Gene Details:

Functional Descriptions:

  • HMS1 catalyzed the biosynthesis of the C26 and C28 VLCFAs, contributing to the formation of bacula and tryphine in the pollen wall, which protect the pollen from dehydration.
  • Under low-humidity, HMS1 pollen showed poor adhesion and reduced germination on the stigmas, which could be rescued by increasing humidity.
  • HMS1 Interacts with HMS1I to Regulate Very-long-chain Fatty Acid Biosynthesis and the Humidity-sensitive Genic Male Sterility in Rice (Oryza sativa).
  • The HMS1 mutant displayed decreased seed setting at low-humidity, but normal seed setting at high-humidity.
  • Furthermore, both japonica and indica rice varieties with defective HMS1 exhibited HGMS, suggesting that HMS1 could potentially be used in hybrid breeding.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os03g12030.1
    TACTCCTCGTCATCTCGTCTCGTCTCCGCCACCGTGCGCGCGTCCCCTATATTAGACCCCCCAACCGGGCACCGGACACACCATCACCAACACACCACTGCAAACCCATCCGCCTCCGCACCGCATCGCACCTACAAATTGTGCACGCTGCACCGCTCAAAAAAAAGAAGAAACTAAAGTCGTACGTAGGACGCGGCGTGCGAGCGTTGGTGCGGTGCGCGGCGGCGCGCGGGGAAGTAGTGAGAGCATCGATCATGCCGGGGGCGGCGGGGTACTCCGGGTCGGTGAAGCTGAAGTACGTGAAGCTGGGGTACCAGTATCTGGTGAACCACTTCCTGACGCTGCTGCTGGTGCCGGTGATGGCGGCGACGGCGCTGGAGCTGGCGCGGATGGGGCCCGGTGAGCTGCTGTCGCTGTGGCGGTCGCTGCAGCTCGACCTCGTCCACATCCTCTGCTCGGTGTTCCTCGTCGTGTTCGTCGGCACGGTGTACTTCATGTCGCGGCCAAGGCCGGTGTACCTCGTCGACTACTCCTGCTACAAGCCGCCGCCCAGCTGCCGGGTGCCGTTCGCCACGTTCATGGAGCACACGCGCCTCATCACCGACGACGAGAAGAGCGTGCGGTTCCAGACCAGGATCCTCGAGCGGTCGGGGCTCGGGGAGGAGACCTGCCTCCCGCCGGCCAACCACTACATCCCGCCTAACCCGTCCATGGAGGCGTCGCGCGCCGAGGCCCAGCTCGTAATCTTCTCCGCCATCGACGACCTCGTCCGCCGCACCGGACTCAAGCCCAAGGACATCGACATCCTCGTCGTCAACTGCAGTCTCTTCTCCCCGACACCGTCGCTCTCCGCCATGATCATCAACAAGTACAAGCTCCGCAGCAACATCCGCAGCTTCAACCTGTCCGGCATGGGCTGCAGCGCCGGCCTCATCTCCCTCGACCTCGCCCGCGACATGCTCCAGGTGCATCCCAACTCGAACGCGCTGGTGGTGTCGACGGAGATCATCACACCAAACTTCTACTGGGGAACCCGGCGGGACATGATGCTGCCCAACTGCCTGTTCCGGATGGGCGCGGCGGCGATCCTGCTGTCGAACAGGAGGAGGGAGGCGAGGAGGGCCAAGTACAGGCTGATGCACGTGGTCCGCACGCACAAGGGCGCCGACGACCGCGCGTACCGGTGCGTGTACGAGGAGGAGGACGAGCAGGGGCACTCGGGGATCTCGCTGTCCAAGGAGCTGATGGCCATCGCCGGCGACGCGCTCAAGTCGAACATCACCACCATCGGCCCGCTGGTGCTGCCCATGTCGGAGCAGCTGCTCTTCTTCTTCCGCCTCGTCGGCCGCAAGCTCATCAACAAGAAGTGGAAGCCGTACATCCCGGACTTCAAGCTGGCGTTCGAGCACTTCTGCATCCACGCCGGGGGACGCGCCGTGATCGACGAGCTGCAGAAGAACCTGGACCTGTCCGCGCAGCACGTGGAGGCGTCCCGCATGACGCTGCACCGGTTCGGCAACACGTCGAGCAGCTCGCTCTGGTACGAGCTCGCCTACATCGAGGCCAAGGGGCGCATGCGCCGCGGCGACCGCGTCTGGCAGATCGGCTTCGGCAGCGGATTCAAGTGCAACAGCGCCGTCTGGAAGTGCCTCCGCACAGTCAAGACGCCCGCCGACGGGCCGTGGGACGACTGCATCCACCGCTACCCCGTCGACATCCCGGAGGTCGTCAAGCTGTGATCGAATCCATGGTAGCCTCAGCCTCGCCCTCGCCGGCGGCCGTCGCGCCGCCGCCGCATTACCTCCCCTACACCTGTACGTCACCCGCGAAGCGTGCGTCCTCAAACTTTGGAGCTTCTTAATTTGTGGTGTTTTCTTCTTTCCTCCTTTCCCCTCCCTCGCTTCTTAATTTTTTTTCTTGTCTTCCTTTTATTTTTATTTTTTTCGCTATAAACACGGATTAAATCGATATACTTTGTCTGATGTGTCACATAAGGAATGATCATTCACAGGAGATTAATTATTATATATTTTTTTAATTTTCCAA
CDS Sequence
  • >LOC_Os03g12030.1
    ATGCCGGGGGCGGCGGGGTACTCCGGGTCGGTGAAGCTGAAGTACGTGAAGCTGGGGTACCAGTATCTGGTGAACCACTTCCTGACGCTGCTGCTGGTGCCGGTGATGGCGGCGACGGCGCTGGAGCTGGCGCGGATGGGGCCCGGTGAGCTGCTGTCGCTGTGGCGGTCGCTGCAGCTCGACCTCGTCCACATCCTCTGCTCGGTGTTCCTCGTCGTGTTCGTCGGCACGGTGTACTTCATGTCGCGGCCAAGGCCGGTGTACCTCGTCGACTACTCCTGCTACAAGCCGCCGCCCAGCTGCCGGGTGCCGTTCGCCACGTTCATGGAGCACACGCGCCTCATCACCGACGACGAGAAGAGCGTGCGGTTCCAGACCAGGATCCTCGAGCGGTCGGGGCTCGGGGAGGAGACCTGCCTCCCGCCGGCCAACCACTACATCCCGCCTAACCCGTCCATGGAGGCGTCGCGCGCCGAGGCCCAGCTCGTAATCTTCTCCGCCATCGACGACCTCGTCCGCCGCACCGGACTCAAGCCCAAGGACATCGACATCCTCGTCGTCAACTGCAGTCTCTTCTCCCCGACACCGTCGCTCTCCGCCATGATCATCAACAAGTACAAGCTCCGCAGCAACATCCGCAGCTTCAACCTGTCCGGCATGGGCTGCAGCGCCGGCCTCATCTCCCTCGACCTCGCCCGCGACATGCTCCAGGTGCATCCCAACTCGAACGCGCTGGTGGTGTCGACGGAGATCATCACACCAAACTTCTACTGGGGAACCCGGCGGGACATGATGCTGCCCAACTGCCTGTTCCGGATGGGCGCGGCGGCGATCCTGCTGTCGAACAGGAGGAGGGAGGCGAGGAGGGCCAAGTACAGGCTGATGCACGTGGTCCGCACGCACAAGGGCGCCGACGACCGCGCGTACCGGTGCGTGTACGAGGAGGAGGACGAGCAGGGGCACTCGGGGATCTCGCTGTCCAAGGAGCTGATGGCCATCGCCGGCGACGCGCTCAAGTCGAACATCACCACCATCGGCCCGCTGGTGCTGCCCATGTCGGAGCAGCTGCTCTTCTTCTTCCGCCTCGTCGGCCGCAAGCTCATCAACAAGAAGTGGAAGCCGTACATCCCGGACTTCAAGCTGGCGTTCGAGCACTTCTGCATCCACGCCGGGGGACGCGCCGTGATCGACGAGCTGCAGAAGAACCTGGACCTGTCCGCGCAGCACGTGGAGGCGTCCCGCATGACGCTGCACCGGTTCGGCAACACGTCGAGCAGCTCGCTCTGGTACGAGCTCGCCTACATCGAGGCCAAGGGGCGCATGCGCCGCGGCGACCGCGTCTGGCAGATCGGCTTCGGCAGCGGATTCAAGTGCAACAGCGCCGTCTGGAAGTGCCTCCGCACAGTCAAGACGCCCGCCGACGGGCCGTGGGACGACTGCATCCACCGCTACCCCGTCGACATCCCGGAGGTCGTCAAGCTGTGA
Protein Sequence
  • >LOC_Os03g12030.1
    MPGAAGYSGSVKLKYVKLGYQYLVNHFLTLLLVPVMAATALELARMGPGELLSLWRSLQLDLVHILCSVFLVVFVGTVYFMSRPRPVYLVDYSCYKPPPSCRVPFATFMEHTRLITDDEKSVRFQTRILERSGLGEETCLPPANHYIPPNPSMEASRAEAQLVIFSAIDDLVRRTGLKPKDIDILVVNCSLFSPTPSLSAMIINKYKLRSNIRSFNLSGMGCSAGLISLDLARDMLQVHPNSNALVVSTEIITPNFYWGTRRDMMLPNCLFRMGAAAILLSNRRREARRAKYRLMHVVRTHKGADDRAYRCVYEEEDEQGHSGISLSKELMAIAGDALKSNITTIGPLVLPMSEQLLFFFRLVGRKLINKKWKPYIPDFKLAFEHFCIHAGGRAVIDELQKNLDLSAQHVEASRMTLHRFGNTSSSSLWYELAYIEAKGRMRRGDRVWQIGFGSGFKCNSAVWKCLRTVKTPADGPWDDCIHRYPVDIPEVVKL*