Gene Details:
- MSU gene ID: LOC_Os03g21800
- RAPdb gene ID: Os03g0336200
- Gene Symbol: RF2b OsbZIP30
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Conversely, lines with elevated expression of RF2a or RF2b showed weak or no symptoms of infection after Agrobacterium inoculation of RTBV, whereas control plants showed severe stunting and leaf discoloration.
- Transgenic rice plants that overexpress transcription factors RF2a and RF2b are tolerant to rice tungro virus replication and disease.
- Furthermore, transgenic rice plants with reduced levels of RF2b exhibit a disease-like phenotype.
- RF2b, a rice bZIP transcription activator, interacts with RF2a and is involved in symptom development of rice tungro disease.
- Two host transcription factors, RF2a and RF2b, regulate expression of the RTBV promoter and are important for plant development.
Function-related keywords:
Literature:
- Genome-wide analysis of basic leucine zipper transcription factor families in Arabidopsis thaliana, Oryza sativa and Populus trichocarpa . DOI: 10.1007/s11741-009-0216-3
- Genomic survey and gene expression analysis of the basic leucine zipper transcription factor family in rice . DOI: 10.1104/pp.107.112821 ; PMID: 18065552
- RF2b, a rice bZIP transcription activator, interacts with RF2a and is involved in symptom development of rice tungro disease . DOI: 10.1073/pnas.0307687100 ; PMID: 14704272
- Transgenic rice plants that overexpress transcription factors RF2a and RF2b are tolerant to rice tungro virus replication and disease . DOI: 10.1073/pnas.0810303105 ; PMID: 19104064
Related News:
Gene Resources:
- NCBI ID: AY466471
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os03g21800.2
AACGCCATCCCAGCGCAGCGCAGGCACGCACGGCACCGGCGGCGGAGGACGCGGCAGGAGCAGCAGCCGCCTCCTCCAATCCCCGAGCCGAACACTCGCTGGCGGGCGCGCGCGCGCGCAGCCGGGGAACCGGGGGGGAGACAGGGTGGTGGTGGTGAGGCGGGGGCGAGCGCAATGCAGGAGCCAAAGCACACCGATCCGGCGGCCATGCGCGGGGCGCACCACCGCCGGGCCAGATCTGAGGTCGCCTTCCGCCTGCCCGACGACCTCGACCTCGGCGGCGGCGGCGCGGGGGCGTTCGACGAGATCGGCTCCGAGGACGACCTCTTCTCCACCTTCATGGACATCGAGAAGATCTCCTCCGGCCCCGCCGCCGCGGGGGGCTCCGACCGGGACCGCGCCGCGGAGACGTCCTCGCCGCCGCGCCCCAAGCACCGCCACAGCAGCTCCGTCGACGGCTCCGGGTTCTTCGCCGCCGCGCGGAAGGACGCCGCCGCATCGCTGGCGGAGGTCATGGAGGCTAAGAAGGCCATGACCCCCGAGCAGCTCTCCGAGCTCGCCGCCATCGACCCCAAGCGCGCCAAAAGAATTCTGGCGAACAGACAATCTGCAGCTCGGTCAAAAGAGAGAAAAGCTCGTTACATAACAGAACTTGAGCGGAAGGTTCAAACTCTTCAGACTGAAGCCACTACTCTCTCAGCACAACTCACACTATTTCAGAGAGACACAACTGGGCTTTCTGCAGAAAATGCAGAGCTCAAGATACGGTTGCAGGCCATGGAACAACAGGCTCAACTGCGAGATGCTCTGAATGATGCACTAAAGCAGGAACTGGAGAGGCTTAAGCTCGCTACTGGTGAGATGACAAATTCCAATGAGACATATAGCATGGGACTGCAACATGTCCCATACAACACCCCTTTCTTCCCTCTCGCCCAGCATAATGCAGCCCGCCAGAACGGTGGAACCCAGTTGCCACCACAATTCCAACCACCCCGTCCTAATGTGCCCAATCACATGCTATCCCATCCAAACGGTTTGCAAGATATCATGCAGCAAGACCCTCTTGGCCGGCTTCAGGGTTTGGACATCAGCAAAGGGCCTCTAGTTGTGAAATCAGAGAGCAGCTCGATCTCTGCAAGTGAAAGCAGCAGCACCTTCTAACCAGGCCTACCCACCGAGCCCACAGTTCCATTAGATTCGTTTGTTCATAGCCTGACATCCTCGCGCTGCTCCCTGTTCTGGCACCAGGACTGGCTTTCTCCGAGAATACTGTGTTCTTTGTGGTCGTGTGGACTTGTTCACCATGGATTCAATTCAACCTTTTGAAAAGATGCATGTATTCTCTGATTTTTTTTTCTCAGTCATGTACATGTCACTGTTATGCTAGTTTGATTGATGTGTACTGTGGAATTTGTGGATAACAAAAGGAGTTAAGATTGGGATTGCTGTGGAACCATCTGTATCGTATATTCGTATGTGACTAATGTTGGGAAATTGTTCTATTCTTGTTCACCATATGCATGTGGGGTAACTTTTCC - >LOC_Os03g21800.1
AACGCCATCCCAGCGCAGCGCAGGCACGCACGGCACCGGCGGCGGAGGACGCGGCAGGAGCAGCAGCCGCCTCCTCCAATCCCCGAGCCGAACACTCGCTGGCGGGCGCGCGCGCGCGCAGCCGGGGAACCGGGGGGGAGACAGGGTGGTGGTGGTGAGGCGGGGGCGAGCGCAATGCAGGAGCCAAAGCACACCGATCCGGCGGCCATGCGCGGGGCGCACCACCGCCGGGCCAGATCTGAGGTCGCCTTCCGCCTGCCCGACGACCTCGACCTCGGCGGCGGCGGCGCGGGGGCGTTCGACGAGATCGGCTCCGAGGACGACCTCTTCTCCACCTTCATGGACATCGAGAAGATCTCCTCCGGCCCCGCCGCCGCGGGGGGCTCCGACCGGGACCGCGCCGCGGAGACGTCCTCGCCGCCGCGCCCCAAGCACCGCCACAGCAGCTCCGTCGACGGCTCCGGGTTCTTCGCCGCCGCGCGGAAGGACGCCGCCGCATCGCTGGCGGAGGTCATGGAGGCTAAGAAGGCCATGACCCCCGAGCAGCTCTCCGAGCTCGCCGCCATCGACCCCAAGCGCGCCAAAAGAATTCTGGCGAACAGACAATCTGCAGCTCGGTCAAAAGAGAGAAAAGCTCGTTACATAACAGAACTTGAGCGGAAGGTTCAAACTCTTCAGACTGAAGCCACTACTCTCTCAGCACAACTCACACTATTTCAGAGAGACACAACTGGGCTTTCTGCAGAAAATGCAGAGCTCAAGATACGGTTGCAGGCCATGGAACAACAGGCTCAACTGCGAGATGCTCTGAATGATGCACTAAAGCAGGAACTGGAGAGGCTTAAGCTCGCTACTGGTGAGATGACAAATTCCAATGAGACATATAGCATGGGACTGCAACATGTCCCATACAACACCCCTTTCTTCCCTCTCGCCCAGCATAATGCAGCCCGCCAGAACGGTGGAACCCAGTTGCCACCACAATTCCAACCACCCCGTCCTAATGTGCCCAATCACATGCTATCCCATCCAAACGGTTTGCAAGATATCATGCAGCAAGACCCTCTTGGCCGGCTTCAGGGTTTGGACATCAGCAAAGGGCCTCTAGTTGTGAAATCAGAGAGCAGCTCGATCTCTGCAAGTGAAAGCAGCAGCACCTTCTAACCAGGCCTACCCACCGAGCCCACAGTTCCATTAGATTCGTTTGTTCATAGCCTGACATCCTCGCGCTGCTCCCTGTTCTGGCACCAGGACTGGCTTTCTCCGAGAATACTGTGTTCTTTGTGGTCGTGTGGACTTGTTCACCATGGATTCAATTCAACCTTTTGAAAAGATGCATGTATTCTCTGATTTTTTTTTCTCAGTCATGTACATGTCACTGTTATGCTAGTTTGATTGATGTGTACTGTGGAATTTGTGGATAACAAAAGGAGTTAAGATTGGGATTGCTGTGGAACCATCTGTATCGTATATTCGTATGTGACTAATGTTGGGAAATTGTTCTATTCTTGTTCACCATATGCATGTGGGGTAACTTTTCC
CDS Sequence
- >LOC_Os03g21800.2
ATGCAGGAGCCAAAGCACACCGATCCGGCGGCCATGCGCGGGGCGCACCACCGCCGGGCCAGATCTGAGGTCGCCTTCCGCCTGCCCGACGACCTCGACCTCGGCGGCGGCGGCGCGGGGGCGTTCGACGAGATCGGCTCCGAGGACGACCTCTTCTCCACCTTCATGGACATCGAGAAGATCTCCTCCGGCCCCGCCGCCGCGGGGGGCTCCGACCGGGACCGCGCCGCGGAGACGTCCTCGCCGCCGCGCCCCAAGCACCGCCACAGCAGCTCCGTCGACGGCTCCGGGTTCTTCGCCGCCGCGCGGAAGGACGCCGCCGCATCGCTGGCGGAGGTCATGGAGGCTAAGAAGGCCATGACCCCCGAGCAGCTCTCCGAGCTCGCCGCCATCGACCCCAAGCGCGCCAAAAGAATTCTGGCGAACAGACAATCTGCAGCTCGGTCAAAAGAGAGAAAAGCTCGTTACATAACAGAACTTGAGCGGAAGGTTCAAACTCTTCAGACTGAAGCCACTACTCTCTCAGCACAACTCACACTATTTCAGAGAGACACAACTGGGCTTTCTGCAGAAAATGCAGAGCTCAAGATACGGTTGCAGGCCATGGAACAACAGGCTCAACTGCGAGATGCTCTGAATGATGCACTAAAGCAGGAACTGGAGAGGCTTAAGCTCGCTACTGGTGAGATGACAAATTCCAATGAGACATATAGCATGGGACTGCAACATGTCCCATACAACACCCCTTTCTTCCCTCTCGCCCAGCATAATGCAGCCCGCCAGAACGGTGGAACCCAGTTGCCACCACAATTCCAACCACCCCGTCCTAATGTGCCCAATCACATGCTATCCCATCCAAACGGTTTGCAAGATATCATGCAGCAAGACCCTCTTGGCCGGCTTCAGGGTTTGGACATCAGCAAAGGGCCTCTAGTTGTGAAATCAGAGAGCAGCTCGATCTCTGCAAGTGAAAGCAGCAGCACCTTCTAA - >LOC_Os03g21800.1
ATGCAGGAGCCAAAGCACACCGATCCGGCGGCCATGCGCGGGGCGCACCACCGCCGGGCCAGATCTGAGGTCGCCTTCCGCCTGCCCGACGACCTCGACCTCGGCGGCGGCGGCGCGGGGGCGTTCGACGAGATCGGCTCCGAGGACGACCTCTTCTCCACCTTCATGGACATCGAGAAGATCTCCTCCGGCCCCGCCGCCGCGGGGGGCTCCGACCGGGACCGCGCCGCGGAGACGTCCTCGCCGCCGCGCCCCAAGCACCGCCACAGCAGCTCCGTCGACGGCTCCGGGTTCTTCGCCGCCGCGCGGAAGGACGCCGCCGCATCGCTGGCGGAGGTCATGGAGGCTAAGAAGGCCATGACCCCCGAGCAGCTCTCCGAGCTCGCCGCCATCGACCCCAAGCGCGCCAAAAGAATTCTGGCGAACAGACAATCTGCAGCTCGGTCAAAAGAGAGAAAAGCTCGTTACATAACAGAACTTGAGCGGAAGGTTCAAACTCTTCAGACTGAAGCCACTACTCTCTCAGCACAACTCACACTATTTCAGAGAGACACAACTGGGCTTTCTGCAGAAAATGCAGAGCTCAAGATACGGTTGCAGGCCATGGAACAACAGGCTCAACTGCGAGATGCTCTGAATGATGCACTAAAGCAGGAACTGGAGAGGCTTAAGCTCGCTACTGGTGAGATGACAAATTCCAATGAGACATATAGCATGGGACTGCAACATGTCCCATACAACACCCCTTTCTTCCCTCTCGCCCAGCATAATGCAGCCCGCCAGAACGGTGGAACCCAGTTGCCACCACAATTCCAACCACCCCGTCCTAATGTGCCCAATCACATGCTATCCCATCCAAACGGTTTGCAAGATATCATGCAGCAAGACCCTCTTGGCCGGCTTCAGGGTTTGGACATCAGCAAAGGGCCTCTAGTTGTGAAATCAGAGAGCAGCTCGATCTCTGCAAGTGAAAGCAGCAGCACCTTCTAA
Protein Sequence
- >LOC_Os03g21800.2
MQEPKHTDPAAMRGAHHRRARSEVAFRLPDDLDLGGGGAGAFDEIGSEDDLFSTFMDIEKISSGPAAAGGSDRDRAAETSSPPRPKHRHSSSVDGSGFFAAARKDAAASLAEVMEAKKAMTPEQLSELAAIDPKRAKRILANRQSAARSKERKARYITELERKVQTLQTEATTLSAQLTLFQRDTTGLSAENAELKIRLQAMEQQAQLRDALNDALKQELERLKLATGEMTNSNETYSMGLQHVPYNTPFFPLAQHNAARQNGGTQLPPQFQPPRPNVPNHMLSHPNGLQDIMQQDPLGRLQGLDISKGPLVVKSESSSISASESSSTF* - >LOC_Os03g21800.1
MQEPKHTDPAAMRGAHHRRARSEVAFRLPDDLDLGGGGAGAFDEIGSEDDLFSTFMDIEKISSGPAAAGGSDRDRAAETSSPPRPKHRHSSSVDGSGFFAAARKDAAASLAEVMEAKKAMTPEQLSELAAIDPKRAKRILANRQSAARSKERKARYITELERKVQTLQTEATTLSAQLTLFQRDTTGLSAENAELKIRLQAMEQQAQLRDALNDALKQELERLKLATGEMTNSNETYSMGLQHVPYNTPFFPLAQHNAARQNGGTQLPPQFQPPRPNVPNHMLSHPNGLQDIMQQDPLGRLQGLDISKGPLVVKSESSSISASESSSTF*