Information report for RF2b;OsbZIP30
Gene Details
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Functional Descriptions
- Conversely, lines with elevated expression of RF2a or RF2b showed weak or no symptoms of infection after Agrobacterium inoculation of RTBV, whereas control plants showed severe stunting and leaf discoloration.
- Transgenic rice plants that overexpress transcription factors RF2a and RF2b are tolerant to rice tungro virus replication and disease.
- Furthermore, transgenic rice plants with reduced levels of RF2b exhibit a disease-like phenotype.
- RF2b, a rice bZIP transcription activator, interacts with RF2a and is involved in symptom development of rice tungro disease.
- Two host transcription factors, RF2a and RF2b, regulate expression of the RTBV promoter and are important for plant development.
Functional Keywords
Literature and News
- Genome-wide analysis of basic leucine zipper transcription factor families in Arabidopsis thaliana, Oryza sativa and Populus trichocarpa . DOI: 10.1007/s11741-009-0216-3
- Genomic survey and gene expression analysis of the basic leucine zipper transcription factor family in rice . DOI: 10.1104/pp.107.112821 ; PMID: 18065552
- RF2b, a rice bZIP transcription activator, interacts with RF2a and is involved in symptom development of rice tungro disease . DOI: 10.1073/pnas.0307687100 ; PMID: 14704272
- Transgenic rice plants that overexpress transcription factors RF2a and RF2b are tolerant to rice tungro virus replication and disease . DOI: 10.1073/pnas.0810303105 ; PMID: 19104064
Gene Resources
- UniProt: Q6S4P4
- EMBL: AC125496, AK059473, AK070466
- AlphaFoldDB: Q6S4P4
- EnsemblPlants: Os03t0336200-01, Os03t0336200-02
- Gramene: Os03t0336200-01, Os03t0336200-02
- KEGG: dosa:Os03g0336200
- Orthologous matrix: TGEMMSH
- InterPro: IPR004827, IPR044759, IPR046347
- PANTHER: PTHR13690, PTHR13690:SF103
- SUPFAM: SSF57959
- PROSITE: PS50217
- Gene3D: 1.20.5.170
- OrthoDB: Q6S4P4
- SWISS-MODEL: Q6S4P4
- Conserved Domain Database: cd14703
- eggNOG: ENOG502QQKB
Sequences
cDNA Sequence
- >LOC_Os03g21800.2
AACGCCATCCCAGCGCAGCGCAGGCACGCACGGCACCGGCGGCGGAGGACGCGGCAGGAGCAGCAGCCGCCTCCTCCAATCCCCGAGCCGAACACTCGCTGGCGGGCGCGCGCGCGCGCAGCCGGGGAACCGGGGGGGAGACAGGGTGGTGGTGGTGAGGCGGGGGCGAGCGCAATGCAGGAGCCAAAGCACACCGATCCGGCGGCCATGCGCGGGGCGCACCACCGCCGGGCCAGATCTGAGGTCGCCTTCCGCCTGCCCGACGACCTCGACCTCGGCGGCGGCGGCGCGGGGGCGTTCGACGAGATCGGCTCCGAGGACGACCTCTTCTCCACCTTCATGGACATCGAGAAGATCTCCTCCGGCCCCGCCGCCGCGGGGGGCTCCGACCGGGACCGCGCCGCGGAGACGTCCTCGCCGCCGCGCCCCAAGCACCGCCACAGCAGCTCCGTCGACGGCTCCGGGTTCTTCGCCGCCGCGCGGAAGGACGCCGCCGCATCGCTGGCGGAGGTCATGGAGGCTAAGAAGGCCATGACCCCCGAGCAGCTCTCCGAGCTCGCCGCCATCGACCCCAAGCGCGCCAAAAGAATTCTGGCGAACAGACAATCTGCAGCTCGGTCAAAAGAGAGAAAAGCTCGTTACATAACAGAACTTGAGCGGAAGGTTCAAACTCTTCAGACTGAAGCCACTACTCTCTCAGCACAACTCACACTATTTCAGAGAGACACAACTGGGCTTTCTGCAGAAAATGCAGAGCTCAAGATACGGTTGCAGGCCATGGAACAACAGGCTCAACTGCGAGATGCTCTGAATGATGCACTAAAGCAGGAACTGGAGAGGCTTAAGCTCGCTACTGGTGAGATGACAAATTCCAATGAGACATATAGCATGGGACTGCAACATGTCCCATACAACACCCCTTTCTTCCCTCTCGCCCAGCATAATGCAGCCCGCCAGAACGGTGGAACCCAGTTGCCACCACAATTCCAACCACCCCGTCCTAATGTGCCCAATCACATGCTATCCCATCCAAACGGTTTGCAAGATATCATGCAGCAAGACCCTCTTGGCCGGCTTCAGGGTTTGGACATCAGCAAAGGGCCTCTAGTTGTGAAATCAGAGAGCAGCTCGATCTCTGCAAGTGAAAGCAGCAGCACCTTCTAACCAGGCCTACCCACCGAGCCCACAGTTCCATTAGATTCGTTTGTTCATAGCCTGACATCCTCGCGCTGCTCCCTGTTCTGGCACCAGGACTGGCTTTCTCCGAGAATACTGTGTTCTTTGTGGTCGTGTGGACTTGTTCACCATGGATTCAATTCAACCTTTTGAAAAGATGCATGTATTCTCTGATTTTTTTTTCTCAGTCATGTACATGTCACTGTTATGCTAGTTTGATTGATGTGTACTGTGGAATTTGTGGATAACAAAAGGAGTTAAGATTGGGATTGCTGTGGAACCATCTGTATCGTATATTCGTATGTGACTAATGTTGGGAAATTGTTCTATTCTTGTTCACCATATGCATGTGGGGTAACTTTTCC - >LOC_Os03g21800.1
AACGCCATCCCAGCGCAGCGCAGGCACGCACGGCACCGGCGGCGGAGGACGCGGCAGGAGCAGCAGCCGCCTCCTCCAATCCCCGAGCCGAACACTCGCTGGCGGGCGCGCGCGCGCGCAGCCGGGGAACCGGGGGGGAGACAGGGTGGTGGTGGTGAGGCGGGGGCGAGCGCAATGCAGGAGCCAAAGCACACCGATCCGGCGGCCATGCGCGGGGCGCACCACCGCCGGGCCAGATCTGAGGTCGCCTTCCGCCTGCCCGACGACCTCGACCTCGGCGGCGGCGGCGCGGGGGCGTTCGACGAGATCGGCTCCGAGGACGACCTCTTCTCCACCTTCATGGACATCGAGAAGATCTCCTCCGGCCCCGCCGCCGCGGGGGGCTCCGACCGGGACCGCGCCGCGGAGACGTCCTCGCCGCCGCGCCCCAAGCACCGCCACAGCAGCTCCGTCGACGGCTCCGGGTTCTTCGCCGCCGCGCGGAAGGACGCCGCCGCATCGCTGGCGGAGGTCATGGAGGCTAAGAAGGCCATGACCCCCGAGCAGCTCTCCGAGCTCGCCGCCATCGACCCCAAGCGCGCCAAAAGAATTCTGGCGAACAGACAATCTGCAGCTCGGTCAAAAGAGAGAAAAGCTCGTTACATAACAGAACTTGAGCGGAAGGTTCAAACTCTTCAGACTGAAGCCACTACTCTCTCAGCACAACTCACACTATTTCAGAGAGACACAACTGGGCTTTCTGCAGAAAATGCAGAGCTCAAGATACGGTTGCAGGCCATGGAACAACAGGCTCAACTGCGAGATGCTCTGAATGATGCACTAAAGCAGGAACTGGAGAGGCTTAAGCTCGCTACTGGTGAGATGACAAATTCCAATGAGACATATAGCATGGGACTGCAACATGTCCCATACAACACCCCTTTCTTCCCTCTCGCCCAGCATAATGCAGCCCGCCAGAACGGTGGAACCCAGTTGCCACCACAATTCCAACCACCCCGTCCTAATGTGCCCAATCACATGCTATCCCATCCAAACGGTTTGCAAGATATCATGCAGCAAGACCCTCTTGGCCGGCTTCAGGGTTTGGACATCAGCAAAGGGCCTCTAGTTGTGAAATCAGAGAGCAGCTCGATCTCTGCAAGTGAAAGCAGCAGCACCTTCTAACCAGGCCTACCCACCGAGCCCACAGTTCCATTAGATTCGTTTGTTCATAGCCTGACATCCTCGCGCTGCTCCCTGTTCTGGCACCAGGACTGGCTTTCTCCGAGAATACTGTGTTCTTTGTGGTCGTGTGGACTTGTTCACCATGGATTCAATTCAACCTTTTGAAAAGATGCATGTATTCTCTGATTTTTTTTTCTCAGTCATGTACATGTCACTGTTATGCTAGTTTGATTGATGTGTACTGTGGAATTTGTGGATAACAAAAGGAGTTAAGATTGGGATTGCTGTGGAACCATCTGTATCGTATATTCGTATGTGACTAATGTTGGGAAATTGTTCTATTCTTGTTCACCATATGCATGTGGGGTAACTTTTCC
CDS Sequence
- >LOC_Os03g21800.2
ATGCAGGAGCCAAAGCACACCGATCCGGCGGCCATGCGCGGGGCGCACCACCGCCGGGCCAGATCTGAGGTCGCCTTCCGCCTGCCCGACGACCTCGACCTCGGCGGCGGCGGCGCGGGGGCGTTCGACGAGATCGGCTCCGAGGACGACCTCTTCTCCACCTTCATGGACATCGAGAAGATCTCCTCCGGCCCCGCCGCCGCGGGGGGCTCCGACCGGGACCGCGCCGCGGAGACGTCCTCGCCGCCGCGCCCCAAGCACCGCCACAGCAGCTCCGTCGACGGCTCCGGGTTCTTCGCCGCCGCGCGGAAGGACGCCGCCGCATCGCTGGCGGAGGTCATGGAGGCTAAGAAGGCCATGACCCCCGAGCAGCTCTCCGAGCTCGCCGCCATCGACCCCAAGCGCGCCAAAAGAATTCTGGCGAACAGACAATCTGCAGCTCGGTCAAAAGAGAGAAAAGCTCGTTACATAACAGAACTTGAGCGGAAGGTTCAAACTCTTCAGACTGAAGCCACTACTCTCTCAGCACAACTCACACTATTTCAGAGAGACACAACTGGGCTTTCTGCAGAAAATGCAGAGCTCAAGATACGGTTGCAGGCCATGGAACAACAGGCTCAACTGCGAGATGCTCTGAATGATGCACTAAAGCAGGAACTGGAGAGGCTTAAGCTCGCTACTGGTGAGATGACAAATTCCAATGAGACATATAGCATGGGACTGCAACATGTCCCATACAACACCCCTTTCTTCCCTCTCGCCCAGCATAATGCAGCCCGCCAGAACGGTGGAACCCAGTTGCCACCACAATTCCAACCACCCCGTCCTAATGTGCCCAATCACATGCTATCCCATCCAAACGGTTTGCAAGATATCATGCAGCAAGACCCTCTTGGCCGGCTTCAGGGTTTGGACATCAGCAAAGGGCCTCTAGTTGTGAAATCAGAGAGCAGCTCGATCTCTGCAAGTGAAAGCAGCAGCACCTTCTAA - >LOC_Os03g21800.1
ATGCAGGAGCCAAAGCACACCGATCCGGCGGCCATGCGCGGGGCGCACCACCGCCGGGCCAGATCTGAGGTCGCCTTCCGCCTGCCCGACGACCTCGACCTCGGCGGCGGCGGCGCGGGGGCGTTCGACGAGATCGGCTCCGAGGACGACCTCTTCTCCACCTTCATGGACATCGAGAAGATCTCCTCCGGCCCCGCCGCCGCGGGGGGCTCCGACCGGGACCGCGCCGCGGAGACGTCCTCGCCGCCGCGCCCCAAGCACCGCCACAGCAGCTCCGTCGACGGCTCCGGGTTCTTCGCCGCCGCGCGGAAGGACGCCGCCGCATCGCTGGCGGAGGTCATGGAGGCTAAGAAGGCCATGACCCCCGAGCAGCTCTCCGAGCTCGCCGCCATCGACCCCAAGCGCGCCAAAAGAATTCTGGCGAACAGACAATCTGCAGCTCGGTCAAAAGAGAGAAAAGCTCGTTACATAACAGAACTTGAGCGGAAGGTTCAAACTCTTCAGACTGAAGCCACTACTCTCTCAGCACAACTCACACTATTTCAGAGAGACACAACTGGGCTTTCTGCAGAAAATGCAGAGCTCAAGATACGGTTGCAGGCCATGGAACAACAGGCTCAACTGCGAGATGCTCTGAATGATGCACTAAAGCAGGAACTGGAGAGGCTTAAGCTCGCTACTGGTGAGATGACAAATTCCAATGAGACATATAGCATGGGACTGCAACATGTCCCATACAACACCCCTTTCTTCCCTCTCGCCCAGCATAATGCAGCCCGCCAGAACGGTGGAACCCAGTTGCCACCACAATTCCAACCACCCCGTCCTAATGTGCCCAATCACATGCTATCCCATCCAAACGGTTTGCAAGATATCATGCAGCAAGACCCTCTTGGCCGGCTTCAGGGTTTGGACATCAGCAAAGGGCCTCTAGTTGTGAAATCAGAGAGCAGCTCGATCTCTGCAAGTGAAAGCAGCAGCACCTTCTAA
Protein Sequence
- >LOC_Os03g21800.2
MQEPKHTDPAAMRGAHHRRARSEVAFRLPDDLDLGGGGAGAFDEIGSEDDLFSTFMDIEKISSGPAAAGGSDRDRAAETSSPPRPKHRHSSSVDGSGFFAAARKDAAASLAEVMEAKKAMTPEQLSELAAIDPKRAKRILANRQSAARSKERKARYITELERKVQTLQTEATTLSAQLTLFQRDTTGLSAENAELKIRLQAMEQQAQLRDALNDALKQELERLKLATGEMTNSNETYSMGLQHVPYNTPFFPLAQHNAARQNGGTQLPPQFQPPRPNVPNHMLSHPNGLQDIMQQDPLGRLQGLDISKGPLVVKSESSSISASESSSTF* - >LOC_Os03g21800.1
MQEPKHTDPAAMRGAHHRRARSEVAFRLPDDLDLGGGGAGAFDEIGSEDDLFSTFMDIEKISSGPAAAGGSDRDRAAETSSPPRPKHRHSSSVDGSGFFAAARKDAAASLAEVMEAKKAMTPEQLSELAAIDPKRAKRILANRQSAARSKERKARYITELERKVQTLQTEATTLSAQLTLFQRDTTGLSAENAELKIRLQAMEQQAQLRDALNDALKQELERLKLATGEMTNSNETYSMGLQHVPYNTPFFPLAQHNAARQNGGTQLPPQFQPPRPNVPNHMLSHPNGLQDIMQQDPLGRLQGLDISKGPLVVKSESSSISASESSSTF*