Gene Details:

Functional Descriptions:

  • Chromatin-remodeling factor OsINO80 is involved in regulation of gibberellin biosynthesis and is crucial for rice plant growth and development.
  • Thus, our study identified a rice chromatin-remodeling factor, OsINO80, and demonstrated that OsINO80 is involved in regulation of the GA biosynthesis pathway and plays critical functions for many aspects of rice plant growth and development.
  • Consistently, transcriptome analyses reveal that OsINO80 knockdown results in downregulation by more than two-fold of over 1,000 genes, including the GA biosynthesis genes CPS1 and GA3ox2, and the dwarf phenotype of OsINO80-knockdown mutants can be rescued by the application of exogenous GA3.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os03g22900.1
    ATGGACCCGCGGCGCCCTCCGTCGCGCGGGGGCGCCGCCGCCAACGGCGGCGGGCTCTCCTACTCCACCCTCTTCAACCTCGAGCCTTTGCTGAACTTTAAGGTCCCCTTGCCGGAAGATCTTGATCGCTATAGGCGTAGTAGCCCAAATGGGAGTATGAGTAGCCAAGGTCAAGGGTCCTTGTCAGACCAGTATAATGGAATTAATGATGCTTCCCATGGGCTACATCGGAAGCGCAAAAGGAATCTGGATGGTGCTAGCGATGATGATGAGGTAGATGCCTACAGTAACCAAATAACTGAGGAGCACTACCGTACAATGCTGAGTGAACACGTTCAGAAGTACAGAAGGTCAAAGTTTAAGGAGGATGTTTTTAGTTCTGATCCTCCTCAGGTGATAGTTCCTCAGAAACACAAAAATGGTAGTGCAAGAGTTACAAAGTACAGAAGTGATACAAGGAATGTTGCAATGTTGGGTGGGGTAGAAGCCACAGCTGAGTATAATGGGACAAAATCTACTAATGCATATGGTGGTTTCAATAAGGTTGTAGCTTCACTGGATTCTTCCTATTTAGATATGGGAGATAATGTAAGCTACAAAATCCCAGAAGGGTATGATAAGTTGGCACTATCCCTTAATCTACCTGTTTTTTCTGACATACGTGTCGAGGAAACTTTCTTGAATGGCACACTAGATTTACGCACTCTAGCGGCAATGCTCAGTACGGACCAAAAATTTGAGACAACCAATCGTGGTGGATTAGCTGAACCTCAGCCACAATATGAATCACTCCAGGAAAGGGTAAAGGTGCAGAAATTTTCTCTTCAAGTAACTGAGGATCCCTTCGCAATTCCAGAAGGAGCAGCTGGGAGGATACGGAGATTTATTATTTCGGAATCCGGCAGTTTGCATGTTCATTACGTTAAAGTCTTGGAAAAAGGAGATACATATGAGATTATCGAGCGTAGTTTGCCAAAGAAGCAAATAATAAGAAAGGATCCTTCTGAAATTGCAAGAGAAGAGTCAGAAAAGACTATTAAACTTTGGCATGCTATTGCTGTTAAAGGCATTCCTAGGCACCACAGGAATTTCATGGCTTTGCTGAAGAAACGGCAAGTAGATGCTAAGCGTTTTTCTGAGAATTGCCAACGGGAGGTAAAGTTCAAAGTAAGCAGGTCACTGAAATTGATGAGGAGTGCCGCCATACGTACACGGAGGCTGGCTAGGGATATGTTGATATTTTGGAAGCGAGTTGACAAGGAGCAGTATGAATTGAGGAAAAGAGAAGAAAAGGAGGCGGCTGAAGCTTTGAAGCGTGAAGAGGAGCTACGTGAAGCAAAAAGACAGCAACAGAGGCTCAACTTTCTCCTATCCCAAACTGAGCTTTATAGTCACTTTATGCAGAATAAGGCTGGTGAATCAGCACCATCAGATGAGGCATCTGTCCCTGAAGAGGATGAGGAAGATCCTGAGGAAGCTGAATTAAAGAGAGAGGCCTTGAGAGCTGCGCAACATGCTGTCTCCCAACAGAAAAGGATGACAAATGCGTTTGATAGTGAAACTGGGAGGCTTCGTCAATCATCTGACTCTGGTATTCCAACTGATGATTTAGCTAGTATGGAGCCTAACAAGATTGATCTATTACACCCCTCAACAATGCCTGAGAAGTCGTCTGTGCAGACACCAGAATTGTTTAAAGGTGCACTAAAAGAATATCAGTTAAAAGGTTTACAGTGGTTGGTTAATTGCTACGAGCAGGGATTAAATGGTATTCTTGCTGATGAGATGGGTCTTGGCAAAACCGTCCAGGCTATGGCATTCTTAGCACATTTGGCTGAGGACAAAAACATATGGGGTCCCTTTCTTGTTGTGGCTCCCGCATCTGTTGTGAATAATTGGGCTGAAGAGATACTTGTGAATGAAGAGAAGCTTTTGAGACGTGTTAAGTGGCAATACATGGTTTTGGATGAGGCCCAGGCTATTAAAAGTTCAAGCAGCCAGCGATGGAAGACATTACTGAGTTTTAACTGTCGAAATCGCTTGCTTCTCACTGGAACACCTATACAGAACAACATGGCTGAGTTATGGGCGCTTCTTCATTTCATCATGCCTACTTTGTTTGACAGCCATGAACAGTTTAATGAGTGGTTCTCAAAAGGAATTGAGGGTCATGCCGAACATGGAGGTGCTCTGAATGAACATCAGCTTAGTCGACTGCATGCTATTTTAAAGCCCTTCATGCTCCGTCGAGTTAAGATTGATGTCATTGCAGAAATGACCAAAAAGAAAGAAGAAATTGTGCCCTGCAGATTGAGTTCTCGCCAGCAAGTCTTCTATCAAGCCATAAAGAATAAAATATCTCTTAACGAGTTGCTTGATGGAAGTCGTGGCAATCTAAATGATAAGAAATTACTTAGCCTGATGAATATTGTGATGCAGCTCCGGAAGGTCTGCAATCATCCAGAGCTGTTTGAGCGCAATGAGGGGAGCTCTTACTTTTACTTTGCTGACATCCCGAACTCACTTCTTTCTCCTGCATTTGGGGAATTGCAAGATGTGCATTATGCAGGGAAGAGGAATCCAATAATGTTTGAGATTCCAAAGTTAGTCTACAAAGGAATCGTCTCGAACATGGAAATGCCTGTGCGTGGTTGTGGATTTCTATATGGATCTTTCAACAGGATGTTTAATATATTTTCGCCAAGCTACATCCATCAATCAGCTTTTCCAGAAGCTATCTCACCAAATAATACTGTTCTGTTATCTGGTGCATTCGGTTTTACACGTTTAATAAATCTCTCCCCAGTTGAAGCTTCTTTCCTGGCCACTTGCTCATTATTCAACAGACTAGCATTCTCAGCAGTGCGATGGAACAAGAAGTACACCGATGAACTTGTGGATGTATTCCTTGACTCAGAAAGTACTGATCTTGAGTCCACTCATAATGATTTAACAACAGTTCGTGCTGTTGTTCGCTTGTTGCTTTCACCTACAAAAGCAGAGTCCAGTTTCCTAAGAACAAAGATTGAGACAGGCCCGAGTGATAGCCCATATGAAGCACTAGTGCTTTCTCACCATGAAAGGCTTGTGTCTAACATAAGACTTCTTCGTTCAACATATGCTTTTATTCCACCTGCTAGAGCACCACCGATAAATGTCTGGTGCGCAGACCGAAATTTTGCCTACAAGTTAACTGATGAGATGCATGATCCATTGGCCAAGAAACTGGTTCTGGGATTTGCTCGAACTTCTGAGTTCAATGGCCCTAGAGAACCAACCAGCCCTCATTCTCTGATAGAAGAATTACATACTGATTTGCCATTCCCCGAGCCGATGCTACAACTGCCATATAGGATATTTGGGTCATCTCCACCTATGAGTAACTTTGACCCAGCTAAAATGCTTACAGATTCTGGGAAGCTCCAAACCTTAGATATACTGCTGCGGCGCCTCCGAGCTGAGAATCACCGTGTGCTCTTATTTGCTCAGATGACTAAAATGTTAGACATTCTTGAGGACTACATGAACTTCAGAAAATTCAAGTATTTCAGACTTGATGGGTCATCGGCAATATCTGATCGACGTGACATGGTCCGGGACTTCCAGAACCGGAACGATATATTTGTTTTCTTGCTAAGCACAAGAGCTGGGGGCCTAGGTATTAATTTGACTGCTGCTGATACAGTTATTTTTTATGAAATTGATTGGAACCCAACACAAGACCAGCAAGCAATGGATAGAACACACAGACTTGGTCAGACAAAGGAGGTAACGGTGTATAGACTTATATGCAAAGATACAATAGAAGAGAAGATATTGCAGAGGGCAAAGCAGAAAAATGCAGTGCAAGAGTTGGTCATGAAAGGAAAACATGTCCAGGATGATCATCTGATGAGACAAGAGGATGTTGTTTCATTACTTATTGATGACACACAGATATCGCACAAATTAAAAGAAATATCAATGCAGGCAAAGGACCGACTAAAAAAGAGGCGTACAAAGGGCATCAAGGTTGACAAAGAAGGAGATTTGATGCTTGAAGACTTGGATGATCAAACTTCAGGGGCTGCAGAACATGATAACACATCAAGCAAAAAGAAGAAAAGCTCCCAAAAGAAGCTTCCAAAGTTGCAGGATAATGGTAGTGTGGACAAGAATGCAGAGGCTGAAGGCGGTGAAGTGGAGGATGAAGATAGTATTGCAGCTCCTAGGCCTAAAAGATCGAAGAGACTGATGAAGAACTTGAACGAGGACAAGGAACCAGAACAGGAACCAACGACTGATGGTGACAATCCGGCAGAAGCAGCTGAGAATAACATATCTCCTGACGATAATGATACAGAAGAGGCAAAAGATCGGACTCCTTCAGCCTAACTGACAAATTAATCGGATAACAAACACAGGGTGCTAAATGGCAAGGCTAGTGTGATCTATCCTGCCCGATTTATGACATGGGCACGACAGATTGCATGGTTCATTGTCAAGAGGAATAGTCGTTGGATCTTCCTGAAGGTGTCACACAGTTCAATAAGTGTTTATGTGCACATCTTTTTCGGAAGCCTGGGAACTGGGTTAGTTGTATATTCGATTGTGTTAGAAGGCATCAGTGCAGTGGCATCGGTTGCTGTTAATCGTGACATGGGCGAATCCTCTAGCTGTTGCTGCGGATGTTGGAATTGTGGAGACCTGACCGCTGATATCTGTGATGCTGGCTGTGGCCATTATGTAAATAATCATGAAAAATATTGCATCACATATAGAAATAATTTTGCCGTGTAAAGAGAGTAGGTGACTATATTAACCATAAGTTTTGTATTGATAGCTGAAAGAGAACATAGCAGGAAAGCTGCTGTGCTTCCAAATTGGAAACATTTTCGACCATTTATGAACGTCTATGCTAATCCCTATGCTAAATTGCTAATTGTTATA
CDS Sequence
  • >LOC_Os03g22900.1
    ATGGACCCGCGGCGCCCTCCGTCGCGCGGGGGCGCCGCCGCCAACGGCGGCGGGCTCTCCTACTCCACCCTCTTCAACCTCGAGCCTTTGCTGAACTTTAAGGTCCCCTTGCCGGAAGATCTTGATCGCTATAGGCGTAGTAGCCCAAATGGGAGTATGAGTAGCCAAGGTCAAGGGTCCTTGTCAGACCAGTATAATGGAATTAATGATGCTTCCCATGGGCTACATCGGAAGCGCAAAAGGAATCTGGATGGTGCTAGCGATGATGATGAGGTAGATGCCTACAGTAACCAAATAACTGAGGAGCACTACCGTACAATGCTGAGTGAACACGTTCAGAAGTACAGAAGGTCAAAGTTTAAGGAGGATGTTTTTAGTTCTGATCCTCCTCAGGTGATAGTTCCTCAGAAACACAAAAATGGTAGTGCAAGAGTTACAAAGTACAGAAGTGATACAAGGAATGTTGCAATGTTGGGTGGGGTAGAAGCCACAGCTGAGTATAATGGGACAAAATCTACTAATGCATATGGTGGTTTCAATAAGGTTGTAGCTTCACTGGATTCTTCCTATTTAGATATGGGAGATAATGTAAGCTACAAAATCCCAGAAGGGTATGATAAGTTGGCACTATCCCTTAATCTACCTGTTTTTTCTGACATACGTGTCGAGGAAACTTTCTTGAATGGCACACTAGATTTACGCACTCTAGCGGCAATGCTCAGTACGGACCAAAAATTTGAGACAACCAATCGTGGTGGATTAGCTGAACCTCAGCCACAATATGAATCACTCCAGGAAAGGGTAAAGGTGCAGAAATTTTCTCTTCAAGTAACTGAGGATCCCTTCGCAATTCCAGAAGGAGCAGCTGGGAGGATACGGAGATTTATTATTTCGGAATCCGGCAGTTTGCATGTTCATTACGTTAAAGTCTTGGAAAAAGGAGATACATATGAGATTATCGAGCGTAGTTTGCCAAAGAAGCAAATAATAAGAAAGGATCCTTCTGAAATTGCAAGAGAAGAGTCAGAAAAGACTATTAAACTTTGGCATGCTATTGCTGTTAAAGGCATTCCTAGGCACCACAGGAATTTCATGGCTTTGCTGAAGAAACGGCAAGTAGATGCTAAGCGTTTTTCTGAGAATTGCCAACGGGAGGTAAAGTTCAAAGTAAGCAGGTCACTGAAATTGATGAGGAGTGCCGCCATACGTACACGGAGGCTGGCTAGGGATATGTTGATATTTTGGAAGCGAGTTGACAAGGAGCAGTATGAATTGAGGAAAAGAGAAGAAAAGGAGGCGGCTGAAGCTTTGAAGCGTGAAGAGGAGCTACGTGAAGCAAAAAGACAGCAACAGAGGCTCAACTTTCTCCTATCCCAAACTGAGCTTTATAGTCACTTTATGCAGAATAAGGCTGGTGAATCAGCACCATCAGATGAGGCATCTGTCCCTGAAGAGGATGAGGAAGATCCTGAGGAAGCTGAATTAAAGAGAGAGGCCTTGAGAGCTGCGCAACATGCTGTCTCCCAACAGAAAAGGATGACAAATGCGTTTGATAGTGAAACTGGGAGGCTTCGTCAATCATCTGACTCTGGTATTCCAACTGATGATTTAGCTAGTATGGAGCCTAACAAGATTGATCTATTACACCCCTCAACAATGCCTGAGAAGTCGTCTGTGCAGACACCAGAATTGTTTAAAGGTGCACTAAAAGAATATCAGTTAAAAGGTTTACAGTGGTTGGTTAATTGCTACGAGCAGGGATTAAATGGTATTCTTGCTGATGAGATGGGTCTTGGCAAAACCGTCCAGGCTATGGCATTCTTAGCACATTTGGCTGAGGACAAAAACATATGGGGTCCCTTTCTTGTTGTGGCTCCCGCATCTGTTGTGAATAATTGGGCTGAAGAGATACTTGTGAATGAAGAGAAGCTTTTGAGACGTGTTAAGTGGCAATACATGGTTTTGGATGAGGCCCAGGCTATTAAAAGTTCAAGCAGCCAGCGATGGAAGACATTACTGAGTTTTAACTGTCGAAATCGCTTGCTTCTCACTGGAACACCTATACAGAACAACATGGCTGAGTTATGGGCGCTTCTTCATTTCATCATGCCTACTTTGTTTGACAGCCATGAACAGTTTAATGAGTGGTTCTCAAAAGGAATTGAGGGTCATGCCGAACATGGAGGTGCTCTGAATGAACATCAGCTTAGTCGACTGCATGCTATTTTAAAGCCCTTCATGCTCCGTCGAGTTAAGATTGATGTCATTGCAGAAATGACCAAAAAGAAAGAAGAAATTGTGCCCTGCAGATTGAGTTCTCGCCAGCAAGTCTTCTATCAAGCCATAAAGAATAAAATATCTCTTAACGAGTTGCTTGATGGAAGTCGTGGCAATCTAAATGATAAGAAATTACTTAGCCTGATGAATATTGTGATGCAGCTCCGGAAGGTCTGCAATCATCCAGAGCTGTTTGAGCGCAATGAGGGGAGCTCTTACTTTTACTTTGCTGACATCCCGAACTCACTTCTTTCTCCTGCATTTGGGGAATTGCAAGATGTGCATTATGCAGGGAAGAGGAATCCAATAATGTTTGAGATTCCAAAGTTAGTCTACAAAGGAATCGTCTCGAACATGGAAATGCCTGTGCGTGGTTGTGGATTTCTATATGGATCTTTCAACAGGATGTTTAATATATTTTCGCCAAGCTACATCCATCAATCAGCTTTTCCAGAAGCTATCTCACCAAATAATACTGTTCTGTTATCTGGTGCATTCGGTTTTACACGTTTAATAAATCTCTCCCCAGTTGAAGCTTCTTTCCTGGCCACTTGCTCATTATTCAACAGACTAGCATTCTCAGCAGTGCGATGGAACAAGAAGTACACCGATGAACTTGTGGATGTATTCCTTGACTCAGAAAGTACTGATCTTGAGTCCACTCATAATGATTTAACAACAGTTCGTGCTGTTGTTCGCTTGTTGCTTTCACCTACAAAAGCAGAGTCCAGTTTCCTAAGAACAAAGATTGAGACAGGCCCGAGTGATAGCCCATATGAAGCACTAGTGCTTTCTCACCATGAAAGGCTTGTGTCTAACATAAGACTTCTTCGTTCAACATATGCTTTTATTCCACCTGCTAGAGCACCACCGATAAATGTCTGGTGCGCAGACCGAAATTTTGCCTACAAGTTAACTGATGAGATGCATGATCCATTGGCCAAGAAACTGGTTCTGGGATTTGCTCGAACTTCTGAGTTCAATGGCCCTAGAGAACCAACCAGCCCTCATTCTCTGATAGAAGAATTACATACTGATTTGCCATTCCCCGAGCCGATGCTACAACTGCCATATAGGATATTTGGGTCATCTCCACCTATGAGTAACTTTGACCCAGCTAAAATGCTTACAGATTCTGGGAAGCTCCAAACCTTAGATATACTGCTGCGGCGCCTCCGAGCTGAGAATCACCGTGTGCTCTTATTTGCTCAGATGACTAAAATGTTAGACATTCTTGAGGACTACATGAACTTCAGAAAATTCAAGTATTTCAGACTTGATGGGTCATCGGCAATATCTGATCGACGTGACATGGTCCGGGACTTCCAGAACCGGAACGATATATTTGTTTTCTTGCTAAGCACAAGAGCTGGGGGCCTAGGTATTAATTTGACTGCTGCTGATACAGTTATTTTTTATGAAATTGATTGGAACCCAACACAAGACCAGCAAGCAATGGATAGAACACACAGACTTGGTCAGACAAAGGAGGTAACGGTGTATAGACTTATATGCAAAGATACAATAGAAGAGAAGATATTGCAGAGGGCAAAGCAGAAAAATGCAGTGCAAGAGTTGGTCATGAAAGGAAAACATGTCCAGGATGATCATCTGATGAGACAAGAGGATGTTGTTTCATTACTTATTGATGACACACAGATATCGCACAAATTAAAAGAAATATCAATGCAGGCAAAGGACCGACTAAAAAAGAGGCGTACAAAGGGCATCAAGGTTGACAAAGAAGGAGATTTGATGCTTGAAGACTTGGATGATCAAACTTCAGGGGCTGCAGAACATGATAACACATCAAGCAAAAAGAAGAAAAGCTCCCAAAAGAAGCTTCCAAAGTTGCAGGATAATGGTAGTGTGGACAAGAATGCAGAGGCTGAAGGCGGTGAAGTGGAGGATGAAGATAGTATTGCAGCTCCTAGGCCTAAAAGATCGAAGAGACTGATGAAGAACTTGAACGAGGACAAGGAACCAGAACAGGAACCAACGACTGATGGTGACAATCCGGCAGAAGCAGCTGAGAATAACATATCTCCTGACGATAATGATACAGAAGAGGCAAAAGATCGGACTCCTTCAGCCTAA
Protein Sequence
  • >LOC_Os03g22900.1
    MDPRRPPSRGGAAANGGGLSYSTLFNLEPLLNFKVPLPEDLDRYRRSSPNGSMSSQGQGSLSDQYNGINDASHGLHRKRKRNLDGASDDDEVDAYSNQITEEHYRTMLSEHVQKYRRSKFKEDVFSSDPPQVIVPQKHKNGSARVTKYRSDTRNVAMLGGVEATAEYNGTKSTNAYGGFNKVVASLDSSYLDMGDNVSYKIPEGYDKLALSLNLPVFSDIRVEETFLNGTLDLRTLAAMLSTDQKFETTNRGGLAEPQPQYESLQERVKVQKFSLQVTEDPFAIPEGAAGRIRRFIISESGSLHVHYVKVLEKGDTYEIIERSLPKKQIIRKDPSEIAREESEKTIKLWHAIAVKGIPRHHRNFMALLKKRQVDAKRFSENCQREVKFKVSRSLKLMRSAAIRTRRLARDMLIFWKRVDKEQYELRKREEKEAAEALKREEELREAKRQQQRLNFLLSQTELYSHFMQNKAGESAPSDEASVPEEDEEDPEEAELKREALRAAQHAVSQQKRMTNAFDSETGRLRQSSDSGIPTDDLASMEPNKIDLLHPSTMPEKSSVQTPELFKGALKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTVQAMAFLAHLAEDKNIWGPFLVVAPASVVNNWAEEILVNEEKLLRRVKWQYMVLDEAQAIKSSSSQRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIEGHAEHGGALNEHQLSRLHAILKPFMLRRVKIDVIAEMTKKKEEIVPCRLSSRQQVFYQAIKNKISLNELLDGSRGNLNDKKLLSLMNIVMQLRKVCNHPELFERNEGSSYFYFADIPNSLLSPAFGELQDVHYAGKRNPIMFEIPKLVYKGIVSNMEMPVRGCGFLYGSFNRMFNIFSPSYIHQSAFPEAISPNNTVLLSGAFGFTRLINLSPVEASFLATCSLFNRLAFSAVRWNKKYTDELVDVFLDSESTDLESTHNDLTTVRAVVRLLLSPTKAESSFLRTKIETGPSDSPYEALVLSHHERLVSNIRLLRSTYAFIPPARAPPINVWCADRNFAYKLTDEMHDPLAKKLVLGFARTSEFNGPREPTSPHSLIEELHTDLPFPEPMLQLPYRIFGSSPPMSNFDPAKMLTDSGKLQTLDILLRRLRAENHRVLLFAQMTKMLDILEDYMNFRKFKYFRLDGSSAISDRRDMVRDFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYEIDWNPTQDQQAMDRTHRLGQTKEVTVYRLICKDTIEEKILQRAKQKNAVQELVMKGKHVQDDHLMRQEDVVSLLIDDTQISHKLKEISMQAKDRLKKRRTKGIKVDKEGDLMLEDLDDQTSGAAEHDNTSSKKKKSSQKKLPKLQDNGSVDKNAEAEGGEVEDEDSIAAPRPKRSKRLMKNLNEDKEPEQEPTTDGDNPAEAAENNISPDDNDTEEAKDRTPSA*