Information report for OsINO80
Gene Details
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Functional Descriptions
- Chromatin-remodeling factor OsINO80 is involved in regulation of gibberellin biosynthesis and is crucial for rice plant growth and development.
- Thus, our study identified a rice chromatin-remodeling factor, OsINO80, and demonstrated that OsINO80 is involved in regulation of the GA biosynthesis pathway and plays critical functions for many aspects of rice plant growth and development.
- Consistently, transcriptome analyses reveal that OsINO80 knockdown results in downregulation by more than two-fold of over 1,000 genes, including the GA biosynthesis genes CPS1 and GA3ox2, and the dwarf phenotype of OsINO80-knockdown mutants can be rescued by the application of exogenous GA3.
Functional Keywords
- growth , development , gibberellin , plant-growth , ga , dwarf , Gibberellin , GA , GA-biosynthesis , gibberellin-biosynthesis
Literature and News
Gene Resources
- UniProt: Q10LF6
- EMBL: DP000009
- EnsemblPlants: Os03t0352500-01
- Gramene: Os03t0352500-01
- InterPro: IPR000330, IPR001650, IPR014001
- PANTHER: PTHR45685, PTHR45685:SF2
- SUPFAM: SSF52540
- PROSITE: PS51192, PS51194, PS51413
- Gene3D: 3.40.50.10810, 3.40.50.300
- Conserved Domain Database: cd18793
Sequences
cDNA Sequence
- >LOC_Os03g22900.1
ATGGACCCGCGGCGCCCTCCGTCGCGCGGGGGCGCCGCCGCCAACGGCGGCGGGCTCTCCTACTCCACCCTCTTCAACCTCGAGCCTTTGCTGAACTTTAAGGTCCCCTTGCCGGAAGATCTTGATCGCTATAGGCGTAGTAGCCCAAATGGGAGTATGAGTAGCCAAGGTCAAGGGTCCTTGTCAGACCAGTATAATGGAATTAATGATGCTTCCCATGGGCTACATCGGAAGCGCAAAAGGAATCTGGATGGTGCTAGCGATGATGATGAGGTAGATGCCTACAGTAACCAAATAACTGAGGAGCACTACCGTACAATGCTGAGTGAACACGTTCAGAAGTACAGAAGGTCAAAGTTTAAGGAGGATGTTTTTAGTTCTGATCCTCCTCAGGTGATAGTTCCTCAGAAACACAAAAATGGTAGTGCAAGAGTTACAAAGTACAGAAGTGATACAAGGAATGTTGCAATGTTGGGTGGGGTAGAAGCCACAGCTGAGTATAATGGGACAAAATCTACTAATGCATATGGTGGTTTCAATAAGGTTGTAGCTTCACTGGATTCTTCCTATTTAGATATGGGAGATAATGTAAGCTACAAAATCCCAGAAGGGTATGATAAGTTGGCACTATCCCTTAATCTACCTGTTTTTTCTGACATACGTGTCGAGGAAACTTTCTTGAATGGCACACTAGATTTACGCACTCTAGCGGCAATGCTCAGTACGGACCAAAAATTTGAGACAACCAATCGTGGTGGATTAGCTGAACCTCAGCCACAATATGAATCACTCCAGGAAAGGGTAAAGGTGCAGAAATTTTCTCTTCAAGTAACTGAGGATCCCTTCGCAATTCCAGAAGGAGCAGCTGGGAGGATACGGAGATTTATTATTTCGGAATCCGGCAGTTTGCATGTTCATTACGTTAAAGTCTTGGAAAAAGGAGATACATATGAGATTATCGAGCGTAGTTTGCCAAAGAAGCAAATAATAAGAAAGGATCCTTCTGAAATTGCAAGAGAAGAGTCAGAAAAGACTATTAAACTTTGGCATGCTATTGCTGTTAAAGGCATTCCTAGGCACCACAGGAATTTCATGGCTTTGCTGAAGAAACGGCAAGTAGATGCTAAGCGTTTTTCTGAGAATTGCCAACGGGAGGTAAAGTTCAAAGTAAGCAGGTCACTGAAATTGATGAGGAGTGCCGCCATACGTACACGGAGGCTGGCTAGGGATATGTTGATATTTTGGAAGCGAGTTGACAAGGAGCAGTATGAATTGAGGAAAAGAGAAGAAAAGGAGGCGGCTGAAGCTTTGAAGCGTGAAGAGGAGCTACGTGAAGCAAAAAGACAGCAACAGAGGCTCAACTTTCTCCTATCCCAAACTGAGCTTTATAGTCACTTTATGCAGAATAAGGCTGGTGAATCAGCACCATCAGATGAGGCATCTGTCCCTGAAGAGGATGAGGAAGATCCTGAGGAAGCTGAATTAAAGAGAGAGGCCTTGAGAGCTGCGCAACATGCTGTCTCCCAACAGAAAAGGATGACAAATGCGTTTGATAGTGAAACTGGGAGGCTTCGTCAATCATCTGACTCTGGTATTCCAACTGATGATTTAGCTAGTATGGAGCCTAACAAGATTGATCTATTACACCCCTCAACAATGCCTGAGAAGTCGTCTGTGCAGACACCAGAATTGTTTAAAGGTGCACTAAAAGAATATCAGTTAAAAGGTTTACAGTGGTTGGTTAATTGCTACGAGCAGGGATTAAATGGTATTCTTGCTGATGAGATGGGTCTTGGCAAAACCGTCCAGGCTATGGCATTCTTAGCACATTTGGCTGAGGACAAAAACATATGGGGTCCCTTTCTTGTTGTGGCTCCCGCATCTGTTGTGAATAATTGGGCTGAAGAGATACTTGTGAATGAAGAGAAGCTTTTGAGACGTGTTAAGTGGCAATACATGGTTTTGGATGAGGCCCAGGCTATTAAAAGTTCAAGCAGCCAGCGATGGAAGACATTACTGAGTTTTAACTGTCGAAATCGCTTGCTTCTCACTGGAACACCTATACAGAACAACATGGCTGAGTTATGGGCGCTTCTTCATTTCATCATGCCTACTTTGTTTGACAGCCATGAACAGTTTAATGAGTGGTTCTCAAAAGGAATTGAGGGTCATGCCGAACATGGAGGTGCTCTGAATGAACATCAGCTTAGTCGACTGCATGCTATTTTAAAGCCCTTCATGCTCCGTCGAGTTAAGATTGATGTCATTGCAGAAATGACCAAAAAGAAAGAAGAAATTGTGCCCTGCAGATTGAGTTCTCGCCAGCAAGTCTTCTATCAAGCCATAAAGAATAAAATATCTCTTAACGAGTTGCTTGATGGAAGTCGTGGCAATCTAAATGATAAGAAATTACTTAGCCTGATGAATATTGTGATGCAGCTCCGGAAGGTCTGCAATCATCCAGAGCTGTTTGAGCGCAATGAGGGGAGCTCTTACTTTTACTTTGCTGACATCCCGAACTCACTTCTTTCTCCTGCATTTGGGGAATTGCAAGATGTGCATTATGCAGGGAAGAGGAATCCAATAATGTTTGAGATTCCAAAGTTAGTCTACAAAGGAATCGTCTCGAACATGGAAATGCCTGTGCGTGGTTGTGGATTTCTATATGGATCTTTCAACAGGATGTTTAATATATTTTCGCCAAGCTACATCCATCAATCAGCTTTTCCAGAAGCTATCTCACCAAATAATACTGTTCTGTTATCTGGTGCATTCGGTTTTACACGTTTAATAAATCTCTCCCCAGTTGAAGCTTCTTTCCTGGCCACTTGCTCATTATTCAACAGACTAGCATTCTCAGCAGTGCGATGGAACAAGAAGTACACCGATGAACTTGTGGATGTATTCCTTGACTCAGAAAGTACTGATCTTGAGTCCACTCATAATGATTTAACAACAGTTCGTGCTGTTGTTCGCTTGTTGCTTTCACCTACAAAAGCAGAGTCCAGTTTCCTAAGAACAAAGATTGAGACAGGCCCGAGTGATAGCCCATATGAAGCACTAGTGCTTTCTCACCATGAAAGGCTTGTGTCTAACATAAGACTTCTTCGTTCAACATATGCTTTTATTCCACCTGCTAGAGCACCACCGATAAATGTCTGGTGCGCAGACCGAAATTTTGCCTACAAGTTAACTGATGAGATGCATGATCCATTGGCCAAGAAACTGGTTCTGGGATTTGCTCGAACTTCTGAGTTCAATGGCCCTAGAGAACCAACCAGCCCTCATTCTCTGATAGAAGAATTACATACTGATTTGCCATTCCCCGAGCCGATGCTACAACTGCCATATAGGATATTTGGGTCATCTCCACCTATGAGTAACTTTGACCCAGCTAAAATGCTTACAGATTCTGGGAAGCTCCAAACCTTAGATATACTGCTGCGGCGCCTCCGAGCTGAGAATCACCGTGTGCTCTTATTTGCTCAGATGACTAAAATGTTAGACATTCTTGAGGACTACATGAACTTCAGAAAATTCAAGTATTTCAGACTTGATGGGTCATCGGCAATATCTGATCGACGTGACATGGTCCGGGACTTCCAGAACCGGAACGATATATTTGTTTTCTTGCTAAGCACAAGAGCTGGGGGCCTAGGTATTAATTTGACTGCTGCTGATACAGTTATTTTTTATGAAATTGATTGGAACCCAACACAAGACCAGCAAGCAATGGATAGAACACACAGACTTGGTCAGACAAAGGAGGTAACGGTGTATAGACTTATATGCAAAGATACAATAGAAGAGAAGATATTGCAGAGGGCAAAGCAGAAAAATGCAGTGCAAGAGTTGGTCATGAAAGGAAAACATGTCCAGGATGATCATCTGATGAGACAAGAGGATGTTGTTTCATTACTTATTGATGACACACAGATATCGCACAAATTAAAAGAAATATCAATGCAGGCAAAGGACCGACTAAAAAAGAGGCGTACAAAGGGCATCAAGGTTGACAAAGAAGGAGATTTGATGCTTGAAGACTTGGATGATCAAACTTCAGGGGCTGCAGAACATGATAACACATCAAGCAAAAAGAAGAAAAGCTCCCAAAAGAAGCTTCCAAAGTTGCAGGATAATGGTAGTGTGGACAAGAATGCAGAGGCTGAAGGCGGTGAAGTGGAGGATGAAGATAGTATTGCAGCTCCTAGGCCTAAAAGATCGAAGAGACTGATGAAGAACTTGAACGAGGACAAGGAACCAGAACAGGAACCAACGACTGATGGTGACAATCCGGCAGAAGCAGCTGAGAATAACATATCTCCTGACGATAATGATACAGAAGAGGCAAAAGATCGGACTCCTTCAGCCTAACTGACAAATTAATCGGATAACAAACACAGGGTGCTAAATGGCAAGGCTAGTGTGATCTATCCTGCCCGATTTATGACATGGGCACGACAGATTGCATGGTTCATTGTCAAGAGGAATAGTCGTTGGATCTTCCTGAAGGTGTCACACAGTTCAATAAGTGTTTATGTGCACATCTTTTTCGGAAGCCTGGGAACTGGGTTAGTTGTATATTCGATTGTGTTAGAAGGCATCAGTGCAGTGGCATCGGTTGCTGTTAATCGTGACATGGGCGAATCCTCTAGCTGTTGCTGCGGATGTTGGAATTGTGGAGACCTGACCGCTGATATCTGTGATGCTGGCTGTGGCCATTATGTAAATAATCATGAAAAATATTGCATCACATATAGAAATAATTTTGCCGTGTAAAGAGAGTAGGTGACTATATTAACCATAAGTTTTGTATTGATAGCTGAAAGAGAACATAGCAGGAAAGCTGCTGTGCTTCCAAATTGGAAACATTTTCGACCATTTATGAACGTCTATGCTAATCCCTATGCTAAATTGCTAATTGTTATA
CDS Sequence
- >LOC_Os03g22900.1
ATGGACCCGCGGCGCCCTCCGTCGCGCGGGGGCGCCGCCGCCAACGGCGGCGGGCTCTCCTACTCCACCCTCTTCAACCTCGAGCCTTTGCTGAACTTTAAGGTCCCCTTGCCGGAAGATCTTGATCGCTATAGGCGTAGTAGCCCAAATGGGAGTATGAGTAGCCAAGGTCAAGGGTCCTTGTCAGACCAGTATAATGGAATTAATGATGCTTCCCATGGGCTACATCGGAAGCGCAAAAGGAATCTGGATGGTGCTAGCGATGATGATGAGGTAGATGCCTACAGTAACCAAATAACTGAGGAGCACTACCGTACAATGCTGAGTGAACACGTTCAGAAGTACAGAAGGTCAAAGTTTAAGGAGGATGTTTTTAGTTCTGATCCTCCTCAGGTGATAGTTCCTCAGAAACACAAAAATGGTAGTGCAAGAGTTACAAAGTACAGAAGTGATACAAGGAATGTTGCAATGTTGGGTGGGGTAGAAGCCACAGCTGAGTATAATGGGACAAAATCTACTAATGCATATGGTGGTTTCAATAAGGTTGTAGCTTCACTGGATTCTTCCTATTTAGATATGGGAGATAATGTAAGCTACAAAATCCCAGAAGGGTATGATAAGTTGGCACTATCCCTTAATCTACCTGTTTTTTCTGACATACGTGTCGAGGAAACTTTCTTGAATGGCACACTAGATTTACGCACTCTAGCGGCAATGCTCAGTACGGACCAAAAATTTGAGACAACCAATCGTGGTGGATTAGCTGAACCTCAGCCACAATATGAATCACTCCAGGAAAGGGTAAAGGTGCAGAAATTTTCTCTTCAAGTAACTGAGGATCCCTTCGCAATTCCAGAAGGAGCAGCTGGGAGGATACGGAGATTTATTATTTCGGAATCCGGCAGTTTGCATGTTCATTACGTTAAAGTCTTGGAAAAAGGAGATACATATGAGATTATCGAGCGTAGTTTGCCAAAGAAGCAAATAATAAGAAAGGATCCTTCTGAAATTGCAAGAGAAGAGTCAGAAAAGACTATTAAACTTTGGCATGCTATTGCTGTTAAAGGCATTCCTAGGCACCACAGGAATTTCATGGCTTTGCTGAAGAAACGGCAAGTAGATGCTAAGCGTTTTTCTGAGAATTGCCAACGGGAGGTAAAGTTCAAAGTAAGCAGGTCACTGAAATTGATGAGGAGTGCCGCCATACGTACACGGAGGCTGGCTAGGGATATGTTGATATTTTGGAAGCGAGTTGACAAGGAGCAGTATGAATTGAGGAAAAGAGAAGAAAAGGAGGCGGCTGAAGCTTTGAAGCGTGAAGAGGAGCTACGTGAAGCAAAAAGACAGCAACAGAGGCTCAACTTTCTCCTATCCCAAACTGAGCTTTATAGTCACTTTATGCAGAATAAGGCTGGTGAATCAGCACCATCAGATGAGGCATCTGTCCCTGAAGAGGATGAGGAAGATCCTGAGGAAGCTGAATTAAAGAGAGAGGCCTTGAGAGCTGCGCAACATGCTGTCTCCCAACAGAAAAGGATGACAAATGCGTTTGATAGTGAAACTGGGAGGCTTCGTCAATCATCTGACTCTGGTATTCCAACTGATGATTTAGCTAGTATGGAGCCTAACAAGATTGATCTATTACACCCCTCAACAATGCCTGAGAAGTCGTCTGTGCAGACACCAGAATTGTTTAAAGGTGCACTAAAAGAATATCAGTTAAAAGGTTTACAGTGGTTGGTTAATTGCTACGAGCAGGGATTAAATGGTATTCTTGCTGATGAGATGGGTCTTGGCAAAACCGTCCAGGCTATGGCATTCTTAGCACATTTGGCTGAGGACAAAAACATATGGGGTCCCTTTCTTGTTGTGGCTCCCGCATCTGTTGTGAATAATTGGGCTGAAGAGATACTTGTGAATGAAGAGAAGCTTTTGAGACGTGTTAAGTGGCAATACATGGTTTTGGATGAGGCCCAGGCTATTAAAAGTTCAAGCAGCCAGCGATGGAAGACATTACTGAGTTTTAACTGTCGAAATCGCTTGCTTCTCACTGGAACACCTATACAGAACAACATGGCTGAGTTATGGGCGCTTCTTCATTTCATCATGCCTACTTTGTTTGACAGCCATGAACAGTTTAATGAGTGGTTCTCAAAAGGAATTGAGGGTCATGCCGAACATGGAGGTGCTCTGAATGAACATCAGCTTAGTCGACTGCATGCTATTTTAAAGCCCTTCATGCTCCGTCGAGTTAAGATTGATGTCATTGCAGAAATGACCAAAAAGAAAGAAGAAATTGTGCCCTGCAGATTGAGTTCTCGCCAGCAAGTCTTCTATCAAGCCATAAAGAATAAAATATCTCTTAACGAGTTGCTTGATGGAAGTCGTGGCAATCTAAATGATAAGAAATTACTTAGCCTGATGAATATTGTGATGCAGCTCCGGAAGGTCTGCAATCATCCAGAGCTGTTTGAGCGCAATGAGGGGAGCTCTTACTTTTACTTTGCTGACATCCCGAACTCACTTCTTTCTCCTGCATTTGGGGAATTGCAAGATGTGCATTATGCAGGGAAGAGGAATCCAATAATGTTTGAGATTCCAAAGTTAGTCTACAAAGGAATCGTCTCGAACATGGAAATGCCTGTGCGTGGTTGTGGATTTCTATATGGATCTTTCAACAGGATGTTTAATATATTTTCGCCAAGCTACATCCATCAATCAGCTTTTCCAGAAGCTATCTCACCAAATAATACTGTTCTGTTATCTGGTGCATTCGGTTTTACACGTTTAATAAATCTCTCCCCAGTTGAAGCTTCTTTCCTGGCCACTTGCTCATTATTCAACAGACTAGCATTCTCAGCAGTGCGATGGAACAAGAAGTACACCGATGAACTTGTGGATGTATTCCTTGACTCAGAAAGTACTGATCTTGAGTCCACTCATAATGATTTAACAACAGTTCGTGCTGTTGTTCGCTTGTTGCTTTCACCTACAAAAGCAGAGTCCAGTTTCCTAAGAACAAAGATTGAGACAGGCCCGAGTGATAGCCCATATGAAGCACTAGTGCTTTCTCACCATGAAAGGCTTGTGTCTAACATAAGACTTCTTCGTTCAACATATGCTTTTATTCCACCTGCTAGAGCACCACCGATAAATGTCTGGTGCGCAGACCGAAATTTTGCCTACAAGTTAACTGATGAGATGCATGATCCATTGGCCAAGAAACTGGTTCTGGGATTTGCTCGAACTTCTGAGTTCAATGGCCCTAGAGAACCAACCAGCCCTCATTCTCTGATAGAAGAATTACATACTGATTTGCCATTCCCCGAGCCGATGCTACAACTGCCATATAGGATATTTGGGTCATCTCCACCTATGAGTAACTTTGACCCAGCTAAAATGCTTACAGATTCTGGGAAGCTCCAAACCTTAGATATACTGCTGCGGCGCCTCCGAGCTGAGAATCACCGTGTGCTCTTATTTGCTCAGATGACTAAAATGTTAGACATTCTTGAGGACTACATGAACTTCAGAAAATTCAAGTATTTCAGACTTGATGGGTCATCGGCAATATCTGATCGACGTGACATGGTCCGGGACTTCCAGAACCGGAACGATATATTTGTTTTCTTGCTAAGCACAAGAGCTGGGGGCCTAGGTATTAATTTGACTGCTGCTGATACAGTTATTTTTTATGAAATTGATTGGAACCCAACACAAGACCAGCAAGCAATGGATAGAACACACAGACTTGGTCAGACAAAGGAGGTAACGGTGTATAGACTTATATGCAAAGATACAATAGAAGAGAAGATATTGCAGAGGGCAAAGCAGAAAAATGCAGTGCAAGAGTTGGTCATGAAAGGAAAACATGTCCAGGATGATCATCTGATGAGACAAGAGGATGTTGTTTCATTACTTATTGATGACACACAGATATCGCACAAATTAAAAGAAATATCAATGCAGGCAAAGGACCGACTAAAAAAGAGGCGTACAAAGGGCATCAAGGTTGACAAAGAAGGAGATTTGATGCTTGAAGACTTGGATGATCAAACTTCAGGGGCTGCAGAACATGATAACACATCAAGCAAAAAGAAGAAAAGCTCCCAAAAGAAGCTTCCAAAGTTGCAGGATAATGGTAGTGTGGACAAGAATGCAGAGGCTGAAGGCGGTGAAGTGGAGGATGAAGATAGTATTGCAGCTCCTAGGCCTAAAAGATCGAAGAGACTGATGAAGAACTTGAACGAGGACAAGGAACCAGAACAGGAACCAACGACTGATGGTGACAATCCGGCAGAAGCAGCTGAGAATAACATATCTCCTGACGATAATGATACAGAAGAGGCAAAAGATCGGACTCCTTCAGCCTAA
Protein Sequence
- >LOC_Os03g22900.1
MDPRRPPSRGGAAANGGGLSYSTLFNLEPLLNFKVPLPEDLDRYRRSSPNGSMSSQGQGSLSDQYNGINDASHGLHRKRKRNLDGASDDDEVDAYSNQITEEHYRTMLSEHVQKYRRSKFKEDVFSSDPPQVIVPQKHKNGSARVTKYRSDTRNVAMLGGVEATAEYNGTKSTNAYGGFNKVVASLDSSYLDMGDNVSYKIPEGYDKLALSLNLPVFSDIRVEETFLNGTLDLRTLAAMLSTDQKFETTNRGGLAEPQPQYESLQERVKVQKFSLQVTEDPFAIPEGAAGRIRRFIISESGSLHVHYVKVLEKGDTYEIIERSLPKKQIIRKDPSEIAREESEKTIKLWHAIAVKGIPRHHRNFMALLKKRQVDAKRFSENCQREVKFKVSRSLKLMRSAAIRTRRLARDMLIFWKRVDKEQYELRKREEKEAAEALKREEELREAKRQQQRLNFLLSQTELYSHFMQNKAGESAPSDEASVPEEDEEDPEEAELKREALRAAQHAVSQQKRMTNAFDSETGRLRQSSDSGIPTDDLASMEPNKIDLLHPSTMPEKSSVQTPELFKGALKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTVQAMAFLAHLAEDKNIWGPFLVVAPASVVNNWAEEILVNEEKLLRRVKWQYMVLDEAQAIKSSSSQRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIEGHAEHGGALNEHQLSRLHAILKPFMLRRVKIDVIAEMTKKKEEIVPCRLSSRQQVFYQAIKNKISLNELLDGSRGNLNDKKLLSLMNIVMQLRKVCNHPELFERNEGSSYFYFADIPNSLLSPAFGELQDVHYAGKRNPIMFEIPKLVYKGIVSNMEMPVRGCGFLYGSFNRMFNIFSPSYIHQSAFPEAISPNNTVLLSGAFGFTRLINLSPVEASFLATCSLFNRLAFSAVRWNKKYTDELVDVFLDSESTDLESTHNDLTTVRAVVRLLLSPTKAESSFLRTKIETGPSDSPYEALVLSHHERLVSNIRLLRSTYAFIPPARAPPINVWCADRNFAYKLTDEMHDPLAKKLVLGFARTSEFNGPREPTSPHSLIEELHTDLPFPEPMLQLPYRIFGSSPPMSNFDPAKMLTDSGKLQTLDILLRRLRAENHRVLLFAQMTKMLDILEDYMNFRKFKYFRLDGSSAISDRRDMVRDFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYEIDWNPTQDQQAMDRTHRLGQTKEVTVYRLICKDTIEEKILQRAKQKNAVQELVMKGKHVQDDHLMRQEDVVSLLIDDTQISHKLKEISMQAKDRLKKRRTKGIKVDKEGDLMLEDLDDQTSGAAEHDNTSSKKKKSSQKKLPKLQDNGSVDKNAEAEGGEVEDEDSIAAPRPKRSKRLMKNLNEDKEPEQEPTTDGDNPAEAAENNISPDDNDTEEAKDRTPSA*