Gene Details:
- MSU gene ID: LOC_Os03g07510
- RAPdb gene ID: Os03g0171300
- Gene Symbol: PGL1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Overexpression of an atypical bHLH, named POSITIVE REGULATOR OF GRAIN LENGTH 1 (PGL1), in lemma/palea increased grain length and weight in transgenic rice.
- Previously, we have shown that an antagonistic pair of basic helix-loop-helix (bHLH) proteins, POSITIVE REGULATOR OF GRAIN LENGTH 1 (PGL1) and ANTAGONIST OF PGL1 (APG), is involved in controlling rice grain length.
- These findings suggest that PGL2 and PGL1 redundantly suppress the function of APG by forming heterodimers to positively regulate the rice grain length, while the pathway through which BU1, the closest homolog of PGL2, controls grain length is independent of APG.
- PGL1-APG represents a new grain length and weight-controlling pathway in which APG is a negative regulator whose function is inhibited by PGL1.
- Transcription of two known grain-length-related genes, GS3 and SRS3, was largely unaffected in the PGL1-overexpressing and APG-silenced plants.
Function-related keywords:
- lemma , palea , grain , grain-length
Literature:
- An atypical bHLH protein encoded by POSITIVE REGULATOR OF GRAIN LENGTH 2 is involved in controlling grain length and weight of rice through interaction with a typical bHLH protein APG . DOI: 10.1270/jsbbs.62.133 ; PMID: 23136524
- Antagonistic actions of HLH/bHLH proteins are involved in grain length and weight in rice . DOI: 10.1371/journal.pone.0031325 ; PMID: 22363621
Related News:
Gene Resources:
- NCBI ID: AK069569
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os03g07510.2
GGTGGATTTTCTGGTCGGCTCCGGCCGCCGCGGGCGCGTTGGCTTCCGCTTCGGTTTCGCGGATGCGGGCTTCCGCTAGGGTTTCTCCCGCTGTCTAACTTGAGCAACAGAACAGGAATGGCTAAGTGGGGGTGTCAAGACTCAAGAAGTTCAGAAAGTAAAATACTTTTCATGCCACATGCGCCACAAGACATGGGCTGTGGATGCCAGATGATTGGAGAAGAGACCAGCCAGCATCGTGACACTGCTGAGTCTGATACACATCATGAGGTGCCATCTTCGAGGGTTCTGCAGGAGACTTGCAACTACATCAGGAGCTTGCATCAGGAGGTCGACGACCTGAGCGAGAGGCTGTCGGAGCTGCTGGCCACGTCCGACATGAGCAGCGCGCAGGCGGCGATCATCCGCAGCCTTCTGATGTAGCCGCCGGCGGCCGTCGTCGCCACATTGTCTTTTGCTGCTGGGCAATCAGCGCGCACACACCCTCGGAATGTTTGTAGCTTAGAGAGTGATCTTAATTAGTACTGGAGGAGCAGGGATTCCTAATTCACTCTACGTTCATAAGTAATGTAATGTTGTTGTCATGTCATCTTCTAAACCAGATCAATCTTTTTTGTGTACTTAATCAAAATCCATCCTGATTCGTGCAAAGTTC - >LOC_Os03g07510.1
GGTGGATTTTCTGGTCGGCTCCGGCCGCCGCGGGCGCGTTGGCTTCCGCTTCGGTTTCGCGGATGCGGGCTTCCGCTAGGGTTTCTCCCGCTGTCTAACTTGAGCAACAGAACAGGAATGGCTAAGTGGGGGTGTCAAGACTCAAGAAGTTCAGAAAGTAAAATACTTTTCATGCCACATGCGCCACAAGACATGGGCTGTGGATGCCAGATGATTGGAGAAGAGACCAGCCAGCATCGTGACACTGCTGAGTCTGATACACATCATGAGGTGCCATCTTCGAGGGTTCTGCAGGAGACTTGCAACTACATCAGGAGCTTGCATCAGGAGGTCGACGACCTGAGCGAGAGGCTGTCGGAGCTGCTGGCCACGTCCGACATGAGCAGCGCGCAGGCGGCGATCATCCGCAGCCTTCTGATGTAGCCGCCGGCGGCCGTCGTCGCCACATTGTCTTTTGCTGCTGGGCAATCAGCGCGCACACACCCTCGGAATGTTTGTAGCTTAGAGAGTGATCTTAATTAGTACTGGAGGAGCAGGGATTCCTAATTCACTCTACGTTCATAAGTAATGTAATGTTGTTGTCATGTCATCTTCTAAACCAGATCAATCTTTTTTGTGTACTTAATCAAAATCCATCCTGATTCGTGCAAAGTTC
CDS Sequence
- >LOC_Os03g07510.2
ATGGCTAAGTGGGGGTGTCAAGACTCAAGAAGTTCAGAAAGTAAAATACTTTTCATGCCACATGCGCCACAAGACATGGGCTGTGGATGCCAGATGATTGGAGAAGAGACCAGCCAGCATCGTGACACTGCTGAGTCTGATACACATCATGAGGTGCCATCTTCGAGGGTTCTGCAGGAGACTTGCAACTACATCAGGAGCTTGCATCAGGAGGTCGACGACCTGAGCGAGAGGCTGTCGGAGCTGCTGGCCACGTCCGACATGAGCAGCGCGCAGGCGGCGATCATCCGCAGCCTTCTGATGTAG - >LOC_Os03g07510.1
ATGGCTAAGTGGGGGTGTCAAGACTCAAGAAGTTCAGAAAGTAAAATACTTTTCATGCCACATGCGCCACAAGACATGGGCTGTGGATGCCAGATGATTGGAGAAGAGACCAGCCAGCATCGTGACACTGCTGAGTCTGATACACATCATGAGGTGCCATCTTCGAGGGTTCTGCAGGAGACTTGCAACTACATCAGGAGCTTGCATCAGGAGGTCGACGACCTGAGCGAGAGGCTGTCGGAGCTGCTGGCCACGTCCGACATGAGCAGCGCGCAGGCGGCGATCATCCGCAGCCTTCTGATGTAG
Protein Sequence
- >LOC_Os03g07510.2
MAKWGCQDSRSSESKILFMPHAPQDMGCGCQMIGEETSQHRDTAESDTHHEVPSSRVLQETCNYIRSLHQEVDDLSERLSELLATSDMSSAQAAIIRSLLM* - >LOC_Os03g07510.1
MAKWGCQDSRSSESKILFMPHAPQDMGCGCQMIGEETSQHRDTAESDTHHEVPSSRVLQETCNYIRSLHQEVDDLSERLSELLATSDMSSAQAAIIRSLLM*