Information report for GL3.2
Gene Details
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Functional Descriptions
- Sequence search revealed that CYP78A13 has a paralogue Grain<U+2005>Length 3.2 (GL3.2, LOC_Os03g30420) in rice with distinct expression patterns, analysis of transgenic plants harbouring either CYP78A13 or GL3.2 showed that both can promote grain growth.
- Both CYP78A13 and GL3.2 promote seed growth in rice.
- It was predicted that CYP78A13 was associated with grain width, while another P450 paralogue located on chromosome 3, LOC_Os03g30420, which we named Grain Length3.2 (GL3.2), was associated with grain length.
- Overexpression of CYP78A13 and GL3.2 both resulted in enlarged grain sizes.
Functional Keywords
Literature and News
Gene Resources
- UniProt: Q7Y1K4
- EMBL: AP014959
- AlphaFoldDB: Q7Y1K4
- EnsemblPlants: Os03t0417700-01
- Gramene: Os03t0417700-01
- KEGG: osa:4333118
- Orthologous matrix: CDSDLPN
- InterPro: IPR001128, IPR002401, IPR007110
- PANTHER: PTHR47946, PTHR47946:SF18
- SUPFAM: SSF48264
- PROSITE: PS00086, PS50835
- Gene3D: 1.10.630.10
- OrthoDB: Q7Y1K4
- SWISS-MODEL: Q7Y1K4
- eggNOG: KOG0156
Homologs
- Gossypium hirsutum: Gohir.D13G083200, Gohir.A13G083300, Gohir.D02G130000
- Musa acuminata: Ma06_g36880, Ma05_g08620, Ma09_g27340, Ma04_g24280
- Saccharum spontaneum: Sspon.01G0040520-1B
- Setaria italica: SETIT_035169mg
- Setaria viridis: SEVIR_9G368000v2
- Triticum aestivum: TaCYP78A5-2B, TaCYP78A5-2A, TaCYP78A5-2D
- Vitis vinifera: VIT_01s0011g00350
Sequences
cDNA Sequence
- >LOC_Os03g30420.1
GCACCCTCCTGCCTCCCCCCAACATTCTCACACGCCATGGATGCCACTCTCGGCGCCTCCACTACCCATGGCTACCTCCTCCTCCTCCCGGCCAACTCCACCACCTTCTTCTCCCCGCTCCTCGCTGCCCTCCTCGCCGTCACCTCGCTGCTCTGGCTCGTCCCGGGCGGCCCCGCGTGGGCGCTCTCCCGCTGCCGCCGGCCCCCGCCCGGCGCGCCGGGCGCGCTCGCCGCGCTCGCCGGCCCCGCCGCGCACCGCGCGCTCGCGGCCATGTCGAGGTCCGTGCCTGGCGGCGCCGCCCTGGCGTCCTTCTCCGTCGGCCTCACGCGTTTCGTCGTGGCCAGCCGCCCCGACACGGCGCGGGAGCTCCTGTCCAGCGCCGCGTTCGCCGACCGCCCCGTGAAGGACGCGGCGCGGGGTTTGCTCTTCCACCGCGCCATGGGGTTCGCGCCCTCCGGCGACTACTGGCGCGCGCTCCGCCGCGTCAGCGCCAACCACCTCTTCACCCCTCGCCGCGTCGCCGCCTCGGCCCCGCGACGCCTCGCCATCGGCGAGCGCATGCTAGACCGCCTGTCCGCCCTCGCCGGCGGCGAGATCGGCATGAGGCGCGTGCTCCACGCGGCGTCCCTGGACCACGTCATGGACACCGTCTTCGGGACGCGCTACGACGGCGACAGCCAGGAGGGCGCCGAGCTCGAGGCCATGGTGAAGGAAGGGTACGACCTCCTCGGGATGTTCAACTGGGGAGACCACCTGCCGCTGCTCAAATGGCTCGACCTGCAAGGCGTGAGGAGGAGGTGCAGGACGCTGGTGCAACGAGTCGACGTGTTCGTCCGAAGCATCATCGACGAGCACAGGCAGAGGAAGCGCCGCACCGGCGGCAATGGCGGAGGCGAGGAGCTCCCCGGCGACTTCGTCGACGTGTTGCTCGGGTTGCAGGGGGAGGAGAAGATGACGGAGTCCGACATGGTCGCCGTTCTCTGGGAGATGATCTTTCGGGGGACGGACACGGTGGCGATTCTGCTGGAATGGATCATGGCGAGGATGGTGCTGCACCCGGACATCCAGGCGAAGGCGCAGGCGGAGCTCGACGCCGTCGTCGGCCGCGGGCGCGCCGTGTCGGACGGCGACGTCGCCGGCCTGCGCTACCTCCAGTGCGTCGTGAAGGAGGCGCTCCGCGTGCACCCGCCGGGCCCGCTCCTGTCGTGGGCGCGCCTCGCCGTGCGCGACGCGCACGTCGGCGGCCACGTGGTCCCCGCGGGCACCACGGCCATGGTCAACATGTGGGCCATCGCGCACGACCCGGAGCTCTGGCCGGAGCCCGACGAGTTCCGGCCGGAGCGGTTCGCGGAGGAGGACGTCAGCGTGCTCGGCGGCGACCTCCGCCTCGCGCCGTTCGGCGCGGGGCGGCGCGCCTGCCCGGGCAAGACGCTCGCGCTCGCCACCGTCCACCTCTGGCTCGCGCAGCTGCTGCACCGCTTCGAGTGGGCACCGGTCGGCGGCGGCGTCCACTTGTTGGAGCGCCTGAACATGTCGCTGGAGATGGAGAAGCCTCTCGTGTGCAAGGCTAAACCTAGGTGGTGATGATCAAGGAGTATGGGGCTGTTTGGTTGGTTGCTGCCCTGAGTAACATAACATGCCTGAAATTTCTGTGCGCCTGAGTGGCATGTGAGAAGACCAATGCATCTAACCTGGTCAGGCAGCTTGAGTATATGCTTGTTTGGTTGGTTGTTGCTGCCTGAGAAACAAATATGCAATTACGCCTTTAATC
CDS Sequence
- >LOC_Os03g30420.1
ATGGATGCCACTCTCGGCGCCTCCACTACCCATGGCTACCTCCTCCTCCTCCCGGCCAACTCCACCACCTTCTTCTCCCCGCTCCTCGCTGCCCTCCTCGCCGTCACCTCGCTGCTCTGGCTCGTCCCGGGCGGCCCCGCGTGGGCGCTCTCCCGCTGCCGCCGGCCCCCGCCCGGCGCGCCGGGCGCGCTCGCCGCGCTCGCCGGCCCCGCCGCGCACCGCGCGCTCGCGGCCATGTCGAGGTCCGTGCCTGGCGGCGCCGCCCTGGCGTCCTTCTCCGTCGGCCTCACGCGTTTCGTCGTGGCCAGCCGCCCCGACACGGCGCGGGAGCTCCTGTCCAGCGCCGCGTTCGCCGACCGCCCCGTGAAGGACGCGGCGCGGGGTTTGCTCTTCCACCGCGCCATGGGGTTCGCGCCCTCCGGCGACTACTGGCGCGCGCTCCGCCGCGTCAGCGCCAACCACCTCTTCACCCCTCGCCGCGTCGCCGCCTCGGCCCCGCGACGCCTCGCCATCGGCGAGCGCATGCTAGACCGCCTGTCCGCCCTCGCCGGCGGCGAGATCGGCATGAGGCGCGTGCTCCACGCGGCGTCCCTGGACCACGTCATGGACACCGTCTTCGGGACGCGCTACGACGGCGACAGCCAGGAGGGCGCCGAGCTCGAGGCCATGGTGAAGGAAGGGTACGACCTCCTCGGGATGTTCAACTGGGGAGACCACCTGCCGCTGCTCAAATGGCTCGACCTGCAAGGCGTGAGGAGGAGGTGCAGGACGCTGGTGCAACGAGTCGACGTGTTCGTCCGAAGCATCATCGACGAGCACAGGCAGAGGAAGCGCCGCACCGGCGGCAATGGCGGAGGCGAGGAGCTCCCCGGCGACTTCGTCGACGTGTTGCTCGGGTTGCAGGGGGAGGAGAAGATGACGGAGTCCGACATGGTCGCCGTTCTCTGGGAGATGATCTTTCGGGGGACGGACACGGTGGCGATTCTGCTGGAATGGATCATGGCGAGGATGGTGCTGCACCCGGACATCCAGGCGAAGGCGCAGGCGGAGCTCGACGCCGTCGTCGGCCGCGGGCGCGCCGTGTCGGACGGCGACGTCGCCGGCCTGCGCTACCTCCAGTGCGTCGTGAAGGAGGCGCTCCGCGTGCACCCGCCGGGCCCGCTCCTGTCGTGGGCGCGCCTCGCCGTGCGCGACGCGCACGTCGGCGGCCACGTGGTCCCCGCGGGCACCACGGCCATGGTCAACATGTGGGCCATCGCGCACGACCCGGAGCTCTGGCCGGAGCCCGACGAGTTCCGGCCGGAGCGGTTCGCGGAGGAGGACGTCAGCGTGCTCGGCGGCGACCTCCGCCTCGCGCCGTTCGGCGCGGGGCGGCGCGCCTGCCCGGGCAAGACGCTCGCGCTCGCCACCGTCCACCTCTGGCTCGCGCAGCTGCTGCACCGCTTCGAGTGGGCACCGGTCGGCGGCGGCGTCCACTTGTTGGAGCGCCTGAACATGTCGCTGGAGATGGAGAAGCCTCTCGTGTGCAAGGCTAAACCTAGGTGGTGA
Protein Sequence
- >LOC_Os03g30420.1
MDATLGASTTHGYLLLLPANSTTFFSPLLAALLAVTSLLWLVPGGPAWALSRCRRPPPGAPGALAALAGPAAHRALAAMSRSVPGGAALASFSVGLTRFVVASRPDTARELLSSAAFADRPVKDAARGLLFHRAMGFAPSGDYWRALRRVSANHLFTPRRVAASAPRRLAIGERMLDRLSALAGGEIGMRRVLHAASLDHVMDTVFGTRYDGDSQEGAELEAMVKEGYDLLGMFNWGDHLPLLKWLDLQGVRRRCRTLVQRVDVFVRSIIDEHRQRKRRTGGNGGGEELPGDFVDVLLGLQGEEKMTESDMVAVLWEMIFRGTDTVAILLEWIMARMVLHPDIQAKAQAELDAVVGRGRAVSDGDVAGLRYLQCVVKEALRVHPPGPLLSWARLAVRDAHVGGHVVPAGTTAMVNMWAIAHDPELWPEPDEFRPERFAEEDVSVLGGDLRLAPFGAGRRACPGKTLALATVHLWLAQLLHRFEWAPVGGGVHLLERLNMSLEMEKPLVCKAKPRW*