Gene Details:

Functional Descriptions:

  • DAB staining and H2O2 content measurement showed that there was excessive H2O2 accumulation in the CS3 mutant leaf.
  • Accompanying the chlorophyll deficiency, the chloroplasts in CS3 leaf cells were abnormal.
  • The CS3 mutant seedlings exhibit a yellowish phenotype at germination, and they do not survive at the seedling stage.
  • CS3 is mainly expressed in green tissues and the S136 F would influence CS3 interacting with YGL8 and its chloroplast localization.
  • qRT-PCR analysis revealed the changes in the expression of genes involved in chlorophyll biosynthesis and degradation, chloroplast development, senescence, and photosynthesis in the CS3 mutant.
  • In this study, we isolated and characterized a chlorophyll-deficient mutant, which we named CS3 (chlorotic seedling 3).
  • Using a map-based cloning strategy, we mapped the CS3 gene, which encodes a Ycf54 domain-containing protein, to a locus on chromosome 3.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os03g21370.1
    CAGAGATAAGGCTAAAGCTCACCGTCCATCGTCGTCCTCCGACCTCAAGCCCCCTCTCCGAGCTGACACGACCAGCTTCAGCACTTCAGTTCGGCTCCGTCCCCGAGTTCGGCAGCCGAGGCGAGTGGGGCAATGGTGGCTCCCGCGACGCTGTCCCTCCGCCCCTTCGCGACCCTCGCGCCGTCCCGCGCCGCGCTGCCCCGCGTCGGCGCCGGGTTCGCGCTCCCGCCCGCCGTCTCGTGCCAGCCGAGGCGGCGGCGCCTGTCGCTCCGCGCCGTGGCCGTCGACTCCGACCAGCAGGGCTCCCCCGAGCCTCCCGATCAGGAGGCGAAGCCGAAGAAGTACCACTTCCTGGTGGCGAACGCCAAGTTCATGCTGGACGAGGAGGAGCACTTCCAGGAGCAGCTGAAGGAGAAGCTGCGGCTCTACGGGGAGCGGGAGAAGGAGCAGGACTTCTGGCTGGTGGTGGAGCCCAAGTTCCTCGACAGGTTCCCCAACATCACCAAGCGCCTCAAGCGCCCCGCCGTCGCGCTCGTCTCCACCGACGGCAACTGGATCACTTTTATGAAGTTGAGGCTAGACAGGGTCTTAGCAGAACAATTTGAAGCAGAAACGCTTGAGGAGGCATTGGCTTCTAACCCGGTCGACTTGAAATTTGACAAGCCTGAGAAATGGACAGCTCCATACCCCAAGTATGAGTATGGATGGTGGGAGCCCTTTCTACCTCCAAAGTCTAGCAATGGAACAGCATAGAGATGATCGGCAATCCATATGAGCAATGTAAGATTTCTTCCATGCAAGTGCCCAAATGTAATCTAAATTTTTAACAATGCCTATGTAATACTTGGGGTGCTGTGAGTACAGTTAGCTACAATAGTTGCAGAGTTGCTGTACTTTCTGGTAATACCAGATAAGCAGTGGTTTTGTTTTGGAAGATTGTGGACGGCTGTGGTTGGGGTATAATTTTCTTCATGATGCACATTGCTGTCTATGTTGTAAATTTTATCACGGGAAAAATGCAGTCTTCCAGGTCCTATATAATTTCTGAACCACC
CDS Sequence
  • >LOC_Os03g21370.1
    ATGGTGGCTCCCGCGACGCTGTCCCTCCGCCCCTTCGCGACCCTCGCGCCGTCCCGCGCCGCGCTGCCCCGCGTCGGCGCCGGGTTCGCGCTCCCGCCCGCCGTCTCGTGCCAGCCGAGGCGGCGGCGCCTGTCGCTCCGCGCCGTGGCCGTCGACTCCGACCAGCAGGGCTCCCCCGAGCCTCCCGATCAGGAGGCGAAGCCGAAGAAGTACCACTTCCTGGTGGCGAACGCCAAGTTCATGCTGGACGAGGAGGAGCACTTCCAGGAGCAGCTGAAGGAGAAGCTGCGGCTCTACGGGGAGCGGGAGAAGGAGCAGGACTTCTGGCTGGTGGTGGAGCCCAAGTTCCTCGACAGGTTCCCCAACATCACCAAGCGCCTCAAGCGCCCCGCCGTCGCGCTCGTCTCCACCGACGGCAACTGGATCACTTTTATGAAGTTGAGGCTAGACAGGGTCTTAGCAGAACAATTTGAAGCAGAAACGCTTGAGGAGGCATTGGCTTCTAACCCGGTCGACTTGAAATTTGACAAGCCTGAGAAATGGACAGCTCCATACCCCAAGTATGAGTATGGATGGTGGGAGCCCTTTCTACCTCCAAAGTCTAGCAATGGAACAGCATAG
Protein Sequence
  • >LOC_Os03g21370.1
    MVAPATLSLRPFATLAPSRAALPRVGAGFALPPAVSCQPRRRRLSLRAVAVDSDQQGSPEPPDQEAKPKKYHFLVANAKFMLDEEEHFQEQLKEKLRLYGEREKEQDFWLVVEPKFLDRFPNITKRLKRPAVALVSTDGNWITFMKLRLDRVLAEQFEAETLEEALASNPVDLKFDKPEKWTAPYPKYEYGWWEPFLPPKSSNGTA*