Gene Details:
- MSU gene ID: LOC_Os03g16570
- RAPdb gene ID: Os03g0272300
- Gene Symbol: OsSDIR1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Taking advantage of strategies in biochemistry, molecular cell biology and genetics, the RING-finger containing E3 ligase OsSDIR1 (Oryza sativa SALT-AND DROUGHT-INDUCED RING FINGER 1) was found to be a candidate drought tolerance gene for engineering of crop plants.
- Upon drought treatment, the OsSDIR1-transgenic rice showed strong drought tolerance compared to control plants.
- OsSDIR1 overexpression greatly improves drought tolerance in transgenic rice.
- The expression of OsSDIR1 was detected in all tissues of rice and up-regulated by drought and NaCl, but not by ABA.
- OsSDIR1 could complement the drought sensitive phenotype of the sdir1 mutant and overexpressing transgenic Arabidopsis were more sensitive to ABA, indicating that the OsSDIR1 gene is a functional ortholog of SDIR1.
Function-related keywords:
Literature:
- OsSDIR1 overexpression greatly improves drought tolerance in transgenic rice . DOI: 10.1007/s11103-011-9775-z ; PMID: 21499841
Related News:
Gene Resources:
- NCBI ID: AK060183
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os03g16570.3
ACTGCTCGCTCTCGTTTTCCCCATCCGCACCGGCTGCTCCTCGTCGCGCCGACGCCTCCGCGCGCCAGCGAATCGCCGCCTCGAGAGGCCCCTCGTCGCCGATCAGGGGCGTGGCCTCGTCGAGTTTTTTTGTTCCTCGGAGGGGCGGCAAGGAGGCGGATTTGGAGCAATTCGTAAGACTAGTGGTGGTGGTGGTGGTGGTGGCTGGTTGGCGCCATGAGCTTCGTGTTCCGGGGGAGCAGAGGTGACATCGAGGCCGGAGGCTTCCCGGGGTTCGCCCCGGAGCGCCGCGCCATGGTGAGCGTTTCTGCTTAAATCGGATTCATGCGGGTGGTCGGCCGGTGAACAGCAACCTGGCTTTTCTTGTCACTGTTCTTATGTTGTTCATGGTACTGAACTCACACCAGATGTCTCCGAACTTTTTGGTTTGGCTGGTTTTGGGTGTGTTCCTAATGGCCACCAGCCTAAGGATGTACGCCACATGCCAGCAGCTCCAAGCGCAGGCGCAAGCTCACGCTGCAGCTGCCAACGGCTTCCTTGGACACACTGAGCTGCGGGTGCATGTCCCGCCGACCATAGCTCTCGCCACACGAGGCCGTTTGCAGAGCCTTAGGCTCCAACTTGCGCTACTTGACCGCGAGTTCGATGATTTAGATTATGATGCCCTTAGGGCCTTGGATGCAGACAATAGCCCTCATGCTCCTTCGATGAGTGAAGAAGAAATAAATGCTCTTCCTGTATTCAAATACAAGGTTCAGGCACATCAGGGAAGTGCCTCTTTCCGAAAAAGTGATGGACCATCTCAACCATCTGTTTCTTCTACTGAATCTGGCAATGAGAAAAAGCAGGATCGTTTCAAGGCTGATGCAACTGACAACACCCTGGAGGATGAGTTGACATGCAGTGTTTGCTTAGAACAAGTCGTTGTGGGTGATCTATTGAGAAGCCTACCATGCCTGCACCAGTTTCATGCAAACTGCATCGATCCATGGTTGCGCCAACAGGGAACATGCCCAGTTTGCAAGCACCGTGTAAGCGATGGGTGGCATGGTGAAGCAGATGCTTCTAACATGGTATAAGCTGCTGGGAGTGGCCAGCAGGTCTTAAGCTAAAACTACTGACTTAACCCACGGAATGAGGATTAGCTGTTTAGTCTTGAGGAGTGTTTTTGTACATAAAAAAACGTTCACTTCTCTGTGATGTTTATGCATCAAAAGGTTGTGATATTTTTGGTTGACCTGTACCCTGTTCAGTATGAACTCACATACAATCCTTTTTACTCTGTTTCCGTGGGGAAATTGGCGTATTATGGGTGTTTAAGGCTGAAGATCAGTAGAGGATTTAAGATCCAAGAGTAGTGGTCTGGTCTCTATTAGTCTTAAGTAAAAATGATCTTAACTGTTAGTATTATCACAAGTAAAAAGGAGAAACTGATTTATGAGTTCTACCATCATTATATTTTTTTCCTTATTTAGGGCAATTAAGTTTTTGACTATTTTAAAGACTCTTAACTACTAATTTAGCTATGCTTCTATGAGTTTACTAATGTAGCCTCTATACTACGCGCACGCCAGCGTCCAAGCCGAGCAGCGATGCTGTGCACTCCCACTCGACGCGGTCGTGCTGCGACGCTTCAGCCTGGGCCTTGGATGGCAATTAGTCTGGGTTTCTTTTATGTTTCGACTGAATCATTTGTTTTGAACTCAAATATCCCGTATATGAACATCTGGGAAAAGGATAAAGAAATGGCGAT - >LOC_Os03g16570.2
ACTGCTCGCTCTCGTTTTCCCCATCCGCACCGGCTGCTCCTCGTCGCGCCGACGCCTCCGCGCGCCAGCGAATCGCCGCCTCGAGAGGCCCCTCGTCGCCGATCAGGGGCGTGGCCTCGTCGAGTTTTTTTGTTCCTCGGAGGGGCGGCAAGGAGGCGGATTTGGAGCAATTCGTAAGACTAGTGGTGGTGGTGGTGGTGGTGGCTGGTTGGCGCCATGAGCTTCGTGTTCCGGGGGAGCAGAGGTGACATCGAGGCCGGAGGCTTCCCGGGGTTCGCCCCGGAGCGCCGCGCCATGGTGAGCGTTTCTGCTTAAATCGGATTCATGCGGGTGGTCGGCCGGTGAACAGCAACCTGGCTTTTCTTGTCACTGTTCTTATGTTGTTCATGGTACTGAACTCACACCAGATGTCTCCGAACTTTTTGGTTTGGCTGGTTTTGGGTGTGTTCCTAATGGCCACCAGCCTAAGGATGTACGCCACATGCCAGCAGCTCCAAGCGCAGGCGCAAGCTCACGCTGCAGCTGCCAACGGCTTCCTTGGACACACTGAGCTGCGGGTGCATGTCCCGCCGACCATAGCTCTCGCCACACGAGGCCGTTTGCAGAGCCTTAGGCTCCAACTTGCGCTACTTGACCGCGAGTTCGATGATTTAGATTATGATGCCCTTAGGGCCTTGGATGCAGACAATAGCCCTCATGCTCCTTCGATGAGTGAAGAAGAAATAAATGCTCTTCCTGTATTCAAATACAAGGTTCAGGCACATCAGGGAAGTGCCTCTTTCCGAAAAAGTGATGGACCATCTCAACCATCTGTTTCTTCTACTGAATCTGGCAATGAGAAAAAGCAGGATCGTTTCAAGGCTGATGCAACTGACAACACCCTGGAGGATGAGTTGACATGCAGTGTTTGCTTAGAACAAGTCGTTGTGGGTGATCTATTGAGAAGCCTACCATGCCTGCACCAGTTTCATGCAAACTGCATCGATCCATGGTTGCGCCAACAGGGAACATGCCCAGTTTGCAAGCACCGTGTAAGCGATGGGTGGCATGGTGAAGCAGATGCTTCTAACATGGTATAAGCTGCTGGGAGTGGCCAGCAGGTCTTAAGCTAAAACTACTGACTTAACCCACGGAATGAGGATTAGCTGTTTAGTCTTGAGGAGTGTTTTTGTACATAAAAAAACGTTCACTTCTCTGTGATGTTTATGCATCAAAAGGTTGTGATATTTTTGGTTGACCTGTACCCTGTTCAGTATGAACTCACATACAATCCTTTTTACTCTGTTTCCGTGGGGAAATTGGCGTATTATGGGTGTTTAAGGCTGAAGATCAGTAGAGGATTTAAGATCCAAGAGTAGTGGTCTGGTCTCTATTAGTCTTAAGTAAAAATGATCTTAACTGTTAGTATTATCACAAGTAAAAAGGAGAAACTGATTTATGAGTTCTACCATCATTATATTTTTTTCCTTATTTAGGGCAATTAAGTTTTTGACTATTTTAAAGACTCTTAACTACTAATTTAGCTATGCTTCTATGAGTTTACTAATGTAGCCTCTATACTACGCGCACGCCAGCGTCCAAGCCGAGCAGCGATGCTGTGCACTCCCACTCGACGCGGTCGTGCTGCGACGCTTCAGCCTGGGCCTTGGATGGCAATTAGTCTGGGTTTCTTTTATGTTTCGACTGAATCATTTGTTTTGAACTCAAATATCCCGTATATGAACATCTGGGAAAAGGATAAAGAAATGGCGAT - >LOC_Os03g16570.1
ACTGCTCGCTCTCGTTTTCCCCATCCGCACCGGCTGCTCCTCGTCGCGCCGACGCCTCCGCGCGCCAGCGAATCGCCGCCTCGAGAGGCCCCTCGTCGCCGATCAGGGGCGTGGCCTCGTCGAGTTTTTTTGTTCCTCGGAGGGGCGGCAAGGAGGCGGATTTGGAGCAATTCGTAAGACTAGTGGTGGTGGTGGTGGTGGTGGCTGGTTGGCGCCATGAGCTTCGTGTTCCGGGGGAGCAGAGGTGACATCGAGGCCGGAGGCTTCCCGGGGTTCGCCCCGGAGCGCCGCGCCATGGTGAGCGTTTCTGCTTAAATCGGATTCATGCGGGTGGTCGGCCGGTGAACAGCAACCTGGCTTTTCTTGTCACTGTTCTTATGTTGTTCATGGTACTGAACTCACACCAGATGTCTCCGAACTTTTTGGTTTGGCTGGTTTTGGGTGTGTTCCTAATGGCCACCAGCCTAAGGATGTACGCCACATGCCAGCAGCTCCAAGCGCAGGCGCAAGCTCACGCTGCAGCTGCCAACGGCTTCCTTGGACACACTGAGCTGCGGGTGCATGTCCCGCCGACCATAGCTCTCGCCACACGAGGCCGTTTGCAGAGCCTTAGGCTCCAACTTGCGCTACTTGACCGCGAGTTCGATGATTTAGATTATGATGCCCTTAGGGCCTTGGATGCAGACAATAGCCCTCATGCTCCTTCGATGAGTGAAGAAGAAATAAATGCTCTTCCTGTATTCAAATACAAGGTTCAGGCACATCAGGGAAGTGCCTCTTTCCGAAAAAGTGATGGACCATCTCAACCATCTGTTTCTTCTACTGAATCTGGCAATGAGAAAAAGCAGGATCGTTTCAAGGCTGATGCAACTGACAACACCCTGGAGGATGAGTTGACATGCAGTGTTTGCTTAGAACAAGTCGTTGTGGGTGATCTATTGAGAAGCCTACCATGCCTGCACCAGTTTCATGCAAACTGCATCGATCCATGGTTGCGCCAACAGGGAACATGCCCAGTTTGCAAGCACCGTGTAAGCGATGGGTGGCATGGTGAAGCAGATGCTTCTAACATGGTATAAGCTGCTGGGAGTGGCCAGCAGGTCTTAAGCTAAAACTACTGACTTAACCCACGGAATGAGGATTAGCTGTTTAGTCTTGAGGAGTGTTTTTGTACATAAAAAAACGTTCACTTCTCTGTGATGTTTATGCATCAAAAGGTTGTGATATTTTTGGTTGACCTGTACCCTGTTCAGTATGAACTCACATACAATCCTTTTTACTCTGTTTCCGTGGGGAAATTGGCGTATTATGGGTGTTTAAGGCTGAAGATCAGTAGAGGATTTAAGATCCAAGAGTAGTGGTCTGGTCTCTATTAGTCTTAAGTAAAAATGATCTTAACTGTTAGTATTATCACAAGTAAAAAGGAGAAACTGATTTATGAGTTCTACCATCATTATATTTTTTTCCTTATTTAGGGCAATTAAGTTTTTGACTATTTTAAAGACTCTTAACTACTAATTTAGCTATGCTTCTATGAGTTTACTAATGTAGCCTCTATACTACGCGCACGCCAGCGTCCAAGCCGAGCAGCGATGCTGTGCACTCCCACTCGACGCGGTCGTGCTGCGACGCTTCAGCCTGGGCCTTGGATGGCAATTAGTCTGGGTTTCTTTTATGTTTCGACTGAATCATTTGTTTTGAACTCAAATATCCCGTATATGAACATCTGGGAAAAGGATAAAGAAATGGCGAT
CDS Sequence
- >LOC_Os03g16570.3
ATGTTGTTCATGGTACTGAACTCACACCAGATGTCTCCGAACTTTTTGGTTTGGCTGGTTTTGGGTGTGTTCCTAATGGCCACCAGCCTAAGGATGTACGCCACATGCCAGCAGCTCCAAGCGCAGGCGCAAGCTCACGCTGCAGCTGCCAACGGCTTCCTTGGACACACTGAGCTGCGGGTGCATGTCCCGCCGACCATAGCTCTCGCCACACGAGGCCGTTTGCAGAGCCTTAGGCTCCAACTTGCGCTACTTGACCGCGAGTTCGATGATTTAGATTATGATGCCCTTAGGGCCTTGGATGCAGACAATAGCCCTCATGCTCCTTCGATGAGTGAAGAAGAAATAAATGCTCTTCCTGTATTCAAATACAAGGTTCAGGCACATCAGGGAAGTGCCTCTTTCCGAAAAAGTGATGGACCATCTCAACCATCTGTTTCTTCTACTGAATCTGGCAATGAGAAAAAGCAGGATCGTTTCAAGGCTGATGCAACTGACAACACCCTGGAGGATGAGTTGACATGCAGTGTTTGCTTAGAACAAGTCGTTGTGGGTGATCTATTGAGAAGCCTACCATGCCTGCACCAGTTTCATGCAAACTGCATCGATCCATGGTTGCGCCAACAGGGAACATGCCCAGTTTGCAAGCACCGTGTAAGCGATGGGTGGCATGGTGAAGCAGATGCTTCTAACATGGTATAA - >LOC_Os03g16570.2
ATGTTGTTCATGGTACTGAACTCACACCAGATGTCTCCGAACTTTTTGGTTTGGCTGGTTTTGGGTGTGTTCCTAATGGCCACCAGCCTAAGGATGTACGCCACATGCCAGCAGCTCCAAGCGCAGGCGCAAGCTCACGCTGCAGCTGCCAACGGCTTCCTTGGACACACTGAGCTGCGGGTGCATGTCCCGCCGACCATAGCTCTCGCCACACGAGGCCGTTTGCAGAGCCTTAGGCTCCAACTTGCGCTACTTGACCGCGAGTTCGATGATTTAGATTATGATGCCCTTAGGGCCTTGGATGCAGACAATAGCCCTCATGCTCCTTCGATGAGTGAAGAAGAAATAAATGCTCTTCCTGTATTCAAATACAAGGTTCAGGCACATCAGGGAAGTGCCTCTTTCCGAAAAAGTGATGGACCATCTCAACCATCTGTTTCTTCTACTGAATCTGGCAATGAGAAAAAGCAGGATCGTTTCAAGGCTGATGCAACTGACAACACCCTGGAGGATGAGTTGACATGCAGTGTTTGCTTAGAACAAGTCGTTGTGGGTGATCTATTGAGAAGCCTACCATGCCTGCACCAGTTTCATGCAAACTGCATCGATCCATGGTTGCGCCAACAGGGAACATGCCCAGTTTGCAAGCACCGTGTAAGCGATGGGTGGCATGGTGAAGCAGATGCTTCTAACATGGTATAA - >LOC_Os03g16570.1
ATGTTGTTCATGGTACTGAACTCACACCAGATGTCTCCGAACTTTTTGGTTTGGCTGGTTTTGGGTGTGTTCCTAATGGCCACCAGCCTAAGGATGTACGCCACATGCCAGCAGCTCCAAGCGCAGGCGCAAGCTCACGCTGCAGCTGCCAACGGCTTCCTTGGACACACTGAGCTGCGGGTGCATGTCCCGCCGACCATAGCTCTCGCCACACGAGGCCGTTTGCAGAGCCTTAGGCTCCAACTTGCGCTACTTGACCGCGAGTTCGATGATTTAGATTATGATGCCCTTAGGGCCTTGGATGCAGACAATAGCCCTCATGCTCCTTCGATGAGTGAAGAAGAAATAAATGCTCTTCCTGTATTCAAATACAAGGTTCAGGCACATCAGGGAAGTGCCTCTTTCCGAAAAAGTGATGGACCATCTCAACCATCTGTTTCTTCTACTGAATCTGGCAATGAGAAAAAGCAGGATCGTTTCAAGGCTGATGCAACTGACAACACCCTGGAGGATGAGTTGACATGCAGTGTTTGCTTAGAACAAGTCGTTGTGGGTGATCTATTGAGAAGCCTACCATGCCTGCACCAGTTTCATGCAAACTGCATCGATCCATGGTTGCGCCAACAGGGAACATGCCCAGTTTGCAAGCACCGTGTAAGCGATGGGTGGCATGGTGAAGCAGATGCTTCTAACATGGTATAA
Protein Sequence
- >LOC_Os03g16570.3
MLFMVLNSHQMSPNFLVWLVLGVFLMATSLRMYATCQQLQAQAQAHAAAANGFLGHTELRVHVPPTIALATRGRLQSLRLQLALLDREFDDLDYDALRALDADNSPHAPSMSEEEINALPVFKYKVQAHQGSASFRKSDGPSQPSVSSTESGNEKKQDRFKADATDNTLEDELTCSVCLEQVVVGDLLRSLPCLHQFHANCIDPWLRQQGTCPVCKHRVSDGWHGEADASNMV* - >LOC_Os03g16570.2
MLFMVLNSHQMSPNFLVWLVLGVFLMATSLRMYATCQQLQAQAQAHAAAANGFLGHTELRVHVPPTIALATRGRLQSLRLQLALLDREFDDLDYDALRALDADNSPHAPSMSEEEINALPVFKYKVQAHQGSASFRKSDGPSQPSVSSTESGNEKKQDRFKADATDNTLEDELTCSVCLEQVVVGDLLRSLPCLHQFHANCIDPWLRQQGTCPVCKHRVSDGWHGEADASNMV* - >LOC_Os03g16570.1
MLFMVLNSHQMSPNFLVWLVLGVFLMATSLRMYATCQQLQAQAQAHAAAANGFLGHTELRVHVPPTIALATRGRLQSLRLQLALLDREFDDLDYDALRALDADNSPHAPSMSEEEINALPVFKYKVQAHQGSASFRKSDGPSQPSVSSTESGNEKKQDRFKADATDNTLEDELTCSVCLEQVVVGDLLRSLPCLHQFHANCIDPWLRQQGTCPVCKHRVSDGWHGEADASNMV*