Gene Details:
- MSU gene ID: LOC_Os03g27390
- RAPdb gene ID: Os03g0391700
- Gene Symbol: OsbHLH138
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- The transcription factor OsbHLH138 regulates thermosensitive genic male sterility in rice via activation of TMS5.
- The identification of OsbHLH138 provides breeders a new choice for development of TGMS rice lines, which will favor the sustainable development of two-line hybrid rice.
Function-related keywords:
Literature:
- The transcription factor OsbHLH138 regulates thermosensitive genic male sterility in rice via activation of TMS5 . DOI: 10.1007/s00122-019-03310-7 ; PMID: 30778635
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os03g27390.2
GCACGCGGCGCCGCAGGGGCATTTCCGTCCGAGGGGGCCGATAAGAGAAGCCGCGCCGCGGCGCACGCTCTCGCTGTCTCTCTCTCTCTCTCTCTCTCTCGTCCTCGTCTCGGTCTCGCCGTGCGGCTCTCTCTCGTGAGCAACAGCACGCGCCGCGGTCGGCCTCCCCTTCAATTCCTTCGGCTTTGGCCCGGGCGGGTGTGTGAGTGCTCAGCTCCTATCGCCGATTCGTCGTCCTCCTCCTCCTCATCCTGCTCGATCTGGTAATTCTAGTGTTGAGGGTCTGAGGAGCTGAAACTAGCACGGGTACCCTGGCAGCATGCGGTGGCTGGCTCTCTCGGTAGACATCTTCCGCAAAGGGATCTCCTTGAACCTGTACTGCCGGGTTATTCTGTAAATTGCCTCCATTATTGCTCTACTCCAATCCTGATCTTCTAGTCTCTGAAGTTTGGGATTGAAGATCTGGTTGCTGGCATTGCTGTTTGGGTTTCTGTGGTTGCCTGGCAATTCTTTCAAGGAGAACGGGCAGGAGTACTAATGGTGTGGCAACCGGTGGCTCAGACGAGATTCCGCGTGTTTAAACATGAGAATGGAATCGCTGTGAGAGTTATAGCTTGCTTCCAGCCATCCCAAGATTGCCAGGCCGAGTACTTCCGCCATCTTCTTAAGCCCGTGACGTAGTTCGACTCCCTCCCTTCCATTTGCTGTTGAATAGAACCTGTGCTGCTCTAAGTTTTTCTGAAGCAAAAGTAAAGCAGGAGAATTTCCTGTTCATCTCAATTTTCTGGTGAAGATCCTGTTTGCTGGTTGTTTCTTGATGGGGGAGAAGGTTAATCCCTGGTGCCATTGGTCTAATCCCCCATGGACCGAGAGCTCTGCAAACAATCTCCACCCACCCGATGTTAGCCTCGACAACACAAATTCAGTGGCGTTGCCAACATATCTGAACAGCGATGGCTACATTTATTCTGGAGTTGCTGCATCTATGCCGTCTATTGCAGCATCAGTTACTGACAGACCTGTTTCATTCTCTTCTAGATTTGTCACAACATTGGTACCCAGTGTAGGCTTATCAACAGCTGAGACACTGAGAAAGAGACCTCTGGTTTTCTTTCATAATGTGAATAATACCTTCACTGTAGGTCCTCTCCTGAGCAAGGGGACATTGGATACAGTTCCAGAGCTCCAAGGTAGCAATGAGACCAATGTAACTGATGTTGGAGCACAAAATACTGAGTGTATGCATGAGAATACTGAGGAGATTGATGCACTCCTGTGTTCCGACTCAGATGAAGGGTGCTTGAAAGTGCAAGAACTCAACAACAGAGTCAGGAAATACCCAATGCAGAATGACACCATGAGTGTGGAGTCGGTAGCAAGCGCTGGTGCTTCCCAACCAGCAAAGAAAAGAAGACTAAGCTCTGGTACCGACAGATCTGTGGTTGACACAGCCAGCTCAGCAAGGCCTGACCACTCCGTTGATCAGAAACATCTCAGCCATGACGACGACGCACAGTCGTGTTGTATTGGTGAAGTGGAAAGCGATCACCAGTTTGCTCTGAGGGAAGGTGAAGAAGCAGAAGGTGATGATGGCCCCGATGATCGGAAGCGGAGAAGAGAGAGGATCCAAGAGACTGTTGCTGCACTCAGAAAGATAGTTCCTGGAGGCATTGCCAAAGATGCCACAGCCGTTCTTGATGAAGCGATATGCTATCTCAAGTATCTAAAGCTCAAGGTCAAGACACTGGGAGCTGTTTCCCTCTAGCTCCTCGATCGATGACGGTTCTGTTCTGGTTCCTGAACCCAATACCTATCCCTCTCTCCATATATACAAGTAATGAGCTAAAACTATAGCAGCAATAAGGTGAAATGAAACTCAGTCAGTTCCATTCGGTGATTCTGAGGACTACTGGAGTGAAAGCTCAATGGTGCTTTGCTTACAAGGGTCCAATGATTTGAGTGGTTACAATGAAGATTCAGTATTGCAGTATATTACTAGTGAATCACCGACCACTGCACCTTCATCCATCCATCCACTGATGGAGAGTACTACCTAGCAGCAAGCCGGTGTCACATCTTTCTTCTGGGTCAGTTCAGTGCAGTGCCTCTTGGTAGGCACCTCCTCCCTCTCATAAAAAAAGGCTCTCATGGCGTTGATGGCGCAATAAGTAAAACAGGGAGGCTAAGCTATAAAGATCTTTTTTCTCCCCTCCATTGTGGTGTGATCCAAAGCAAAGGAAGGAAGGAGGAATGAATGAATGAAGTCCATGCAAAGTGCAGTGCTGGTGGCCTGGTGCTGCATGCGTCGATGGCTTTTTGACCCCCAAAGGTTGAGAGATGAGATGGCGGGGCCGCGCCCGAGGTTAGTTCGGGCTCCTTGTGTGTGTTTGTATGGTGGCGTGTGTAGCTAGCAGAGTGTGCGTGATGGCGTCGTCCCTCGCGCTTTTTCTGCCTTTCTACTAGTACTATACATATATGCTACTGTATACTGTACTCCTATGTATGAATACTGCATGTGTTTGTGTTTGTGTTTGATCCCCCGCTACTTTAAACTCTTTTTACGCGTTGTGATGATACCTGT - >LOC_Os03g27390.1
GCACGCGGCGCCGCAGGGGCATTTCCGTCCGAGGGGGCCGATAAGAGAAGCCGCGCCGCGGCGCACGCTCTCGCTGTCTCTCTCTCTCTCTCTCTCTCTCGTCCTCGTCTCGGTCTCGCCGTGCGGCTCTCTCTCGTGAGCAACAGCACGCGCCGCGGTCGGCCTCCCCTTCAATTCCTTCGGCTTTGGCCCGGGCGGGTGTGTGAGTGCTCAGCTCCTATCGCCGATTCGTCGTCCTCCTCCTCCTCATCCTGCTCGATCTGGTAATTCTAGTGTTGAGGGTCTGAGGAGCTGAAACTAGCACGGGTACCCTGGCAGCATGCGGTGGCTGGCTCTCTCGGTAGACATCTTCCGCAAAGGGATCTCCTTGAACCTGTACTGCCGGGTTATTCTGTAAATTGCCTCCATTATTGCTCTACTCCAATCCTGATCTTCTAGTCTCTGAAGTTTGGGATTGAAGATCTGGTTGCTGGCATTGCTGTTTGGGTTTCTGTGGTTGCCTGGCAATTCTTTCAAGGAGAACGGGCAGGAGTACTAATGGTGTGGCAACCGGTGGCTCAGACGAGATTCCGCGTGTTTAAACATGAGAATGGAATCGCTGTGAGAGTTATAGCTTGCTTCCAGCCATCCCAAGATTGCCAGGCCGAGTACTTCCGCCATCTTCTTAAGCCCGTGACGTAGTTCGACTCCCTCCCTTCCATTTGCTGTTGAATAGAACCTGTGCTGCTCTAAGTTTTTCTGAAGCAAAAGTAAAGCAGGAGAATTTCCTGTTCATCTCAATTTTCTGGTGAAGATCCTGTTTGCTGGTTGTTTCTTGATGGGGGAGAAGGTTAATCCCTGGTGCCATTGGTCTAATCCCCCATGGACCGAGAGCTCTGCAAACAATCTCCACCCACCCGATGTTAGCCTCGACAACACAAATTCAGTGGCGTTGCCAACATATCTGAACAGCGATGGCTACATTTATTCTGGAGTTGCTGCATCTATGCCGTCTATTGCAGCATCAGTTACTGACAGACCTGTTTCATTCTCTTCTAGATTTGTCACAACATTGGTACCCAGTGTAGGCTTATCAACAGCTGAGACACTGAGAAAGAGACCTCTGGTTTTCTTTCATAATGTGAATAATACCTTCACTGTAGGTCCTCTCCTGAGCAAGGGGACATTGGATACAGTTCCAGAGCTCCAAGGTAGCAATGAGACCAATGTAACTGATGTTGGAGCACAAAATACTGAGTGTATGCATGAGAATACTGAGGAGATTGATGCACTCCTGTGTTCCGACTCAGATGAAGGGTGCTTGAAAGTGCAAGAACTCAACAACAGAGTCAGGAAATACCCAATGCAGAATGACACCATGAGTGTGGAGTCGGTAGCAAGCGCTGGTGCTTCCCAACCAGCAAAGAAAAGAAGACTAAGCTCTGGTACCGACAGATCTGTGGTTGACACAGCCAGCTCAGCAAGGCCTGACCACTCCGTTGATCAGAAACATCTCAGCCATGACGACGACGCACAGTCGTGTTGTATTGGTGAAGTGGAAAGCGATCACCAGTTTGCTCTGAGGGAAGGTGAAGAAGCAGAAGGTGATGATGGCCCCGATGATCGGAAGCGGAGAAGAGAGAGGATCCAAGAGACTGTTGCTGCACTCAGAAAGATAGTTCCTGGAGGCATTGCCAAAGATGCCACAGCCGTTCTTGATGAAGCGATATGCTATCTCAAGTATCTAAAGCTCAAGGTCAAGACACTGGGAGCTGTTTCCCTCTAGCTCCTCGATCGATGACGGTTCTGTTCTGGTTCCTGAACCCAATACCTATCCCTCTCTCCATATATACAAGTAATGAGCTAAAACTATAGCAGCAATAAGGTGAAATGAAACTCAGTCAGTTCCATTCGGTGATTCTGAGGACTACTGGAGTGAAAGCTCAATGGTGCTTTGCTTACAAGGGTCCAATGATTTGAGTGGTTACAATGAAGATTCAGTATTGCAGTATATTACTAGTGAATCACCGACCACTGCACCTTCATCCATCCATCCACTGATGGAGAGTACTACCTAGCAGCAAGCCGGTGTCACATCTTTCTTCTGGGTCAGTTCAGTGCAGTGCCTCTTGGTAGGCACCTCCTCCCTCTCATAAAAAAAGGCTCTCATGGCGTTGATGGCGCAATAAGTAAAACAGGGAGGCTAAGCTATAAAGATCTTTTTTCTCCCCTCCATTGTGGTGTGATCCAAAGCAAAGGAAGGAAGGAGGAATGAATGAATGAAGTCCATGCAAAGTGCAGTGCTGGTGGCCTGGTGCTGCATGCGTCGATGGCTTTTTGACCCCCAAAGGTTGAGAGATGAGATGGCGGGGCCGCGCCCGAGGTTAGTTCGGGCTCCTTGTGTGTGTTTGTATGGTGGCGTGTGTAGCTAGCAGAGTGTGCGTGATGGCGTCGTCCCTCGCGCTTTTTCTGCCTTTCTACTAGTACTATACATATATGCTACTGTATACTGTACTCCTATGTATGAATACTGCATGTGTTTGTGTTTGTGTTTGATCCCCCGCTACTTTAAACTCTTTTTACGCGTTGTGATGATACCTGT
CDS Sequence
- >LOC_Os03g27390.2
ATGGGGGAGAAGGTTAATCCCTGGTGCCATTGGTCTAATCCCCCATGGACCGAGAGCTCTGCAAACAATCTCCACCCACCCGATGTTAGCCTCGACAACACAAATTCAGTGGCGTTGCCAACATATCTGAACAGCGATGGCTACATTTATTCTGGAGTTGCTGCATCTATGCCGTCTATTGCAGCATCAGTTACTGACAGACCTGTTTCATTCTCTTCTAGATTTGTCACAACATTGGTACCCAGTGTAGGCTTATCAACAGCTGAGACACTGAGAAAGAGACCTCTGGTTTTCTTTCATAATGTGAATAATACCTTCACTGTAGGTCCTCTCCTGAGCAAGGGGACATTGGATACAGTTCCAGAGCTCCAAGGTAGCAATGAGACCAATGTAACTGATGTTGGAGCACAAAATACTGAGTGTATGCATGAGAATACTGAGGAGATTGATGCACTCCTGTGTTCCGACTCAGATGAAGGGTGCTTGAAAGTGCAAGAACTCAACAACAGAGTCAGGAAATACCCAATGCAGAATGACACCATGAGTGTGGAGTCGGTAGCAAGCGCTGGTGCTTCCCAACCAGCAAAGAAAAGAAGACTAAGCTCTGGTACCGACAGATCTGTGGTTGACACAGCCAGCTCAGCAAGGCCTGACCACTCCGTTGATCAGAAACATCTCAGCCATGACGACGACGCACAGTCGTGTTGTATTGGTGAAGTGGAAAGCGATCACCAGTTTGCTCTGAGGGAAGGTGAAGAAGCAGAAGGTGATGATGGCCCCGATGATCGGAAGCGGAGAAGAGAGAGGATCCAAGAGACTGTTGCTGCACTCAGAAAGATAGTTCCTGGAGGCATTGCCAAAGATGCCACAGCCGTTCTTGATGAAGCGATATGCTATCTCAAGTATCTAAAGCTCAAGGTCAAGACACTGGGAGCTGTTTCCCTCTAG - >LOC_Os03g27390.1
ATGGGGGAGAAGGTTAATCCCTGGTGCCATTGGTCTAATCCCCCATGGACCGAGAGCTCTGCAAACAATCTCCACCCACCCGATGTTAGCCTCGACAACACAAATTCAGTGGCGTTGCCAACATATCTGAACAGCGATGGCTACATTTATTCTGGAGTTGCTGCATCTATGCCGTCTATTGCAGCATCAGTTACTGACAGACCTGTTTCATTCTCTTCTAGATTTGTCACAACATTGGTACCCAGTGTAGGCTTATCAACAGCTGAGACACTGAGAAAGAGACCTCTGGTTTTCTTTCATAATGTGAATAATACCTTCACTGTAGGTCCTCTCCTGAGCAAGGGGACATTGGATACAGTTCCAGAGCTCCAAGGTAGCAATGAGACCAATGTAACTGATGTTGGAGCACAAAATACTGAGTGTATGCATGAGAATACTGAGGAGATTGATGCACTCCTGTGTTCCGACTCAGATGAAGGGTGCTTGAAAGTGCAAGAACTCAACAACAGAGTCAGGAAATACCCAATGCAGAATGACACCATGAGTGTGGAGTCGGTAGCAAGCGCTGGTGCTTCCCAACCAGCAAAGAAAAGAAGACTAAGCTCTGGTACCGACAGATCTGTGGTTGACACAGCCAGCTCAGCAAGGCCTGACCACTCCGTTGATCAGAAACATCTCAGCCATGACGACGACGCACAGTCGTGTTGTATTGGTGAAGTGGAAAGCGATCACCAGTTTGCTCTGAGGGAAGGTGAAGAAGCAGAAGGTGATGATGGCCCCGATGATCGGAAGCGGAGAAGAGAGAGGATCCAAGAGACTGTTGCTGCACTCAGAAAGATAGTTCCTGGAGGCATTGCCAAAGATGCCACAGCCGTTCTTGATGAAGCGATATGCTATCTCAAGTATCTAAAGCTCAAGGTCAAGACACTGGGAGCTGTTTCCCTCTAG
Protein Sequence
- >LOC_Os03g27390.2
MGEKVNPWCHWSNPPWTESSANNLHPPDVSLDNTNSVALPTYLNSDGYIYSGVAASMPSIAASVTDRPVSFSSRFVTTLVPSVGLSTAETLRKRPLVFFHNVNNTFTVGPLLSKGTLDTVPELQGSNETNVTDVGAQNTECMHENTEEIDALLCSDSDEGCLKVQELNNRVRKYPMQNDTMSVESVASAGASQPAKKRRLSSGTDRSVVDTASSARPDHSVDQKHLSHDDDAQSCCIGEVESDHQFALREGEEAEGDDGPDDRKRRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTLGAVSL* - >LOC_Os03g27390.1
MGEKVNPWCHWSNPPWTESSANNLHPPDVSLDNTNSVALPTYLNSDGYIYSGVAASMPSIAASVTDRPVSFSSRFVTTLVPSVGLSTAETLRKRPLVFFHNVNNTFTVGPLLSKGTLDTVPELQGSNETNVTDVGAQNTECMHENTEEIDALLCSDSDEGCLKVQELNNRVRKYPMQNDTMSVESVASAGASQPAKKRRLSSGTDRSVVDTASSARPDHSVDQKHLSHDDDAQSCCIGEVESDHQFALREGEEAEGDDGPDDRKRRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTLGAVSL*