Information report for OsCDC48
Gene Details
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Functional Descriptions
- OsCDC48 was expressed constitutively in the root, stem, leaf and panicle.
- Single base substitution in OsCDC48 is responsible for premature senescence and death phenotype in rice.
- Our results indicated that the impaired function of OsCDC48 was responsible for the premature senescence and death phenotype.
- Overexpression of OsCDC48-psd128 resulted in differential expression of AAA-ATPase associated genes leading to increased total ATPase activity, accumulation of reactive oxygen species and decreased plant tiller numbers while overexpression of OsCDC48 also resulted in differential expression of AAA-ATPase associated genes leading to increased total ATPase activity, but increased plant tiller numbers and grain yield, indicating its potential utilization for yield improvement.
- We demonstrate that the C-terminus of OsCDC48 is essential for maintaining its full ATPase activity and OsCDC48/48E interaction is required to modulate cellular processes and plant survival in rice.
- Our results demonstrated that the C-terminal region of OsCDC48 was essential for maintaining the full ATPase activity and OsCDC48/48E complex might function in form of heteromultimers to modulate cellular processes and plant survival in rice.
- Removal of the C-terminus of OsCDC48 caused altered expression of cell cycle-related genes, changed the percentage of cells in G1 and G2/M phases, and abolished the interaction between OsCDC48 itself and between OsCDC48 and OsCDC48E, respectively.
Functional Keywords
- leaf , panicle , senescence , grain , tiller , ATPase , grain-yield , yield , cell-cycle , tiller-number , reactive-oxygen-species
Literature and News
Gene Resources
- UniProt: A0A8J8Y500
- EMBL: AP008209, CM000140
- EnsemblPlants: Os03t0151800-02
- Gramene: Os03t0151800-02
- KEGG: dosa:Os03g0151800, osa:4331645
- Orthologous matrix: WINPPDF
- InterPro: IPR003338, IPR003593, IPR003959
- PANTHER: PTHR23077, PTHR23077:SF200
- SUPFAM: SSF50692, SSF52540, SSF54585
- PROSITE: PS00674
- Gene3D: 1.10.8.60, 2.40.40.20, 3.10.330.10
- OrthoDB: A0A8J8Y500
- SWISS-MODEL: A0A8J8Y500
- Conserved Domain Database: cd19519, cd19528
Sequences
cDNA Sequence
- >LOC_Os03g05730.1
CACAATCACTTCTCCCCCCGGAATATCTCCGCCAAGAGAAGAGAAGAGACACCCAACAACCCAAAACCTAGCGCCTCTGCGCTCGAGGCCCCCCCGAATCCGCGAATCCGCCGACTCCCATGGCGAGCCAGGGAGAGCCCTCCTCCTCCTCCGATCCGAAGGGGAAGAAGGATTTCTCGACGGCGATCCTCGAGAGGAAGAAGTCGCCGAACCGGCTGGTGGTCGACGAGGCCACCAACGATGATAACTCCGTCATCGGGATGCACCCCGACACCATGGAGAAGCTCCAGCTTTTCCGCGGCGACACTGTGCTGCTCAAGGGTAAGAAGAGAAAAGACACCATCTGCATTGTTCTTGCTGATGACACCTGCGAGGAGCCGAAGATCAGAATGAACAAGGTTGTCAGGAAGAACCTGAGAGTACGACTTGGTGATGTCGTGTCTGTTCATCAATGCCCAGATGTCAAATACGGCAAGCGTGTGCACATACTTCCAATTGATGATACTGTTGAGGGCATCACCGGAAACTTGTTTGATGCCTTCCTGAAACCGTACTTCCTTGAAGCATACCGTCCTTTGAGGAAAGGAGACCTTTTCCTTGTTAGGGGTGGGATGAGAAGTGTTGAATTCAAAGTTATAGAGACTGACCCTGCAGAGTACTGCATTGTTGCACCTGATACGGAGATATTCTGTGATGGTGAGCCTATTAAGAGGGAGGATGAGGAAAGACTTGATGAAGTTGGTTACGATGATGTTGGTGGAGTTAGGAAGCAGATGGCCCAAATCAGAGAACTTGTTGAGCTCCCATTGCGCCATCCCCAACTTTTCAAGTCTATTGGTGTGAAGCCTCCAAAGGGCATACTGCTTTATGGACCCCCTGGCTCTGGAAAGACCCTCATTGCTAGAGCTGTTGCTAATGAAACAGGTGCTTTCTTCTTTCTGATTAATGGCCCGGAGATTATGTCAAAGCTAGCAGGAGAAAGTGAGAGTAATCTCAGGAAGGCATTTGAAGAAGCTGAGAAGAATGCACCATCAATCATTTTCATCGATGAGATAGACTCCATAGCACCAAAGAGAGAGAAGACCCATGGAGAAGTTGAGAGGCGCATCGTTTCACAGCTGTTGACTCTTATGGATGGGCTCAAAGCTCGTTCCCATGTCATTGTCATGGGTGCTACAAACCGGCCAAACAGTATTGATCCTGCTCTCAGAAGGTTTGGTAGGTTCGATCGGGAGATTGACATTGGTGTTCCTGATGAAGTTGGGCGGCTTGAAGTTCTTCGGATTCACACCAAAAACATGAAGCTGGCTGAAGATGTTGACCTGGAACACATTGCCAAAGACACTCATGGGTATGTGGGTGCTGATCTTGCTGCTCTTTGCACTGAGGCTGCTCTCCAATGCATCCGTGAGAAGATGGATATTATAGATCTTGAGGATGAGACCATAGATGCTGAGATACTTAACTCGATGGCTGTTACAAATGATCACTTCAAGACTGCACTAGGGACAAGCAACCCGTCTGCTCTCCGTGAAACTGTTGTTGAAGTTCCAAATGTCTCTTGGGAGGATATTGGTGGACTGGAGAATGTCAAACGGGAGCTGCAGGAGACTGTCCAATATCCAGTGGAGCATCCTGAGAAATTTGAGAAGTTTGGCATGTCTCCGTCCAAAGGTGTTCTGTTCTATGGCCCTCCTGGCTGTGGTAAGACTTTGTTGGCCAAGGCAATTGCTAACGAGTGCCAGGCTAACTTCATTAGTGTCAAGGGACCTGAGCTGCTTACCATGTGGTTTGGTGAGAGTGAGGCCAATGTGCGTGAGATTTTTGACAAGGCTAGGCAGTCAGCTCCTTGTGTCCTCTTCTTTGATGAGCTTGACTCAATTGCTACCCAGAGAGGAAGCAGTGTTGGTGATGCCGGAGGTGCTGCTGATAGAGTGCTGAACCAGTTGTTGACTGAGATGGACGGCATGAACGCGAAGAAAACCGTGTTCATTATTGGTGCTACTAACAGGCCAGATATCATTGACCCTGCCTTGCTAAGGCCAGGGCGTCTTGATCAGCTTATCTACATTCCTCTGCCTGATGATCAATCTAGGCTGCAGATCTTCAAAGCTTGCCTCCGGAAGTCACCTGTGGCCAAGGATGTAGACCTGAATGCTCTTGCCAAATACACCCAAGGTTTCAGTGGTGCTGATATTACAGAAATCTGCCAGCGTGCATGCAAATACGCCATCAGAGAGAACATTGAAAAGGACATCGAGATGGAGAAGCGGAGGAAGGACAACCCTGAAGCCATGGAGGAGGACGAGGTTGATGATATTGCTGAGATCAAGGCGGCTCACTTCGAGGAGTCGATGAAGTACGCACGCCGGAGTGTGAGTGACGCCGACATCCGCAAGTACCAGGCCTTCGCCCAGACTCTGCAGCAGTCTCGTGGGTTCGGCACCGAGTTTAGGTTCGCTGACCAGCCAGCGTCTGGCGCCGGCGCCGCCGCTGACCCCTTCGCATCCGCTGCCGCCGCAGCTGACGATGATGATTTATATAGTTAGATCGCTGTGCTATTTATATTTAACCTCCGTGCTTTTGTTCAGTATGTCTATTTCGCTTTGGTAAACTTTATCATATGTAACATACGGGGAAACAGTGTACTATTTTTAAGTTAATATTTTGAGAGGTACTGAACCGAATTGCATGTTTCTGTATGGATGTGTCGTGGATGAGCATGGTTGCGGGTTGTATTCATCGATTGGAGCATGGATAGATTTGCGTTGTATGTTTGTGAGGTTTATAGATGCTCCTGCAAGGCTGGAACTTGTTGAAGTTTGTTTTTATAGTGTTAATCCGAGGCTTCATTTGGTCGGCGAGACACCAACCGACAAAAAAAAACAAAGGTCAGAGGGCAGACATAAGTTGAC
CDS Sequence
- >LOC_Os03g05730.1
ATGGCGAGCCAGGGAGAGCCCTCCTCCTCCTCCGATCCGAAGGGGAAGAAGGATTTCTCGACGGCGATCCTCGAGAGGAAGAAGTCGCCGAACCGGCTGGTGGTCGACGAGGCCACCAACGATGATAACTCCGTCATCGGGATGCACCCCGACACCATGGAGAAGCTCCAGCTTTTCCGCGGCGACACTGTGCTGCTCAAGGGTAAGAAGAGAAAAGACACCATCTGCATTGTTCTTGCTGATGACACCTGCGAGGAGCCGAAGATCAGAATGAACAAGGTTGTCAGGAAGAACCTGAGAGTACGACTTGGTGATGTCGTGTCTGTTCATCAATGCCCAGATGTCAAATACGGCAAGCGTGTGCACATACTTCCAATTGATGATACTGTTGAGGGCATCACCGGAAACTTGTTTGATGCCTTCCTGAAACCGTACTTCCTTGAAGCATACCGTCCTTTGAGGAAAGGAGACCTTTTCCTTGTTAGGGGTGGGATGAGAAGTGTTGAATTCAAAGTTATAGAGACTGACCCTGCAGAGTACTGCATTGTTGCACCTGATACGGAGATATTCTGTGATGGTGAGCCTATTAAGAGGGAGGATGAGGAAAGACTTGATGAAGTTGGTTACGATGATGTTGGTGGAGTTAGGAAGCAGATGGCCCAAATCAGAGAACTTGTTGAGCTCCCATTGCGCCATCCCCAACTTTTCAAGTCTATTGGTGTGAAGCCTCCAAAGGGCATACTGCTTTATGGACCCCCTGGCTCTGGAAAGACCCTCATTGCTAGAGCTGTTGCTAATGAAACAGGTGCTTTCTTCTTTCTGATTAATGGCCCGGAGATTATGTCAAAGCTAGCAGGAGAAAGTGAGAGTAATCTCAGGAAGGCATTTGAAGAAGCTGAGAAGAATGCACCATCAATCATTTTCATCGATGAGATAGACTCCATAGCACCAAAGAGAGAGAAGACCCATGGAGAAGTTGAGAGGCGCATCGTTTCACAGCTGTTGACTCTTATGGATGGGCTCAAAGCTCGTTCCCATGTCATTGTCATGGGTGCTACAAACCGGCCAAACAGTATTGATCCTGCTCTCAGAAGGTTTGGTAGGTTCGATCGGGAGATTGACATTGGTGTTCCTGATGAAGTTGGGCGGCTTGAAGTTCTTCGGATTCACACCAAAAACATGAAGCTGGCTGAAGATGTTGACCTGGAACACATTGCCAAAGACACTCATGGGTATGTGGGTGCTGATCTTGCTGCTCTTTGCACTGAGGCTGCTCTCCAATGCATCCGTGAGAAGATGGATATTATAGATCTTGAGGATGAGACCATAGATGCTGAGATACTTAACTCGATGGCTGTTACAAATGATCACTTCAAGACTGCACTAGGGACAAGCAACCCGTCTGCTCTCCGTGAAACTGTTGTTGAAGTTCCAAATGTCTCTTGGGAGGATATTGGTGGACTGGAGAATGTCAAACGGGAGCTGCAGGAGACTGTCCAATATCCAGTGGAGCATCCTGAGAAATTTGAGAAGTTTGGCATGTCTCCGTCCAAAGGTGTTCTGTTCTATGGCCCTCCTGGCTGTGGTAAGACTTTGTTGGCCAAGGCAATTGCTAACGAGTGCCAGGCTAACTTCATTAGTGTCAAGGGACCTGAGCTGCTTACCATGTGGTTTGGTGAGAGTGAGGCCAATGTGCGTGAGATTTTTGACAAGGCTAGGCAGTCAGCTCCTTGTGTCCTCTTCTTTGATGAGCTTGACTCAATTGCTACCCAGAGAGGAAGCAGTGTTGGTGATGCCGGAGGTGCTGCTGATAGAGTGCTGAACCAGTTGTTGACTGAGATGGACGGCATGAACGCGAAGAAAACCGTGTTCATTATTGGTGCTACTAACAGGCCAGATATCATTGACCCTGCCTTGCTAAGGCCAGGGCGTCTTGATCAGCTTATCTACATTCCTCTGCCTGATGATCAATCTAGGCTGCAGATCTTCAAAGCTTGCCTCCGGAAGTCACCTGTGGCCAAGGATGTAGACCTGAATGCTCTTGCCAAATACACCCAAGGTTTCAGTGGTGCTGATATTACAGAAATCTGCCAGCGTGCATGCAAATACGCCATCAGAGAGAACATTGAAAAGGACATCGAGATGGAGAAGCGGAGGAAGGACAACCCTGAAGCCATGGAGGAGGACGAGGTTGATGATATTGCTGAGATCAAGGCGGCTCACTTCGAGGAGTCGATGAAGTACGCACGCCGGAGTGTGAGTGACGCCGACATCCGCAAGTACCAGGCCTTCGCCCAGACTCTGCAGCAGTCTCGTGGGTTCGGCACCGAGTTTAGGTTCGCTGACCAGCCAGCGTCTGGCGCCGGCGCCGCCGCTGACCCCTTCGCATCCGCTGCCGCCGCAGCTGACGATGATGATTTATATAGTTAG
Protein Sequence
- >LOC_Os03g05730.1
MASQGEPSSSSDPKGKKDFSTAILERKKSPNRLVVDEATNDDNSVIGMHPDTMEKLQLFRGDTVLLKGKKRKDTICIVLADDTCEEPKIRMNKVVRKNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTVEGITGNLFDAFLKPYFLEAYRPLRKGDLFLVRGGMRSVEFKVIETDPAEYCIVAPDTEIFCDGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKARSHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLEHIAKDTHGYVGADLAALCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDDQSRLQIFKACLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIEMEKRRKDNPEAMEEDEVDDIAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFADQPASGAGAAADPFASAAAAADDDDLYS*