCTTACTGAAGCTTATGGAGATCAAATTACATCCATGCTCACTATCCAGTACAGAATGCATGAGCTCATAATGAATTGGTCATCTAAAGAACTTTATAATAACAAGATCAAAGCTCATTCTAGTGTTGCTGATCATATGCTCTATGACATTGAAGAAGTGAAAAGATCTTCTTCCACAGAGCCGACTATCATACTAATTGACACTACTGGGTGTGACATGGAAGAAGTAAAAGATGAGGAGGAGAGCACTATGAATGAGGGTGAGGCTGCAGTATCCATTGCTCATGCCAAGCTGCTTGTTGAGAGTGGTGTCCGTGCATCTGATATTGGAATAATTACACCTTATGCTGCACAGGTAACCTGTCTGAAGATGATGAGAAACAAAGATACTAAACTGAAGGACTTGGAGATATCGACAGTTGATGGGTTCCAGGGTAGGGAGAAAGAAGCCATCATCATTTCAATGGTCAGATCCAACTCAAAGAAAGAGGTCGGATTCTTAAGTGATCATAGACGAATGAATGTTGCTGTAACACGAGCCAGAAGGCAGTGCTGCCTAGTGTGCGATGTAGAGACCGTAAGCAACGACAAATTCTTGAAACGCTTGGTTGAGTACTTTGAGGAGAACGGGGAGTACTTGAGTGCATCAGAATACCAGAGCTGATGACTTGGGGTGTTAACCCTTAACCGTGATAGCCCGTGCTTATCGCAAAGATAGTGAAGAGATATATCCAAACGATGCTTGTGATAGGAACATCGTGCACTTCAAACTGGTGCAATATGGCCAATGGAGATACTGTCATTCGACTTTTATAGATTGGAAACAGATCGCTGTGAGACTGAACAGATAATTAGCTCAGGAGTGGATCAATTTCGTCTTGACTGGCCCTGTTCTGGTCTCTTCTTCTGTGGCTTATGGAAATGAAACCTCAGTTATGTGTTTTTATATGTCCGTTCTTTCAGCTGATGTACAATGATAGAAGACTAATTTTATTCATCCATGTGCAAATCTACCATAGTTTTTTGCATGGAGTTTTGAAACTTGGGTCCACAAAAATAGTAATAATAGGATAGGAGGTTGACTGTACTGAACTTCGCATGATAATTAATCTGTATCTCATCCATCTTGCTTATTTTCACAATGTCGCCCAAAATACCAAA
CDS Sequence
- >LOC_Os03g38990.1
ATGGCGGGGCGGAGTGGCGGCGGCGGCGGCGGGAGCTCCGGGAAGAGCGGGACGGGGAGGATGGTGTCGCTGCAGGAGTTCGTCTCGTCCATGGCGCCTCTCATAGACCTGGAGAAGGCGGCGGAGATATCGGCGGAGTCGGCGACGAGCTCGAAGACCCTCGAGAGGAGGGGTTGCGTCATGGCCAACCTCAAGTGCACCGACGCCCAGACGGGGCTGATGGGGAAGACGCTCCTGGAGTTCCAACCCAACAAGGGCGACGTGCTTCCACCTCACAAGTTTGGAACACACGATGTGGTTGCTCTGAAGCCAAATAAGGCAGATGCTGGATCTGCTGCTCTTGGGCAAGGTGTAGTTTATCGCTTGAAGGATTCTTCCATTACTGTTGCCTTTGATGACATTCCTGAAGATGGATTAAATAGCCCTCTCCGCCTTGAAAAGCTTGCAAATGAGGTGACATACCGCAGGATGAAGGATGCACTAGTTCAACTTAGTAAGGGCATTCAAACAGGCCCTTCAGCAAACCTTATTCCTGTTTTGTTTGGAGAAAACCCACCTATGAGTTCCAAGGATGTTGCGAAGTTCAGTCCATTTAACAAGAATTTGGATGAGTCACAGAAAGATGCTATCTCGAAGGCCCTCAGGTCAAGGGATGTTTTCTTGCTTCATGGACCTCCTGGCACTGGGAAGACAACAACTATCATTGAGATAATATTGCAGGAGGTGAAACGTGGATCAAAGATTCTTGCTTGTGCTGCTTCTAACATCGCCGTGGATAACATTGTTGAGCGACTCTCCCGATATAGAACCAAATTGGTGAGGTTAGGCCATCCTGCTCGATTACTACCCCAAGTGTTGGACAGTGCTCTTGACGCACAGGTATTGCGAGCAGATAACAGCAGCTTAGCAGGAGATATTCGCAAAGAAATGAAGGTGCTTAATAGCAAATTGCTGAAAGCTAAGGATAAGAATACAAAAAGGGACATCAGGAAAGAGCTCAGAACCCTTGCCAAAGAAGAGAGAAAACGACAACAGCTTGCTGTTGCTGATGTGATAAAAAATGCAGATGTTGTACTGTCGACTTTGACTGGTGCATCTTCCAAAAAGCTAGATGGTATTACATTTGATTTGGTCATTATTGATGAAGCTGCTCAGGCACTTGAGATGGCATGTTGGATAGCCTTATTGAAGGGTCCAAGATGTGTGCTTGCTGGAGACCATCTTCAACTTCCTCCGACTATCCAAAGTGCTGAGGCTGAGAAGAAGGGGATGGGAAAGACACTCTTTGAACGCCTTACTGAAGCTTATGGAGATCAAATTACATCCATGCTCACTATCCAGTACAGAATGCATGAGCTCATAATGAATTGGTCATCTAAAGAACTTTATAATAACAAGATCAAAGCTCATTCTAGTGTTGCTGATCATATGCTCTATGACATTGAAGAAGTGAAAAGATCTTCTTCCACAGAGCCGACTATCATACTAATTGACACTACTGGGTGTGACATGGAAGAAGTAAAAGATGAGGAGGAGAGCACTATGAATGAGGGTGAGGCTGCAGTATCCATTGCTCATGCCAAGCTGCTTGTTGAGAGTGGTGTCCGTGCATCTGATATTGGAATAATTACACCTTATGCTGCACAGGTAACCTGTCTGAAGATGATGAGAAACAAAGATACTAAACTGAAGGACTTGGAGATATCGACAGTTGATGGGTTCCAGGGTAGGGAGAAAGAAGCCATCATCATTTCAATGGTCAGATCCAACTCAAAGAAAGAGGTCGGATTCTTAAGTGATCATAGACGAATGAATGTTGCTGTAACACGAGCCAGAAGGCAGTGCTGCCTAGTGTGCGATGTAGAGACCGTAAGCAACGACAAATTCTTGAAACGCTTGGTTGAGTACTTTGAGGAGAACGGGGAGTACTTGAGTGCATCAGAATACCAGAGCTGA
Protein Sequence
- >LOC_Os03g38990.1
MAGRSGGGGGGSSGKSGTGRMVSLQEFVSSMAPLIDLEKAAEISAESATSSKTLERRGCVMANLKCTDAQTGLMGKTLLEFQPNKGDVLPPHKFGTHDVVALKPNKADAGSAALGQGVVYRLKDSSITVAFDDIPEDGLNSPLRLEKLANEVTYRRMKDALVQLSKGIQTGPSANLIPVLFGENPPMSSKDVAKFSPFNKNLDESQKDAISKALRSRDVFLLHGPPGTGKTTTIIEIILQEVKRGSKILACAASNIAVDNIVERLSRYRTKLVRLGHPARLLPQVLDSALDAQVLRADNSSLAGDIRKEMKVLNSKLLKAKDKNTKRDIRKELRTLAKEERKRQQLAVADVIKNADVVLSTLTGASSKKLDGITFDLVIIDEAAQALEMACWIALLKGPRCVLAGDHLQLPPTIQSAEAEKKGMGKTLFERLTEAYGDQITSMLTIQYRMHELIMNWSSKELYNNKIKAHSSVADHMLYDIEEVKRSSSTEPTIILIDTTGCDMEEVKDEEESTMNEGEAAVSIAHAKLLVESGVRASDIGIITPYAAQVTCLKMMRNKDTKLKDLEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDHRRMNVAVTRARRQCCLVCDVETVSNDKFLKRLVEYFEENGEYLSASEYQS*