Gene Details:
- MSU gene ID: LOC_Os03g14310
- RAPdb gene ID: Os03g0247300
- Gene Symbol: Sc
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Here we show that structural changes and copy number variation at the Sc locus confer japonica-indica hybrid male sterility.
Function-related keywords:
Literature:
- Genomic structural variation-mediated allelic suppression causes hybrid male sterility in rice . DOI: 10.1038/s41467-017-01400-y ; PMID: 29101356
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os03g14310.1
TACTCCCCTCCACCCAGGCGCAAATCATCCGCCATGGCTCCCGCCTGGGTCTTGCTCGATCGCGTCGTCAAGCCCGCCGTCTTCGACGAAGAAGAGAGCAAAGGTAAGGGAGAATCGACCGGCGCCCCAGTGAAGTACCTGCCAGCCAGATTAAGGCAGGAAGTCCCCGCCGGCATGCGGGACGTGAAGCCCTACCCAGAGGTTGCGGATCCTCCCATTATATCTCGCTTCTCCATGCTGATTTCGCGGAAGGCGATCAGGGTAGTGAAATCCGTCCGTGTCCGGTGCGCCGACAAGAGCCTTGTCTTGTTCTACGCCGGCACCGGCTTCCCCGGCTTCTCGTCCCACGGCTGCCACCTGATCTACGACGCCATCGACGGCTCTCTCACTGCGGTGCACACATTCCCCTTTCCTGTGTCCGGAGTCGTCTGGGTCGGCAGAGCCGCTGTCCTGCGCCATGCCGGCGGCGGAGGAGGAGGAGGAGACGGTACTACCGCCTCCTATGTCATCGCCGAGCTGCTCAGGCCGTTTCATGGCTCCCTTCCCGATGCCACGCTCGTGATGTGGTTGTCGAATTCCCCCGCGTCGACCTCCGGCAGCAACGGCCAATGGGTGAAGGAGGACGTTCGCCTTCCCGGCGAGGTGTGCACGGGCACCGACCCCTTCACCACCGACTTGGTGTTCTCGTTCGGTGAATCGTGCCTGTGCTGGGCCGATCTGTTCATGGGCATCCTGTTCTGCGACCTTGCGACGCTGCGTGCACCTCGGTTCCGTTTCATCCCATTGCCCAAGGCTTGCTCCTTCGACCCCGTCGGCAAGTATGGCCGGCCTCACATGCCCGAGTTCCGTTCCATGGGCCGCGTCAACGGTGTCATCAGGTTGATCGACATGGAGGGTTTTACCAACGAGTACCTGGCCGTGGATGAGGTGAAGCTGACCATCTGGACCCTGTCAGCCGACCTCAGCGAGTGGGAGAAAGGCCCGGTGTGTACTGTAGGAGACATTTGGGCCAGTGAGGAATTCGTCGCCATGGGGTTGCCGCAGCTTAGACCGATGTGCCCTGTCCTGAGCATGGTTGACGAAGATGTCGTCTGTGTAGTCATGACTGAAGTCGAGATTGAGGAGAGCGATGTCACAGATTTCGACGATGAGGGCAACAAGCTCAAGTTCAAGGCCCAGTACGTTCTTGACATCGACGTGCGGCGTAAGCGGGTGTTATCCATCACCCAGCACCACATTGAAAGTATGGGTGATCTTATACCAGATCTCATCGCCTGTGAGTTCACTGCATACTCGGAGCTCTCAAAAGGCATGCAGGCAATGGTGGAAGGAAATGAGGGTGAGGAAAGCACAAAGCGGATGAAGGTTAAATGATCTCTGCATCATGTGGAACTTCGATGGTTTTTGCAACATATCAAGTAGGATTAACATTGAAGATTGGTGTTTGATTAGCACCCATCTATGTGGAAGGATGAATGTGATGTAATCATTCTCTAGAAGTTATGATGTTATTATCAGATGGTAGTAAAACTGAATTGCTAGTGTGTTTTGTTAACGCTGATGGTTTTAACATTACTTCATAGCTACCTTTGAATTGTCTGGTCATGCCGGGCTGGTTGATGGCTGACTCCGATAAGTGATACAAGTGGTACCTGATGATATCTTTTGTCA
CDS Sequence
- >LOC_Os03g14310.1
ATGGCTCCCGCCTGGGTCTTGCTCGATCGCGTCGTCAAGCCCGCCGTCTTCGACGAAGAAGAGAGCAAAGGTAAGGGAGAATCGACCGGCGCCCCAGTGAAGTACCTGCCAGCCAGATTAAGGCAGGAAGTCCCCGCCGGCATGCGGGACGTGAAGCCCTACCCAGAGGTTGCGGATCCTCCCATTATATCTCGCTTCTCCATGCTGATTTCGCGGAAGGCGATCAGGGTAGTGAAATCCGTCCGTGTCCGGTGCGCCGACAAGAGCCTTGTCTTGTTCTACGCCGGCACCGGCTTCCCCGGCTTCTCGTCCCACGGCTGCCACCTGATCTACGACGCCATCGACGGCTCTCTCACTGCGGTGCACACATTCCCCTTTCCTGTGTCCGGAGTCGTCTGGGTCGGCAGAGCCGCTGTCCTGCGCCATGCCGGCGGCGGAGGAGGAGGAGGAGACGGTACTACCGCCTCCTATGTCATCGCCGAGCTGCTCAGGCCGTTTCATGGCTCCCTTCCCGATGCCACGCTCGTGATGTGGTTGTCGAATTCCCCCGCGTCGACCTCCGGCAGCAACGGCCAATGGGTGAAGGAGGACGTTCGCCTTCCCGGCGAGGTGTGCACGGGCACCGACCCCTTCACCACCGACTTGGTGTTCTCGTTCGGTGAATCGTGCCTGTGCTGGGCCGATCTGTTCATGGGCATCCTGTTCTGCGACCTTGCGACGCTGCGTGCACCTCGGTTCCGTTTCATCCCATTGCCCAAGGCTTGCTCCTTCGACCCCGTCGGCAAGTATGGCCGGCCTCACATGCCCGAGTTCCGTTCCATGGGCCGCGTCAACGGTGTCATCAGGTTGATCGACATGGAGGGTTTTACCAACGAGTACCTGGCCGTGGATGAGGTGAAGCTGACCATCTGGACCCTGTCAGCCGACCTCAGCGAGTGGGAGAAAGGCCCGGTGTGTACTGTAGGAGACATTTGGGCCAGTGAGGAATTCGTCGCCATGGGGTTGCCGCAGCTTAGACCGATGTGCCCTGTCCTGAGCATGGTTGACGAAGATGTCGTCTGTGTAGTCATGACTGAAGTCGAGATTGAGGAGAGCGATGTCACAGATTTCGACGATGAGGGCAACAAGCTCAAGTTCAAGGCCCAGTACGTTCTTGACATCGACGTGCGGCGTAAGCGGGTGTTATCCATCACCCAGCACCACATTGAAAGTATGGGTGATCTTATACCAGATCTCATCGCCTGTGAGTTCACTGCATACTCGGAGCTCTCAAAAGGCATGCAGGCAATGGTGGAAGGAAATGAGGGTGAGGAAAGCACAAAGCGGATGAAGGTTAAATGA
Protein Sequence
- >LOC_Os03g14310.1
MAPAWVLLDRVVKPAVFDEEESKGKGESTGAPVKYLPARLRQEVPAGMRDVKPYPEVADPPIISRFSMLISRKAIRVVKSVRVRCADKSLVLFYAGTGFPGFSSHGCHLIYDAIDGSLTAVHTFPFPVSGVVWVGRAAVLRHAGGGGGGGDGTTASYVIAELLRPFHGSLPDATLVMWLSNSPASTSGSNGQWVKEDVRLPGEVCTGTDPFTTDLVFSFGESCLCWADLFMGILFCDLATLRAPRFRFIPLPKACSFDPVGKYGRPHMPEFRSMGRVNGVIRLIDMEGFTNEYLAVDEVKLTIWTLSADLSEWEKGPVCTVGDIWASEEFVAMGLPQLRPMCPVLSMVDEDVVCVVMTEVEIEESDVTDFDDEGNKLKFKAQYVLDIDVRRKRVLSITQHHIESMGDLIPDLIACEFTAYSELSKGMQAMVEGNEGEESTKRMKVK*