Information report for OsLPXC
Gene Details
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Functional Descriptions
- OsLPXC negatively regulates tolerance to cold stress via modulating oxidative stress, antioxidant defense and JA accumulation in rice.
- Knockout of OsLPXC resulted in enhance sensitivity to LT stress in rice, with increased accumulation of reactive oxygen species (ROS), malondialdehyde and electrolyte leakage, while expression and activities of antioxidant enzymes were significantly suppressed.
- The accumulation of methyl jasmonate (MeJA) in leave and several DEGs related to the jasmonate biosynthesis pathway were significantly downregulated in OsLPXC knockout plants, which showed differential levels of MeJA regulation in WT and knockout plants in response to cold stress.
- These results indicated that OsLPXC positively regulates cold tolerance in rice via stabilizing the expression and activities of ROS scavenging enzymes, photosynthetic apparatus, cold signaling genes, and jasmonate biosynthesis.
- The functional analysis of differentially expressed genes (DEGs), showed that numerous genes associated with antioxidant defense, photosynthesis, cold signaling were solely expressed and downregulated in OsLPXC plants compared with WT under LT.
Functional Keywords
- stress , jasmonate , ja , JA , defense , oxidative-stress , tolerance , cold-tolerance , oxidative , cold-stress , cold , reactive-oxygen-species , methyl-jasmonate , antioxidant-defense
Literature and News
Gene Resources
- PANTHER: PTHR33694, PTHR33694:SF1
- SUPFAM: SSF54211
- Gene3D: 3.30.1700.10, 3.30.230.20
- SWISS-MODEL: Q10PR9
Sequences
cDNA Sequence
- >LOC_Os03g12320.3
AGTCCCACCGTCATACTCATCGGGGGCTCGCCCGTCTCCGCAGAGATCGCCCCACACCTGAGAAAGTGAGAAGTTGAATCCCTTCGCCGCCGCCGCCGCCGCCGCCGTCATGTGCGGCTCCGCCGCCCGAGCCCTGAACTCCGTCTCCCGCGCGGCCTTCTCCTGGAAACCAACAGGGTTGCCGCAGCAGACGCTCGCCGCTGCGGTGAGCAGGTCGGGCGTGGGGCTTCACTCGGGGGCGAAAACCACCGCCACGCTGCTCCCCGCGCGAGCCGGCGAGGGGAGGTACTTCGTCGTTGAGGGGGAGGAGACGAGGGTGGCGGCGGAGGTGGCGAATGCCGAGGCGCACTCGCCGCTATGCACCGCGCTGCGGCGGGGCGGCGCGCGGGTGCGCACGGTCGAGCACCTGCTCTCCGCGATGGAGGCGCTCGGCGTCGACAACTGCCGCGTCGAGGTCAGCGGCGGCGACGAGATTCCGTTGCTTGATGGATCAGCGCAAGAGTGGGTGATGGCTATAAGAGGTGCAGGTCAATGTGCGGCCAAGGATTCCAGTGGCCAGAAACTGGAGAAACTGGCTCCGGAAATCCATGAGCCTGTTTACTTGCAGAAGTCTGATTGTTTCATAGCTGCACTCCCTTCCTCAAGAATCCGTATAACCTATGGGATTGATTTTCCAAAAGTGCCAGGAATTGGGTGTCAGCGCTTCGCAACAGTCCTAGATGCTAATGTCTACTCAAGCAAGATAGCCCCAGCAAGAACTTTCTGTATATTTGAAGAGGTTGAAAAATTGCGTTCTGCTGGGCTCATCAGAGGAGGATCGCTAGAAAATGCTACGGTTTGCAGTTCTGAGAAGCACATACCTGTTGACTTATTGCATGATGGATTTTGATATTGGGCAATAATCAGATCATGGCATCATCCCAACCTTATTTCTGGTGGTTGGCTTAATCCACCACTGCGGTTTGAGGATGAACCTTGCCGCCACAAGATTTTAGATCTTATCGGTGATTTCTCGCTTCTTGCACAGAATGGTAACCAGGGTTTTCCACTTGCTCATGTAGTTGCCTACAAGGCTGGTCATGCCCTGCATACTGATTTCCTACGGCATTTGTTGGGAAGGAGCGCTGTGGGCCAAGAAAACCTTGCTGAGCAATGTTGAAAGCATATGGATACCGCTGCTCCGTCGATAATGGCAAGGACGCAAAATTTCAAGGATACAAACATAGGATGGTCGCCCTTCTTCCAGCTAGGCCATGCAGTACCAACTATTCATCTTGCAATTATCTGCCAGCCATTTTTCCATCTATTCCTTTCTCTCTCTTTCTTTTTTGATCTGATGAATCATGTAGCCCATCAGCATCTGTACAACCTGTTTAGTCTTGCAAAGTTGCAATTCAGCATAGAAGTAGATGCCCATGTTATCTGTGTGTACAGTTCTGAGCAGCCAAATACAACTCAAACTGAACCCTTCTCTCC - >LOC_Os03g12320.1
AGTCCCACCGTCATACTCATCGGGGGCTCGCCCGTCTCCGCAGAGATCGCCCCACACCTGAGAAAGTGAGAAGTTGAATCCCTTCGCCGCCGCCGCCGCCGCCGCCGTCATGTGCGGCTCCGCCGCCCGAGCCCTGAACTCCGTCTCCCGCGCGGCCTTCTCCTGGAAACCAACAGGGTTGCCGCAGCAGACGCTCGCCGCTGCGGTGAGCAGGTCGGGCGTGGGGCTTCACTCGGGGGCGAAAACCACCGCCACGCTGCTCCCCGCGCGAGCCGGCGAGGGGAGGTACTTCGTCGTTGAGGGGGAGGAGACGAGGGTGGCGGCGGAGGTGGCGAATGCCGAGGCGCACTCGCCGCTATGCACCGCGCTGCGGCGGGGCGGCGCGCGGGTGCGCACGGTCGAGCACCTGCTCTCCGCGATGGAGGCGCTCGGCGTCGACAACTGCCGCGTCGAGGTCAGCGGCGGCGACGAGATTCCGTTGCTTGATGGATCAGCGCAAGAGTGGGTGATGGCTATAAGAGGTGCAGGTCAATGTGCGGCCAAGGATTCCAGTGGCCAGAAACTGGAGAAACTGGCTCCGGAAATCCATGAGCCTGTTTACTTGCAGAAGTCTGATTGTTTCATAGCTGCACTCCCTTCCTCAAGAATCCGTATAACCTATGGGATTGATTTTCCAAAAGTGCCAGGAATTGGGTGTCAGCGCTTCGCAACAGTCCTAGATGCTAATGTCTACTCAAGCAAGATAGCCCCAGCAAGAACTTTCTGTATATTTGAAGAGGTTGAAAAATTGCGTTCTGCTGGGCTCATCAGAGGAGGATCGCTAGAAAATGCTACGGTTTGCAGTTCTGAGAAGCACATACCTGTTGACTTATTGCATGATGGATTTTGATATTGGGCAATAATCAGATCATGGCATCATCCCAACCTTATTTCTGGTGGTTGGCTTAATCCACCACTGCGGTTTGAGGATGAACCTTGCCGCCACAAGATTTTAGATCTTATCGGTGATTTCTCGCTTCTTGCACAGAATGGTAACCAGGGTTTTCCACTTGCTCATGTAGTTGCCTACAAGGCTGGTCATGCCCTGCATACTGATTTCCTACGGCATTTGTTGGGAAGGAGCGCTGTGGGCCAAGAAAACCTTGCTGAGCAATGTTGAAAGCATATGGATACCGCTGCTCCGTCGATAATGGCAAGGACGCAAAATTTCAAGGATACAAACATAGGATGGTCGCCCTTCTTCCAGCTAGGCCATGCAGTACCAACTATTCATCTTGCAATTATCTGCCAGCCATTTTTCCATCTATTCCTTTCTCTCTCTTTCTTTTTTGATCTGATGAATCATGTAGCCCATCAGCATCTGTACAACCTGTTTAGTCTTGCAAAGTTGCAATTCAGCATAGAAGTAGATGCCCATGTTATCTGTGTGTACAGTTCTGAGCAGCCAAATACAACTCAAACTGAACCCTTCTCTCC - >LOC_Os03g12320.2
AGTCCCACCGTCATACTCATCGGGGGCTCGCCCGTCTCCGCAGAGATCGCCCCACACCTGAGAAAGTGAGAAGTTGAATCCCTTCGCCGCCGCCGCCGCCGCCGCCGTCATGTGCGGCTCCGCCGCCCGAGCCCTGAACTCCGTCTCCCGCGCGGCCTTCTCCTGGAAACCAACAGGGTTGCCGCAGCAGACGCTCGCCGCTGCGGTGAGCAGGTCGGGCGTGGGGCTTCACTCGGGGGCGAAAACCACCGCCACGCTGCTCCCCGCGCGAGCCGGCGAGGGGAGGTACTTCGTCGTTGAGGGGGAGGAGACGAGGGTGGCGGCGGAGGTGGCGAATGCCGAGGCGCACTCGCCGCTATGCACCGCGCTGCGGCGGGGCGGCGCGCGGGTGCGCACGGTCGAGCACCTGCTCTCCGCGATGGAGGCGCTCGGCGTCGACAACTGCCGCGTCGAGGTCAGCGGCGGCGACGAGATTCCGTTGCTTGATGGATCAGCGCAAGAGTGGGTGATGGCTATAAGAGGTGCAGGTCAATGTGCGGCCAAGGATTCCAGTGGCCAGAAACTGGAGAAACTGGCTCCGGAAATCCATGAGCCTGTTTACTTGCAGAAGTCTGATTGTTTCATAGCTGCACTCCCTTCCTCAAGAATCCGTATAACCTATGGGATTGATTTTCCAAAAGTGCCAGGAATTGGGTGTCAGCGCTTCGCAACAGTCCTAGATGCTAATGTCTACTCAAGCAAGATAGCCCCAGCAAGAACTTTCTGTATATTTGAAGAGGTTGAAAAATTGCGTTCTGCTGGGCTCATCAGAGGAGGATCGCTAGAAAATGCTACGGTTTGCAGTTCTGAGAAGCACATACCTGTTGACTTATTGCATGATGGATTTTGATATTGGGCAATAATCAGATCATGGCATCATCCCAACCTTATTTCTGGTGGTTGGCTTAATCCACCACTGCGGTTTGAGGATGAACCTTGCCGCCACAAGATTTTAGATCTTATCGGTGATTTCTCGCTTCTTGCACAGAATGGTAACCAGGGTTTTCCACTTGCTCATGTAGTTGCCTACAAGGCTGGTCATGCCCTGCATACTGATTTCCTACGGCATTTGTTGGGAAGGAGCGCTGTGGGCCAAGAAAACCTTGCTGAGCAATGTTGAAAGCATATGGATACCGCTGCTCCGTCGATAATGGCAAGGACGCAAAATTTCAAGGATACAAACATAGGATGGTCGCCCTTCTTCCAGCTAGGCCATGCAGTACCAACTATTCATCTTGCAATTATCTGCCAGCCATTTTTCCATCTATTCCTTTCTCTCTCTTTCTTTTTTGATCTGATGAATCATGTAGCCCATCAGCATCTGTACAACCTGTTTAGTCTTGCAAAGTTGCAATTCAGCATAGAAGTAGATGCCCATGTTATCTGTGTGTACAGTTCTGAGCAGCCAAATACAACTCAAACTGAACCCTTCTCTCC
CDS Sequence
- >LOC_Os03g12320.3
ATGTGCGGCTCCGCCGCCCGAGCCCTGAACTCCGTCTCCCGCGCGGCCTTCTCCTGGAAACCAACAGGGTTGCCGCAGCAGACGCTCGCCGCTGCGGTGAGCAGGTCGGGCGTGGGGCTTCACTCGGGGGCGAAAACCACCGCCACGCTGCTCCCCGCGCGAGCCGGCGAGGGGAGGTACTTCGTCGTTGAGGGGGAGGAGACGAGGGTGGCGGCGGAGGTGGCGAATGCCGAGGCGCACTCGCCGCTATGCACCGCGCTGCGGCGGGGCGGCGCGCGGGTGCGCACGGTCGAGCACCTGCTCTCCGCGATGGAGGCGCTCGGCGTCGACAACTGCCGCGTCGAGGTCAGCGGCGGCGACGAGATTCCGTTGCTTGATGGATCAGCGCAAGAGTGGGTGATGGCTATAAGAGGTGCAGGTCAATGTGCGGCCAAGGATTCCAGTGGCCAGAAACTGGAGAAACTGGCTCCGGAAATCCATGAGCCTGTTTACTTGCAGAAGTCTGATTGTTTCATAGCTGCACTCCCTTCCTCAAGAATCCGTATAACCTATGGGATTGATTTTCCAAAAGTGCCAGGAATTGGGTGTCAGCGCTTCGCAACAGTCCTAGATGCTAATGTCTACTCAAGCAAGATAGCCCCAGCAAGAACTTTCTGTATATTTGAAGAGGTTGAAAAATTGCGTTCTGCTGGGCTCATCAGAGGAGGATCGCTAGAAAATGCTACGGTTTGCAGTTCTGAGAAGCACATACCTGTTGACTTATTGCATGATGGATTTTGA - >LOC_Os03g12320.1
ATGTGCGGCTCCGCCGCCCGAGCCCTGAACTCCGTCTCCCGCGCGGCCTTCTCCTGGAAACCAACAGGGTTGCCGCAGCAGACGCTCGCCGCTGCGGTGAGCAGGTCGGGCGTGGGGCTTCACTCGGGGGCGAAAACCACCGCCACGCTGCTCCCCGCGCGAGCCGGCGAGGGGAGGTACTTCGTCGTTGAGGGGGAGGAGACGAGGGTGGCGGCGGAGGTGGCGAATGCCGAGGCGCACTCGCCGCTATGCACCGCGCTGCGGCGGGGCGGCGCGCGGGTGCGCACGGTCGAGCACCTGCTCTCCGCGATGGAGGCGCTCGGCGTCGACAACTGCCGCGTCGAGGTCAGCGGCGGCGACGAGATTCCGTTGCTTGATGGATCAGCGCAAGAGTGGGTGATGGCTATAAGAGGTGCAGGTCAATGTGCGGCCAAGGATTCCAGTGGCCAGAAACTGGAGAAACTGGCTCCGGAAATCCATGAGCCTGTTTACTTGCAGAAGTCTGATTGTTTCATAGCTGCACTCCCTTCCTCAAGAATCCGTATAACCTATGGGATTGATTTTCCAAAAGTGCCAGGAATTGGGTGTCAGCGCTTCGCAACAGTCCTAGATGCTAATGTCTACTCAAGCAAGATAGCCCCAGCAAGAACTTTCTGTATATTTGAAGAGGTTGAAAAATTGCGTTCTGCTGGGCTCATCAGAGGAGGATCGCTAGAAAATGCTACGGTTTGCAGTTCTGAGAAGCACATACCTGTTGACTTATTGCATGATGGATTTTGA - >LOC_Os03g12320.2
ATGTGCGGCTCCGCCGCCCGAGCCCTGAACTCCGTCTCCCGCGCGGCCTTCTCCTGGAAACCAACAGGGTTGCCGCAGCAGACGCTCGCCGCTGCGGTGAGCAGGTCGGGCGTGGGGCTTCACTCGGGGGCGAAAACCACCGCCACGCTGCTCCCCGCGCGAGCCGGCGAGGGGAGGTACTTCGTCGTTGAGGGGGAGGAGACGAGGGTGGCGGCGGAGGTGGCGAATGCCGAGGCGCACTCGCCGCTATGCACCGCGCTGCGGCGGGGCGGCGCGCGGGTGCGCACGGTCGAGCACCTGCTCTCCGCGATGGAGGCGCTCGGCGTCGACAACTGCCGCGTCGAGGTCAGCGGCGGCGACGAGATTCCGTTGCTTGATGGATCAGCGCAAGAGTGGGTGATGGCTATAAGAGGTGCAGGTCAATGTGCGGCCAAGGATTCCAGTGGCCAGAAACTGGAGAAACTGGCTCCGGAAATCCATGAGCCTGTTTACTTGCAGAAGTCTGATTGTTTCATAGCTGCACTCCCTTCCTCAAGAATCCGTATAACCTATGGGATTGATTTTCCAAAAGTGCCAGGAATTGGGTGTCAGCGCTTCGCAACAGTCCTAGATGCTAATGTCTACTCAAGCAAGATAGCCCCAGCAAGAACTTTCTGTATATTTGAAGAGGTTGAAAAATTGCGTTCTGCTGGGCTCATCAGAGGAGGATCGCTAGAAAATGCTACGGTTTGCAGTTCTGAGAAGCACATACCTGTTGACTTATTGCATGATGGATTTTGA
Protein Sequence
- >LOC_Os03g12320.3
MCGSAARALNSVSRAAFSWKPTGLPQQTLAAAVSRSGVGLHSGAKTTATLLPARAGEGRYFVVEGEETRVAAEVANAEAHSPLCTALRRGGARVRTVEHLLSAMEALGVDNCRVEVSGGDEIPLLDGSAQEWVMAIRGAGQCAAKDSSGQKLEKLAPEIHEPVYLQKSDCFIAALPSSRIRITYGIDFPKVPGIGCQRFATVLDANVYSSKIAPARTFCIFEEVEKLRSAGLIRGGSLENATVCSSEKHIPVDLLHDGF* - >LOC_Os03g12320.1
MCGSAARALNSVSRAAFSWKPTGLPQQTLAAAVSRSGVGLHSGAKTTATLLPARAGEGRYFVVEGEETRVAAEVANAEAHSPLCTALRRGGARVRTVEHLLSAMEALGVDNCRVEVSGGDEIPLLDGSAQEWVMAIRGAGQCAAKDSSGQKLEKLAPEIHEPVYLQKSDCFIAALPSSRIRITYGIDFPKVPGIGCQRFATVLDANVYSSKIAPARTFCIFEEVEKLRSAGLIRGGSLENATVCSSEKHIPVDLLHDGF* - >LOC_Os03g12320.2
MCGSAARALNSVSRAAFSWKPTGLPQQTLAAAVSRSGVGLHSGAKTTATLLPARAGEGRYFVVEGEETRVAAEVANAEAHSPLCTALRRGGARVRTVEHLLSAMEALGVDNCRVEVSGGDEIPLLDGSAQEWVMAIRGAGQCAAKDSSGQKLEKLAPEIHEPVYLQKSDCFIAALPSSRIRITYGIDFPKVPGIGCQRFATVLDANVYSSKIAPARTFCIFEEVEKLRSAGLIRGGSLENATVCSSEKHIPVDLLHDGF*