Information report for OsiEZ1;OsSET1
Gene Details
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Functional Descriptions
- Expression studies revealed that the OsiEZ1 transcript level was highest in rice flowers, almost undetectable in developing seeds of 1-2 days post-fertilization but increased significantly in young seeds of 3-5 days post-fertilization.
- The OsiEZ1 transcript was barely detectable in mature zygotic embryos, but its levels were significantly higher in callus derived from rice scutellum, somatic embryos and young seedlings.
- A POLYCOMB group gene of rice (Oryza sativa L. subspecies indica), OsiEZ1, codes for a nuclear-localized protein expressed preferentially in young seedlings and during reproductive development.
- Over-expression of the SET domain of OsSET1 in Arabidopsis resulted in altered shoot development at seedling stages.
- The expression of SDG711 and SDG718 is induced by LD and SD, respectively.
Functional Keywords
- seed , flower , seedling , shoot , reproductive , histone-trimethylation
Literature and News
- A POLYCOMB group gene of rice (Oryza sativa L. subspecies indica), OsiEZ1, codes for a nuclear-localized protein expressed preferentially in young seedlings and during reproductive development . DOI: 10.1016/s0378-1119(03)00723-6 ; PMID: 14527713
- Involvement of rice Polycomb protein OsFIE2 in plant growth and seed size . DOI: 10.1007/s11816-012-0229-0
- Expression, imprinting, and evolution of rice homologs of the polycomb group genes . DOI: 10.1093/mp/ssp036 ; PMID: 19825651
- OsSET1, a novel SET-domain-containing gene from rice . DOI: 10.1093/jxb/erg201 ; PMID: 12815033
- Transcriptional and post-transcriptional regulation of heading date in rice . DOI: 10.1111/nph.17158 ; PMID: 33341945
Gene Resources
- UniProt: Q10MI4
- EMBL: AF407010, AP008209, AP014959
- AlphaFoldDB: Q10MI4
- EnsemblPlants: Os03t0307800-01
- Gramene: Os03t0307800-01
- KEGG: dosa:Os03g0307800
- Orthologous matrix: DMCAGST
- InterPro: IPR001005, IPR001214, IPR025778
Homologs
- Setaria italica: SETIT_034160mg
- Setaria viridis: SEVIR_9G433200v2
- Triticum aestivum: TraesCS4B02G181400
- Zea mays: GRMZM2G043484
Sequences
cDNA Sequence
- >LOC_Os03g19480.1
CGGCGGGGTCTCATCCGATTGGAAACAGATTGGGAAGGGGGAGGGGGTAGGAATACGTGGCGTCGGCAGTATTAGGTAGAGAGAGAAACCCTTTCCATCCTTTGTCTCTTAGCCCCGAAGGAGAGAGAAAAATCAGAAAAAAAAAACCCTCCGCGTGTGGGGGAAGCAGAGCTCCGGACGCTGGCGCCGCTCGCGCCACCGCACCCGCACCGCCATGGCGTCGTCCTCGTCCAAGGCCTCCGATTCCTCTTCCCAACGCCCCAAGCGGCCGGATCAAGGGCCGTCGGGCAAGGACGCGGCCGGCCTCGTCGCGCTGCACGGGAAGCTGGCGCAGCTGAAGCGTCAGGTCCAATCCACCCGCCTCGCCGCGATCAAGGAGAGGGTGGAGGCGAACAGGAAGGCGCTGCAGGTGCACACGTGCGCTCTGTTCGACGTCGCCGCGGCGGCGGAGGTGGCGTCGCGGGGCGCCGAGGGCGGCAACGCGCTGTCGCGGGGCGCGGCGGAGGGGCACCGCAGGTTCGTGGGGTGGGACTCGGCGAGCGGGCCGGGGGAGAGGGAGTTGGTGCATGTGCAGGAGGAGAATCTGGTCGCCGGGACGCTCGTGCTCTCGAGCTCTGGTGGTAGCGGCGCCTCGCATAGGACCGTCGTGCAGCTTGTGAAGCTGCCTGTGGTCGACAAGATTCCGCCCTACACCACGTGGATCTTCCTGGACAAAAACCAAAGAATGGCCGATGATCAGTCAGTTGGTAGGAGGAGAATTTACTACGACCCAATTGTCAATGAGGCTCTGATCTGCAGTGAAAGTGACGATGATGTTCCAGAGCCAGAGGAAGAGAAACATGTTTTCACAGAAGGAGAAGATCAGCTAATATGGAAAGCTACTCAAGATCATGGGTTAAGTCGAGAGGTTTTAAATGTCCTCTGCCAGTTTGTTGATGCAACTCCTTCAGAAATTGAGGAAAGATCAGAAGTTCTTTTTGAGAAATATGAGAAGCAGTCTCAATCTTCTTACAAGACAGATTTGCAACTTTTTCTTGACAAGACCATGGATGTGGCTTTAGATTCTTTTGATAATCTCTTCTGTCGGAGATGTTTGGTTTTTGATTGCCGTCTCCATGGGTGCTCCCAGAACTTGGTATTCCCTAGCGAGAAGCAACCATATGGTCATGAACTTGATGAAAACAAGAGACCGTGTGGCGATCAGTGCTACCTTCGAAGGAGAGAAGTATATCAAGATACGTGCAATGATGACCGAAATGCTTGTACAACATATAATATGGATTCAAGATCTTCCTCACTCAAAGTTAGTGCTACCATATTGTCTGAATCAGAAGATTCAAACAGAGATGAAGATAACATCAAATCCACTTCTATTGTTGAAACCAGCAGATCAAAAATAACTAATTCTGAATATGCTGACAAAAGTGTGACACCACCTCCTGGAGATGCTTCTGAAACTGAAAATGTGTCCCCTGACATGCCCCTAAGAACTTTAGGCAGGCGTAAGATTTCAAAGCATGCCTCCAAGTCTAACGATCATTCACCTGATAAAAGGCAGAAGATATATAGCTCACCGTTTCCTTTTGCAATGAGTGTACTGAACAAGCAATCTGTTCCAGAAATTGGTGAGACATGTCCAGATTCCATAGAATCTGCAGTTGATCAACTTCCAAGTCTGGATGACCCTAACAAGAAAATTTCTACCAAAGATATGTGTGCTGGAAGCACAACTAACACTACTGAAAATACATTACGAGATAATAATAATAATTTGTTCATCTCCAACAAGGAGCACTCTATTTCTCATTGGAGTGCTTTAGAGAGAGATTTGTACTTGAAGGGAATTGAGATATTTGGGAAAAACAGTTGTCTCATAGCTAGAAACCTATTGTCTGGCCTGAAGACCTGCATGGAAGTGGCCAGCTACATGTACAACAATGGTGCGGCAATGGCAAAGAGACCTCTATCTGGTAAATCCATTTTAGGTGACTTTGCAGAGGCTGAACAAGGTTACATGGAGCAAGATTTGGTGGCAAGGACAAGAATCTGTCGTCGTAAGGGCCGAGCTCGAAAGCTCAAATACACTTGGAAGTCTGCAGGGCATCCAACTGTAAGAAAAAGAATCGGTGATGGAAAGCAATGGTACACTCAGTATAACCCATGTGGGTGTCAGCAAATGTGTGGCAAAGATTGCGCCTGTGTGGAAAATGGAACTTGTTGCGAGAAGTACTGCGGGTGCTCAAAGAGCTGCAAAAATAGGTTTAGAGGATGTCATTGCGCAAAAAGTCAATGCAGAAGCAGACAGTGCCCGTGTTTTGCTGCCAGTCGTGAATGTGATCCAGATGTTTGCAGAAACTGCTGGGTGAGCTGCGGAGATGGCTCACTAGGTGAGCCACTGGCAAGAGGTGATGGCTATCAGTGTGGAAACATGAAACTCCTCTTAAAACAACAACAACGTATATTGCTTGGAAAATCTGATGTTGCGGGTTGGGGTGCATTCATTAAGAACCCAGTAAATAGAAATGATTACCTTGGTGAATACACTGGCGAATTGATTTCTCATAGAGAAGCAGATAAGCGTGGCAAAATATATGATCGAGCAAATTCATCGTTCCTATTTGATTTAAATGAGCAGTATGTACTGGATGCTTATCGCAAGGGGGATAAACTGAAGTTTGCAAATCACTCGTCGAATCCTAACTGCTATGCGAAGGTTATGTTGGTGGCTGGCGATCATCGAGTTGGTATCTATGCAAAGGACCGCATTGAGGCTAGCGAGGAACTCTTTTATGATTACCGCTATGGACCTGACCAAGCCCCAGCTTGGGCTAGGAGACCGGAAGGGTCAAAAAAGGATGAAGCATCTGTCTCTCACCACCGAGCGCACAAAGTTGCTAGATAGTCCAACAGCAGCTCCAGATGATAATATCAACTGTAAATTATACCGTCATTGAAACACATAGTTCAATCCTAGTCCATTATACGGCCAATCGTTGGCATAATAAGCATATTCTATATTCCTTAGTTCCTTGGTAAATAAACTGAGATATCGAGTATGCGAATAAAAGAAAAATAAGGCACTGTAAGTTTATTTGTACAAAGTTTGGAATTTATGCTATGTATAGTTTTGCCTGTACTCTGACATTGATTCTACTCCCTCCGTCTCCATATTATAAGGAATTTTGGGTAACTACTAGAATATGTCACATCTACCCAAAATCCCTTATAATATGGGATATGTCACATCCACCCAAAATCCCTTATAATATGGATCCACCCAAAATCCCTTATAATATGGAACAGAGGGAGTACAATATTAGGCATATGAATCTTTATA
CDS Sequence
- >LOC_Os03g19480.1
ATGGCGTCGTCCTCGTCCAAGGCCTCCGATTCCTCTTCCCAACGCCCCAAGCGGCCGGATCAAGGGCCGTCGGGCAAGGACGCGGCCGGCCTCGTCGCGCTGCACGGGAAGCTGGCGCAGCTGAAGCGTCAGGTCCAATCCACCCGCCTCGCCGCGATCAAGGAGAGGGTGGAGGCGAACAGGAAGGCGCTGCAGGTGCACACGTGCGCTCTGTTCGACGTCGCCGCGGCGGCGGAGGTGGCGTCGCGGGGCGCCGAGGGCGGCAACGCGCTGTCGCGGGGCGCGGCGGAGGGGCACCGCAGGTTCGTGGGGTGGGACTCGGCGAGCGGGCCGGGGGAGAGGGAGTTGGTGCATGTGCAGGAGGAGAATCTGGTCGCCGGGACGCTCGTGCTCTCGAGCTCTGGTGGTAGCGGCGCCTCGCATAGGACCGTCGTGCAGCTTGTGAAGCTGCCTGTGGTCGACAAGATTCCGCCCTACACCACGTGGATCTTCCTGGACAAAAACCAAAGAATGGCCGATGATCAGTCAGTTGGTAGGAGGAGAATTTACTACGACCCAATTGTCAATGAGGCTCTGATCTGCAGTGAAAGTGACGATGATGTTCCAGAGCCAGAGGAAGAGAAACATGTTTTCACAGAAGGAGAAGATCAGCTAATATGGAAAGCTACTCAAGATCATGGGTTAAGTCGAGAGGTTTTAAATGTCCTCTGCCAGTTTGTTGATGCAACTCCTTCAGAAATTGAGGAAAGATCAGAAGTTCTTTTTGAGAAATATGAGAAGCAGTCTCAATCTTCTTACAAGACAGATTTGCAACTTTTTCTTGACAAGACCATGGATGTGGCTTTAGATTCTTTTGATAATCTCTTCTGTCGGAGATGTTTGGTTTTTGATTGCCGTCTCCATGGGTGCTCCCAGAACTTGGTATTCCCTAGCGAGAAGCAACCATATGGTCATGAACTTGATGAAAACAAGAGACCGTGTGGCGATCAGTGCTACCTTCGAAGGAGAGAAGTATATCAAGATACGTGCAATGATGACCGAAATGCTTGTACAACATATAATATGGATTCAAGATCTTCCTCACTCAAAGTTAGTGCTACCATATTGTCTGAATCAGAAGATTCAAACAGAGATGAAGATAACATCAAATCCACTTCTATTGTTGAAACCAGCAGATCAAAAATAACTAATTCTGAATATGCTGACAAAAGTGTGACACCACCTCCTGGAGATGCTTCTGAAACTGAAAATGTGTCCCCTGACATGCCCCTAAGAACTTTAGGCAGGCGTAAGATTTCAAAGCATGCCTCCAAGTCTAACGATCATTCACCTGATAAAAGGCAGAAGATATATAGCTCACCGTTTCCTTTTGCAATGAGTGTACTGAACAAGCAATCTGTTCCAGAAATTGGTGAGACATGTCCAGATTCCATAGAATCTGCAGTTGATCAACTTCCAAGTCTGGATGACCCTAACAAGAAAATTTCTACCAAAGATATGTGTGCTGGAAGCACAACTAACACTACTGAAAATACATTACGAGATAATAATAATAATTTGTTCATCTCCAACAAGGAGCACTCTATTTCTCATTGGAGTGCTTTAGAGAGAGATTTGTACTTGAAGGGAATTGAGATATTTGGGAAAAACAGTTGTCTCATAGCTAGAAACCTATTGTCTGGCCTGAAGACCTGCATGGAAGTGGCCAGCTACATGTACAACAATGGTGCGGCAATGGCAAAGAGACCTCTATCTGGTAAATCCATTTTAGGTGACTTTGCAGAGGCTGAACAAGGTTACATGGAGCAAGATTTGGTGGCAAGGACAAGAATCTGTCGTCGTAAGGGCCGAGCTCGAAAGCTCAAATACACTTGGAAGTCTGCAGGGCATCCAACTGTAAGAAAAAGAATCGGTGATGGAAAGCAATGGTACACTCAGTATAACCCATGTGGGTGTCAGCAAATGTGTGGCAAAGATTGCGCCTGTGTGGAAAATGGAACTTGTTGCGAGAAGTACTGCGGGTGCTCAAAGAGCTGCAAAAATAGGTTTAGAGGATGTCATTGCGCAAAAAGTCAATGCAGAAGCAGACAGTGCCCGTGTTTTGCTGCCAGTCGTGAATGTGATCCAGATGTTTGCAGAAACTGCTGGGTGAGCTGCGGAGATGGCTCACTAGGTGAGCCACTGGCAAGAGGTGATGGCTATCAGTGTGGAAACATGAAACTCCTCTTAAAACAACAACAACGTATATTGCTTGGAAAATCTGATGTTGCGGGTTGGGGTGCATTCATTAAGAACCCAGTAAATAGAAATGATTACCTTGGTGAATACACTGGCGAATTGATTTCTCATAGAGAAGCAGATAAGCGTGGCAAAATATATGATCGAGCAAATTCATCGTTCCTATTTGATTTAAATGAGCAGTATGTACTGGATGCTTATCGCAAGGGGGATAAACTGAAGTTTGCAAATCACTCGTCGAATCCTAACTGCTATGCGAAGGTTATGTTGGTGGCTGGCGATCATCGAGTTGGTATCTATGCAAAGGACCGCATTGAGGCTAGCGAGGAACTCTTTTATGATTACCGCTATGGACCTGACCAAGCCCCAGCTTGGGCTAGGAGACCGGAAGGGTCAAAAAAGGATGAAGCATCTGTCTCTCACCACCGAGCGCACAAAGTTGCTAGATAG
Protein Sequence
- >LOC_Os03g19480.1
MASSSSKASDSSSQRPKRPDQGPSGKDAAGLVALHGKLAQLKRQVQSTRLAAIKERVEANRKALQVHTCALFDVAAAAEVASRGAEGGNALSRGAAEGHRRFVGWDSASGPGERELVHVQEENLVAGTLVLSSSGGSGASHRTVVQLVKLPVVDKIPPYTTWIFLDKNQRMADDQSVGRRRIYYDPIVNEALICSESDDDVPEPEEEKHVFTEGEDQLIWKATQDHGLSREVLNVLCQFVDATPSEIEERSEVLFEKYEKQSQSSYKTDLQLFLDKTMDVALDSFDNLFCRRCLVFDCRLHGCSQNLVFPSEKQPYGHELDENKRPCGDQCYLRRREVYQDTCNDDRNACTTYNMDSRSSSLKVSATILSESEDSNRDEDNIKSTSIVETSRSKITNSEYADKSVTPPPGDASETENVSPDMPLRTLGRRKISKHASKSNDHSPDKRQKIYSSPFPFAMSVLNKQSVPEIGETCPDSIESAVDQLPSLDDPNKKISTKDMCAGSTTNTTENTLRDNNNNLFISNKEHSISHWSALERDLYLKGIEIFGKNSCLIARNLLSGLKTCMEVASYMYNNGAAMAKRPLSGKSILGDFAEAEQGYMEQDLVARTRICRRKGRARKLKYTWKSAGHPTVRKRIGDGKQWYTQYNPCGCQQMCGKDCACVENGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAASRECDPDVCRNCWVSCGDGSLGEPLARGDGYQCGNMKLLLKQQQRILLGKSDVAGWGAFIKNPVNRNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNEQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIYAKDRIEASEELFYDYRYGPDQAPAWARRPEGSKKDEASVSHHRAHKVAR*