Information report for OsPDS
Gene Details
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Functional Descriptions
Literature and News
- Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice . DOI: 10.1111/j.1365-313X.2008.03411.x ; PMID: 18208525
- Comparison of CRISPR-Cas9/Cas12a Ribonucleoprotein Complexes for Genome Editing Efficiency in the Rice Phytoene Desaturase (OsPDS) Gene . DOI: 10.1186/s12284-019-0365-z ; PMID: 31965382
Gene Resources
- UniProt: Q0DUI8
- EMBL: AC079633, AP008209, AP014959
- AlphaFoldDB: Q0DUI8
- EnsemblPlants: Os03t0184000-01
- Gramene: Os03t0184000-01
- KEGG: dosa:Os03g0184000, osa:4331854
- Orthologous matrix: HSMIFNQ
- InterPro: IPR002937, IPR014102, IPR036188
- PANTHER: PTHR42923, PTHR42923:SF45
- SUPFAM: SSF51905
- Gene3D: 3.50.50.60
- OrthoDB: Q0DUI8
- SWISS-MODEL: Q0DUI8
- eggNOG: KOG0029
Sequences
cDNA Sequence
- >LOC_Os03g08570.1
CATCTTCCACAATCCTCACCCCCGCCTCCCCTTTGTCCCTTTCCCACCGCCCCAAAAACCCACCCCCTCCCTGACTCCTCCCCCCGCAGCTTCCGCCGTCCGCCTCCGCTCCCACGTCGCCGCCCGCTCGTCGTCGCCGCCGGTGAGTCTCCTCCACTCCGTGCTCGCCCCCTCCGTACCCAGCAGCAGGATCGGATCGGTCGCGCGGGCGGCGGGGACGCTCTTGCGTGCTTATTTGTCAAATCAGATCTGAATATAATTTTAGGAGTTGCTTCAGCATGGATACTGGCTGCCTGTCATCTATGAACATAACTGGAACCAGCCAAGCAAGATCTTTTGCGGGACAACTTCCTACTCATAGGTGCTTCGCAAGTAGCAGCATCCAAGCACTGAAAAGTAGTCAGCATGTGAGCTTTGGAGTGAAATCTCTTGTCTTAAGGAATAAAGGAAAAAGATTCCGTCGGAGGCTCGGTGCTCTACAGGTTGTTTGCCAGGACTTTCCAAGACCTCCACTAGAAAACACAATAAACTTTTTGGAAGCTGGACAACTATCTTCATTTTTCAGAAACAGTGAACAACCCACTAAACCATTACAGGTCGTGATTGCTGGAGCAGGATTAGCTGGTTTATCAACGGCAAAATATCTGGCAGATGCTGGTCATAAACCCATATTGCTTGAGGCAAGGGATGTTTTGGGTGGAAAGATAGCTGCTTGGAAGGATGAAGATGGAGATTGGTATGAAACTGGGCTTCATATCTTTTTTGGAGCTTATCCCAACATACAGAACTTGTTTGGCGAGCTTGGTATTAATGATCGGTTGCAATGGAAGGAACACTCCATGATATTTGCCATGCCAAACAAGCCAGGAGAATTCAGCCGGTTTGATTTTCCTGAAACATTGCCTGCACCCTTAAATGGAATATGGGCCATACTAAGAAACAATGAAATGCTAACTTGGCCAGAGAAGGTGAAGTTTGCTCTTGGACTTTTGCCAGCAATGGTTGGTGGCCAAGCTTATGTTGAAGCTCAAGATGGTTTTACTGTTTCTGAGTGGATGAAAAAGCAGGGTGTTCCTGATCGAGTGAACGATGAGGTTTTCATTGCAATGTCAAAGGCACTTAATTTCATAAATCCTGATGAGTTATCCATGCAGTGCATTCTGATTGCTTTAAACCGATTTCTTCAGGAGAAGCATGGTTCTAAGATGGCATTCTTGGATGGTAATCCTCCTGAAAGGTTATGCATGCCTATTGTTGACCATGTTCGCTCTTTGGGTGGTGAGGTTCGGCTGAATTCTCGTATTCAGAAAATAGAACTTAATCCTGATGGAACAGTGAAACACTTTGCACTTACTGATGGAACTCAAATAACTGGAGATGCTTATGTTTTTGCAACACCAGTTGATATCTTGAAGCTTCTTGTACCTCAAGAGTGGAAAGAAATATCTTATTTCAAGAAGCTGGAGAAGTTGGTGGGAGTTCCTGTTATAAATGTTCATATATGGTTTGATAGAAAACTGAAGAACACATATGACCACCTTCTTTTCAGCAGGAGTTCACTTTTAAGTGTTTATGCGGACATGTCAGTAACTTGCAAGGAATACTATGATCCAAACCGTTCAATGCTGGAGTTGGTCTTTGCTCCTGCAGAGGAATGGGTTGGACGGAGTGACACTGAAATCATCGAAGCAACTATGCAAGAGCTAGCCAAGCTATTTCCTGATGAAATTGCTGCTGATCAGAGTAAAGCAAAGATTCTGAAGTATCATGTTGTGAAGACACCAAGATCTGTTTACAAGACTATCCCGGACTGTGAACCTTGCCGACCTCTGCAAAGATCACCGATTGAAGGGTTCTATCTAGCTGGTGACTACACAAAGCAGAAATATTTGGCTTCGATGGAGGGTGCAGTTCTATCTGGGAAGCTTTGTGCTCAGTCTGTAGTGGAGGATTATAAAATGCTATCTCGTAGGAGCCTGAAAAGTCTGCAGTCTGAAGTTCCTGTTGCCTCCTAGTTGTAGTCAGGACTATTCCCAATGGTGTGTGTGTCATCATCCCCTAGTCAGTTTTTTTCTATTTAGTGGGTGCCCAACTCTCCACCAATTTACACATGATGGAACTTGAAAGATGCCTATTTTGGTCTTATCATATTTCTGTAAAGTTGATTTGTGACTGAGAGCTGATGCCGATATGCCATGCTGGAGAAAAAGAACATTATGTAAAACGACCTGCATAGTAATTCTTAGACTTTTGCAAAAGGCAAAAGGGGTAAAGCGACCTTTTTTTTCTATGTGAAGGGATTAAGAGACCTTA
CDS Sequence
- >LOC_Os03g08570.1
ATGGATACTGGCTGCCTGTCATCTATGAACATAACTGGAACCAGCCAAGCAAGATCTTTTGCGGGACAACTTCCTACTCATAGGTGCTTCGCAAGTAGCAGCATCCAAGCACTGAAAAGTAGTCAGCATGTGAGCTTTGGAGTGAAATCTCTTGTCTTAAGGAATAAAGGAAAAAGATTCCGTCGGAGGCTCGGTGCTCTACAGGTTGTTTGCCAGGACTTTCCAAGACCTCCACTAGAAAACACAATAAACTTTTTGGAAGCTGGACAACTATCTTCATTTTTCAGAAACAGTGAACAACCCACTAAACCATTACAGGTCGTGATTGCTGGAGCAGGATTAGCTGGTTTATCAACGGCAAAATATCTGGCAGATGCTGGTCATAAACCCATATTGCTTGAGGCAAGGGATGTTTTGGGTGGAAAGATAGCTGCTTGGAAGGATGAAGATGGAGATTGGTATGAAACTGGGCTTCATATCTTTTTTGGAGCTTATCCCAACATACAGAACTTGTTTGGCGAGCTTGGTATTAATGATCGGTTGCAATGGAAGGAACACTCCATGATATTTGCCATGCCAAACAAGCCAGGAGAATTCAGCCGGTTTGATTTTCCTGAAACATTGCCTGCACCCTTAAATGGAATATGGGCCATACTAAGAAACAATGAAATGCTAACTTGGCCAGAGAAGGTGAAGTTTGCTCTTGGACTTTTGCCAGCAATGGTTGGTGGCCAAGCTTATGTTGAAGCTCAAGATGGTTTTACTGTTTCTGAGTGGATGAAAAAGCAGGGTGTTCCTGATCGAGTGAACGATGAGGTTTTCATTGCAATGTCAAAGGCACTTAATTTCATAAATCCTGATGAGTTATCCATGCAGTGCATTCTGATTGCTTTAAACCGATTTCTTCAGGAGAAGCATGGTTCTAAGATGGCATTCTTGGATGGTAATCCTCCTGAAAGGTTATGCATGCCTATTGTTGACCATGTTCGCTCTTTGGGTGGTGAGGTTCGGCTGAATTCTCGTATTCAGAAAATAGAACTTAATCCTGATGGAACAGTGAAACACTTTGCACTTACTGATGGAACTCAAATAACTGGAGATGCTTATGTTTTTGCAACACCAGTTGATATCTTGAAGCTTCTTGTACCTCAAGAGTGGAAAGAAATATCTTATTTCAAGAAGCTGGAGAAGTTGGTGGGAGTTCCTGTTATAAATGTTCATATATGGTTTGATAGAAAACTGAAGAACACATATGACCACCTTCTTTTCAGCAGGAGTTCACTTTTAAGTGTTTATGCGGACATGTCAGTAACTTGCAAGGAATACTATGATCCAAACCGTTCAATGCTGGAGTTGGTCTTTGCTCCTGCAGAGGAATGGGTTGGACGGAGTGACACTGAAATCATCGAAGCAACTATGCAAGAGCTAGCCAAGCTATTTCCTGATGAAATTGCTGCTGATCAGAGTAAAGCAAAGATTCTGAAGTATCATGTTGTGAAGACACCAAGATCTGTTTACAAGACTATCCCGGACTGTGAACCTTGCCGACCTCTGCAAAGATCACCGATTGAAGGGTTCTATCTAGCTGGTGACTACACAAAGCAGAAATATTTGGCTTCGATGGAGGGTGCAGTTCTATCTGGGAAGCTTTGTGCTCAGTCTGTAGTGGAGGATTATAAAATGCTATCTCGTAGGAGCCTGAAAAGTCTGCAGTCTGAAGTTCCTGTTGCCTCCTAG
Protein Sequence
- >LOC_Os03g08570.1
MDTGCLSSMNITGTSQARSFAGQLPTHRCFASSSIQALKSSQHVSFGVKSLVLRNKGKRFRRRLGALQVVCQDFPRPPLENTINFLEAGQLSSFFRNSEQPTKPLQVVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPETLPAPLNGIWAILRNNEMLTWPEKVKFALGLLPAMVGGQAYVEAQDGFTVSEWMKKQGVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHVRSLGGEVRLNSRIQKIELNPDGTVKHFALTDGTQITGDAYVFATPVDILKLLVPQEWKEISYFKKLEKLVGVPVINVHIWFDRKLKNTYDHLLFSRSSLLSVYADMSVTCKEYYDPNRSMLELVFAPAEEWVGRSDTEIIEATMQELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQSVVEDYKMLSRRSLKSLQSEVPVAS*