Information report for OsATG6b
Gene Details
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Functional Descriptions
Literature and News
- Regulation of ATG6/Beclin-1 homologs by abiotic stresses and hormones in rice (Oryza sativa L.) . DOI: 10.4238/2012.August.17.3 ; PMID: 22930426
- Genome-wide identification, classification, and expression analysis of autophagy-associated gene homologues in rice (Oryza sativa L.) . DOI: 10.1093/dnares/dsr024 ; PMID: 21795261
Gene Resources
- UniProt: A0A8J8XZB4
- EMBL: AP008209, CM000140
- EnsemblPlants: Os03t0258500-01
- Gramene: Os03t0258500-01
- KEGG: dosa:Os03g0258500
- Orthologous matrix: EWDVYKA
- InterPro: IPR007243, IPR038274, IPR040455
- PANTHER: PTHR12768, PTHR12768:SF4
- Gene3D: 1.10.418.40, 6.10.250.3110
- OrthoDB: A0A8J8XZB4
- SWISS-MODEL: A0A8J8XZB4
Sequences
cDNA Sequence
- >LOC_Os03g15290.1
ATGTCAGTGACTGTTTGCTCCTGCGACGACGAATCTGTGCCGACCTTGTTTCACCGCCTCCGCCTCCGATTCGACCTCCGCGGCCGCCATGAAATTGGAGCTTCCGGGAGGAGGAAATCTCGAGAAGTAGAGAGAGAAGACCACAGCGTGGGCGAGCGCGTCGGCGTCATTGATTCCGGCGACATGAAGCCCCCCGCCGCGGCCGCGGCCGGCAACAGGGCTGGTGGGGTGGATCCGTCGATACCGCGGTTCAAGTGCCAGGAGTGCCACCGCGCGCTCGTCGTCGTCGGCGTGGACTCCTTCGCCGCCGATAAGCTCCCGGCTCAGGCCACCTCTGGGCATGTATCCTCTGTTCATGGAAGTATTATGGGAGCTAGCAGGATGGATAATTCTTATGTCGTGCTATCCAAGCAAAACAAATCTCATGGCCATGGAATTCCCCCACGCCCACCGAGTGCAGCAGCCCCACATATCGAACCTAACCAGCCAACAAGAGCGATGGAGGGTTCATATATAGTGCTTCCACCTGCTGCTGCTTCCATATACAAGACATCTACTTCTGAAGGAGGTGGTGCGCAGTTGCCACCACCAAGTATCAATTCCAGCAGTTTGTTAACAGGAAATAGTTTTCACTCTAACGTGACTGTATTAAAACGGGCATTTGAGATTGCTACGTCACAAACTCAGGTTGAGCAGCCAATGTGTCTGGGCTGTATGAGGTTGCTCTCTGATAAGATGGATAAGGAGATTGAAGATGTTAATGCTGACATTAAAGCTCATGAAGTTTGTCTTCAACATTTGGAGCAGGAATCCTACAATGTCCTCAGCGATGCTGGTTTTCAGGAGGAGAAACTGAAGATTGAAGAAGAAGAAAAGAAGCTTAACGCTGCTATTGAAGAAGCTGAAAAGCAATATTCAGAAATTAGTTCTGAGATGAAGGATCTTGAAATAAAATCTAAAGAATTTGAAGAATTGGAAGAAAGGTATTGGCATGAATTCAATAGCTTTCAGTTTCAGTTGACATCTCACCAGGAAGAAAGAGAAGCAATTTTGGCAAAAATAGAAGTTTCACAGGTTCATCTGGAATTGCTGAAGCGAAGAAATGTTCTCAATGATGCATTCTATATTTCACATGATGGAGTAATTGGAACAATAAACAACTTCCGACTCGGACGCCTTCCTAATGTACAGGTTGAATGGGATGAGATAAATGCTGCTTGGGGTCAGGCTGCTCTTCTTTTGCATACCATGGCTCAGTACTTCACCCCAAAATTTGAGTACCGGATTAAGATTCATCCTATGGGTAGCTACGCAAGAGTCACAGATATCCACAAAAATACATATGAACTTTATATCATGCTAACCAGGTTTGGTCCCGTGGATTTATTCTGGAGCACACGTTTTGACAAAGCCATGACATGGTTTCTGACCTGCCTGCAAGATTTTGCTGAGTTCGCTATTAGCTTGGATAAAGAGAACAATGTACCACCTGAGAAGTCATTAAAGCTCCCATACAAGATTGATGGTGACAAGGTAGGGAGCCACACAATCTTCTTAAGTTTTAATAAAGTGGAGAACTGGACGAAAGCACTAAAATACACGTTGTGCAACTTGAAGTGGGTCCTCTACTGA
CDS Sequence
- >LOC_Os03g15290.1
ATGTCAGTGACTGTTTGCTCCTGCGACGACGAATCTGTGCCGACCTTGTTTCACCGCCTCCGCCTCCGATTCGACCTCCGCGGCCGCCATGAAATTGGAGCTTCCGGGAGGAGGAAATCTCGAGAAGTAGAGAGAGAAGACCACAGCGTGGGCGAGCGCGTCGGCGTCATTGATTCCGGCGACATGAAGCCCCCCGCCGCGGCCGCGGCCGGCAACAGGGCTGGTGGGGTGGATCCGTCGATACCGCGGTTCAAGTGCCAGGAGTGCCACCGCGCGCTCGTCGTCGTCGGCGTGGACTCCTTCGCCGCCGATAAGCTCCCGGCTCAGGCCACCTCTGGGCATGTATCCTCTGTTCATGGAAGTATTATGGGAGCTAGCAGGATGGATAATTCTTATGTCGTGCTATCCAAGCAAAACAAATCTCATGGCCATGGAATTCCCCCACGCCCACCGAGTGCAGCAGCCCCACATATCGAACCTAACCAGCCAACAAGAGCGATGGAGGGTTCATATATAGTGCTTCCACCTGCTGCTGCTTCCATATACAAGACATCTACTTCTGAAGGAGGTGGTGCGCAGTTGCCACCACCAAGTATCAATTCCAGCAGTTTGTTAACAGGAAATAGTTTTCACTCTAACGTGACTGTATTAAAACGGGCATTTGAGATTGCTACGTCACAAACTCAGGTTGAGCAGCCAATGTGTCTGGGCTGTATGAGGTTGCTCTCTGATAAGATGGATAAGGAGATTGAAGATGTTAATGCTGACATTAAAGCTCATGAAGTTTGTCTTCAACATTTGGAGCAGGAATCCTACAATGTCCTCAGCGATGCTGGTTTTCAGGAGGAGAAACTGAAGATTGAAGAAGAAGAAAAGAAGCTTAACGCTGCTATTGAAGAAGCTGAAAAGCAATATTCAGAAATTAGTTCTGAGATGAAGGATCTTGAAATAAAATCTAAAGAATTTGAAGAATTGGAAGAAAGGTATTGGCATGAATTCAATAGCTTTCAGTTTCAGTTGACATCTCACCAGGAAGAAAGAGAAGCAATTTTGGCAAAAATAGAAGTTTCACAGGTTCATCTGGAATTGCTGAAGCGAAGAAATGTTCTCAATGATGCATTCTATATTTCACATGATGGAGTAATTGGAACAATAAACAACTTCCGACTCGGACGCCTTCCTAATGTACAGGTTGAATGGGATGAGATAAATGCTGCTTGGGGTCAGGCTGCTCTTCTTTTGCATACCATGGCTCAGTACTTCACCCCAAAATTTGAGTACCGGATTAAGATTCATCCTATGGGTAGCTACGCAAGAGTCACAGATATCCACAAAAATACATATGAACTTTATATCATGCTAACCAGGTTTGGTCCCGTGGATTTATTCTGGAGCACACGTTTTGACAAAGCCATGACATGGTTTCTGACCTGCCTGCAAGATTTTGCTGAGTTCGCTATTAGCTTGGATAAAGAGAACAATGTACCACCTGAGAAGTCATTAAAGCTCCCATACAAGATTGATGGTGACAAGGTAGGGAGCCACACAATCTTCTTAAGTTTTAATAAAGTGGAGAACTGGACGAAAGCACTAAAATACACGTTGTGCAACTTGAAGTGGGTCCTCTACTGA
Protein Sequence
- >LOC_Os03g15290.1
MSVTVCSCDDESVPTLFHRLRLRFDLRGRHEIGASGRRKSREVEREDHSVGERVGVIDSGDMKPPAAAAAGNRAGGVDPSIPRFKCQECHRALVVVGVDSFAADKLPAQATSGHVSSVHGSIMGASRMDNSYVVLSKQNKSHGHGIPPRPPSAAAPHIEPNQPTRAMEGSYIVLPPAAASIYKTSTSEGGGAQLPPPSINSSSLLTGNSFHSNVTVLKRAFEIATSQTQVEQPMCLGCMRLLSDKMDKEIEDVNADIKAHEVCLQHLEQESYNVLSDAGFQEEKLKIEEEEKKLNAAIEEAEKQYSEISSEMKDLEIKSKEFEELEERYWHEFNSFQFQLTSHQEEREAILAKIEVSQVHLELLKRRNVLNDAFYISHDGVIGTINNFRLGRLPNVQVEWDEINAAWGQAALLLHTMAQYFTPKFEYRIKIHPMGSYARVTDIHKNTYELYIMLTRFGPVDLFWSTRFDKAMTWFLTCLQDFAEFAISLDKENNVPPEKSLKLPYKIDGDKVGSHTIFLSFNKVENWTKALKYTLCNLKWVLY*