Gene Details:
- MSU gene ID: LOC_Os03g21370
- RAPdb gene ID: Os03g0331600
- Gene Symbol: CS3
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- DAB staining and H2O2 content measurement showed that there was excessive H2O2 accumulation in the CS3 mutant leaf.
- Accompanying the chlorophyll deficiency, the chloroplasts in CS3 leaf cells were abnormal.
- The CS3 mutant seedlings exhibit a yellowish phenotype at germination, and they do not survive at the seedling stage.
- CS3 is mainly expressed in green tissues and the S136 F would influence CS3 interacting with YGL8 and its chloroplast localization.
- qRT-PCR analysis revealed the changes in the expression of genes involved in chlorophyll biosynthesis and degradation, chloroplast development, senescence, and photosynthesis in the CS3 mutant.
- In this study, we isolated and characterized a chlorophyll-deficient mutant, which we named CS3 (chlorotic seedling 3).
- Using a map-based cloning strategy, we mapped the CS3 gene, which encodes a Ycf54 domain-containing protein, to a locus on chromosome 3.
Function-related keywords:
- leaf , seedlings , chloroplast , seedling , map-based-cloning , photosynthesis , chloroplast-development
Literature:
- CS3, a Ycf54 domain-containing protein, affects chlorophyll biosynthesis in rice (Oryza sativa L.) . DOI: 10.1016/j.plantsci.2019.01.022 ; PMID: 31128680
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os03g21370.1
CAGAGATAAGGCTAAAGCTCACCGTCCATCGTCGTCCTCCGACCTCAAGCCCCCTCTCCGAGCTGACACGACCAGCTTCAGCACTTCAGTTCGGCTCCGTCCCCGAGTTCGGCAGCCGAGGCGAGTGGGGCAATGGTGGCTCCCGCGACGCTGTCCCTCCGCCCCTTCGCGACCCTCGCGCCGTCCCGCGCCGCGCTGCCCCGCGTCGGCGCCGGGTTCGCGCTCCCGCCCGCCGTCTCGTGCCAGCCGAGGCGGCGGCGCCTGTCGCTCCGCGCCGTGGCCGTCGACTCCGACCAGCAGGGCTCCCCCGAGCCTCCCGATCAGGAGGCGAAGCCGAAGAAGTACCACTTCCTGGTGGCGAACGCCAAGTTCATGCTGGACGAGGAGGAGCACTTCCAGGAGCAGCTGAAGGAGAAGCTGCGGCTCTACGGGGAGCGGGAGAAGGAGCAGGACTTCTGGCTGGTGGTGGAGCCCAAGTTCCTCGACAGGTTCCCCAACATCACCAAGCGCCTCAAGCGCCCCGCCGTCGCGCTCGTCTCCACCGACGGCAACTGGATCACTTTTATGAAGTTGAGGCTAGACAGGGTCTTAGCAGAACAATTTGAAGCAGAAACGCTTGAGGAGGCATTGGCTTCTAACCCGGTCGACTTGAAATTTGACAAGCCTGAGAAATGGACAGCTCCATACCCCAAGTATGAGTATGGATGGTGGGAGCCCTTTCTACCTCCAAAGTCTAGCAATGGAACAGCATAGAGATGATCGGCAATCCATATGAGCAATGTAAGATTTCTTCCATGCAAGTGCCCAAATGTAATCTAAATTTTTAACAATGCCTATGTAATACTTGGGGTGCTGTGAGTACAGTTAGCTACAATAGTTGCAGAGTTGCTGTACTTTCTGGTAATACCAGATAAGCAGTGGTTTTGTTTTGGAAGATTGTGGACGGCTGTGGTTGGGGTATAATTTTCTTCATGATGCACATTGCTGTCTATGTTGTAAATTTTATCACGGGAAAAATGCAGTCTTCCAGGTCCTATATAATTTCTGAACCACC
CDS Sequence
- >LOC_Os03g21370.1
ATGGTGGCTCCCGCGACGCTGTCCCTCCGCCCCTTCGCGACCCTCGCGCCGTCCCGCGCCGCGCTGCCCCGCGTCGGCGCCGGGTTCGCGCTCCCGCCCGCCGTCTCGTGCCAGCCGAGGCGGCGGCGCCTGTCGCTCCGCGCCGTGGCCGTCGACTCCGACCAGCAGGGCTCCCCCGAGCCTCCCGATCAGGAGGCGAAGCCGAAGAAGTACCACTTCCTGGTGGCGAACGCCAAGTTCATGCTGGACGAGGAGGAGCACTTCCAGGAGCAGCTGAAGGAGAAGCTGCGGCTCTACGGGGAGCGGGAGAAGGAGCAGGACTTCTGGCTGGTGGTGGAGCCCAAGTTCCTCGACAGGTTCCCCAACATCACCAAGCGCCTCAAGCGCCCCGCCGTCGCGCTCGTCTCCACCGACGGCAACTGGATCACTTTTATGAAGTTGAGGCTAGACAGGGTCTTAGCAGAACAATTTGAAGCAGAAACGCTTGAGGAGGCATTGGCTTCTAACCCGGTCGACTTGAAATTTGACAAGCCTGAGAAATGGACAGCTCCATACCCCAAGTATGAGTATGGATGGTGGGAGCCCTTTCTACCTCCAAAGTCTAGCAATGGAACAGCATAG
Protein Sequence
- >LOC_Os03g21370.1
MVAPATLSLRPFATLAPSRAALPRVGAGFALPPAVSCQPRRRRLSLRAVAVDSDQQGSPEPPDQEAKPKKYHFLVANAKFMLDEEEHFQEQLKEKLRLYGEREKEQDFWLVVEPKFLDRFPNITKRLKRPAVALVSTDGNWITFMKLRLDRVLAEQFEAETLEEALASNPVDLKFDKPEKWTAPYPKYEYGWWEPFLPPKSSNGTA*