Information report for GADPH;OsGAPB
Gene Details
|
|
Functional Descriptions
- Transient expression of the GFP-tagged light-related transcription factor OsGLK1 markedly upregulated transcript levels of the endogeneous photosynthetic genes OsLhcb1, OsLhcp, GADPH and RbcS, which were reduced to some extent by NF treatment in the rice green tissue protoplasts.
- CONCLUSION: Our results revealed that low light stress on vegetative stage of rice inhibits photosynthesis possibly by decreasing the photosynthetic proteins and OsGAPB gene is a good candidate for manipulating rice tolerance to low light stress.
- Proteomic Analysis of Rice Subjected to Low Light Stress and Overexpression of OsGAPB Increases the Stress Tolerance.
Functional Keywords
Literature and News
- A highly efficient rice green tissue protoplast system for transient gene expression and studying light/chloroplast-related processes . DOI: 10.1186/1746-4811-7-30 ; PMID: 21961694
- Proteomic Analysis of Rice Subjected to Low Light Stress and Overexpression of OsGAPB Increases the Stress Tolerance . DOI: 10.1186/s12284-020-00390-8 ; PMID: 32488648
Gene Resources
- UniProt: Q9SNK3
- EMBL: AC099739, AP014959, DP000009
- AlphaFoldDB: Q9SNK3
- EnsemblPlants: Os03t0129300-01
- Gramene: Os03t0129300-01
- KEGG: osa:4331495
- Orthologous matrix: QVKLYVW
- InterPro: IPR006424, IPR020828, IPR020829
Sequences
cDNA Sequence
- >LOC_Os03g03720.1
GCCTTCCGCGCAACGGGTGGCTGCGCGCGCGTGCAATCGCCTTATCCCCGGTCTCCACGCCACAAAGCCCCAGCGGTGATCGCCGCGCCCTCCGCGCCAAGTACATATACGCGCGCATCCGGCCGCCTCGATCCATCCAGCCGAGCGAGCTAAGGAAGGAAGAAGCATACAGGCGGCAGCGACGAGCCATGGCCACACACGCAGCGCTCGCGGCGTCCCGCATTCCGGCCACCGCCCGGCTGCACAGCAAGGCGGCGTCCAAGCAGAGGGTGGACTTCGCCGACTTCTCCGGACTGAGGCCGGGATCGTGCTCCATCAGCCACGCCGCGAGGGAGGCGTCCTTCTCCGATGTCCTTGGCTCGCAGCTCGTCGCCAGGGCTACCGGAGAGAACGCCGTGAGGGCGCCGGCTGAGGCGAAGCTCAAGGTTGCCATCAACGGCTTCGGCCGCATTGGCCGCAACTTCCTCCGGTGCTGGCACGAACGCGAGAACTCCCCGCTCGAGGTCGTCGTCGTCAACGACAGCGGAGGCGTCAGGAACGCATCACACCTTCTCAAGTACGACTCGATGCTCGGCACCTTCAAGGCCGACGTCAAGATCGTCGACGACCAGACCATCAGCGTCGACGGCAAGCTGATCAAGGTCGTCTCCAACAGGGACCCCCTCAAGCTGCCATGGGCTGAGCTCGGCATCGACATTGTCATCGAGGGTACCGGAGTGTTCGTCGACGGCCCCGGCGCCGGGAAGCACATCCAGGCCGGCGCGAAGAAGGTCATCATCACTGCTCCGGCGAAGGGTGCTGACATCCCTACCTACGTCCTCGGTGTCAACGAGGGAGACTACTCCCACGAAGTGGCCAACATTATCAGCAATGCTTCCTGCACAACCAACTGCCTCGCTCCGTTCGTCAAGATCTTGGACGAAGAGTTCGGAATCGTAAAGGGAACCATGACCACAACTCACTCCTACACCGGCGACCAGAGGTTGCTGGACGCGTCGCACCGTGACCTGAGGAGGGCCCGGGCGGCGGCGCTGAACATCGTGCCGACGAGCACCGGCGCCGCGAAGGCCGTGGCGCTGGTGCTCCCGCAGCTGAAGGGGAAGCTCAACGGCATCGCGCTGCGCGTGCCGACCCCGAACGTGTCCGTGGTGGACCTGGTGATCAACACCGTGAAGACCGGCATCACCGCCGACGACGTGAACGCCGCGTTCCGCAAGGCCGCGGCGGGGCCACTCAGCGGCATCCTCGACGTCTGCGACGTGCCGCTGGTGTCCGTCGACTTCCGCTGCTCCGACGTCTCCTCCACCATCGACGCCTCGCTCACCATGGTCATGGGCGACGACATGGTCAAGGTGGTCGCCTGGTACGACAACGAGTGGGGCTACAGCCAACGCGTGGTCGATCTGGCGCATCTGGTGGCGAGCAAGTGGCCCGGCGCGGCGGTGCAGGGCAGCGGCGACCCACTGGAGGACTTCTGCAAGGACAACCCGGAGACCGACGAGTGCAAAGTGTACGAAAACTAAGACCACTGTCCAAGTACGGGCTCGCGTAGGTGCAGAAATATATACTCCTATAATGTAACGAAGCACACACATTGACTGTCCCCGGGCAGAACTGCTATACTATATATACTGTGCTCGGATTGGCTGCCCGTACGTTGTTCCCCTTCGACAGAGGAACGCATGACTGTCGAAGAAGAAACACAGCTGCAGACACGGGCCATTTTCTGTGAGGTGTAATACTGAACTTTGGTACAGACTTCAGGATTTTTTTCTTTTCGAGTCTTGTTTTACTTTCTTCTGTCTGTGTGTTTGTGCCACATGCGTCTGTTTTGTCCGAATTCTGAAGTCTGAAGTCATGAGGTTTCGAATTTCGGCAGCCCATA - >LOC_Os03g03720.2
GCCTTCCGCGCAACGGGTGGCTGCGCGCGCGTGCAATCGCCTTATCCCCGGTCTCCACGCCACAAAGCCCCAGCGGTGATCGCCGCGCCCTCCGCGCCAAGTACATATACGCGCGCATCCGGCCGCCTCGATCCATCCAGCCGAGCGAGCTAAGGAAGGAAGAAGCATACAGGCGGCAGCGACGAGCCATGGCCACACACGCAGCGCTCGCGGCGTCCCGCATTCCGGCCACCGCCCGGCTGCACAGCAAGGCGGCGTCCAAGCAGAGGGTGGACTTCGCCGACTTCTCCGGACTGAGGCCGGGATCGTGCTCCATCAGCCACGCCGCGAGGGAGGCGTCCTTCTCCGATGTCCTTGGCTCGCAGCTCGTCGCCAGGGCTACCGGAGAGAACGCCGTGAGGGCGCCGGCTGAGGCGAAGCTCAAGGTTGCCATCAACGGCTTCGGCCGCATTGGCCGCAACTTCCTCCGGTGCTGGCACGAACGCGAGAACTCCCCGCTCGAGGTCGTCGTCGTCAACGACAGCGGAGGCGTCAGGAACGCATCACACCTTCTCAAGTACGACTCGATGCTCGGCACCTTCAAGGCCGACGTCAAGATCGTCGACGACCAGACCATCAGCGTCGACGGCAAGCTGATCAAGGTCGTCTCCAACAGGGACCCCCTCAAGCTGCCATGGGCTGAGCTCGGCATCGACATTGTCATCGAGGGTACCGGAGTGTTCGTCGACGGCCCCGGCGCCGGGAAGCACATCCAGGCCGGCGCGAAGAAGGTCATCATCACTGCTCCGGCGAAGGGTGCTGACATCCCTACCTACGTCCTCGGTGTCAACGAGGGAGACTACTCCCACGAAGTGGCCAACATTATCAGCAATGCTTCCTGCACAACCAACTGCCTCGCTCCGTTCGTCAAGATCTTGGACGAAGAGTTCGGAATCGTAAAGGGAACCATGACCACAACTCACTCCTACACCGGCGACCAGAGGTTGCTGGACGCGTCGCACCGTGACCTGAGGAGGGCCCGGGCGGCGGCGCTGAACATCGTGCCGACGAGCACCGGCGCCGCGAAGGCCGTGGCGCTGGTGCTCCCGCAGCTGAAGGGGAAGCTCAACGGCATCGCGCTGCGCGTGCCGACCCCGAACGTGTCCGTGGTGGACCTGGTGATCAACACCGTGAAGACCGGCATCACCGCCGACGACGTGAACGCCGCGTTCCGCAAGGCCGCGGCGGGGCCACTCAGCGGCATCCTCGACGTCTGCGACGTGCCGCTGGTGTCCGTCGACTTCCGCTGCTCCGACGTCTCCTCCACCATCGACGCCTCGCTCACCATGGTCATGGGCGACGACATGGTCAAGGTGGTCGCCTGGTACGACAACGAGTGGGGCTACAGCCAACGCGTGGTCGATCTGGCGCATCTGGTGGCGAGCAAGTGGCCCGGCGCGGCGGTGCAGGGCAGCGGCGACCCACTGGAGGACTTCTGCAAGGACAACCCGGAGACCGACGAGTGCAAAGTGTACGAAAACTAAGACCACTGTCCAAGTACGGGCTCGCGTAGGTGCAGAAATATATACTCCTATAATGTAACGAAGCACACACATTGACTGTCCCCGGGCAGAACTGCTATACTATATATACTGTGCTCGGATTGGCTGCCCGTACGTTGTTCCCCTTCGACAGAGGAACGCATGACTGTCGAAGAAGAAACACAGCTGCAGACACGGGCCATTTTCTGTGAGGTGTAATACTGAACTTTGGTACAGACTTCAGGATTTTTTTCTTTTCGAGTCTTGTTTTACTTTCTTCTGTCTGTGTGTTTGTGCCACATGCGTCTGTTTTGTCCGAATTCTGAAGTCTGAAGTCATGAGGTTTCGAATTTCGGCAGCCCATA
CDS Sequence
- >LOC_Os03g03720.1
ATGGCCACACACGCAGCGCTCGCGGCGTCCCGCATTCCGGCCACCGCCCGGCTGCACAGCAAGGCGGCGTCCAAGCAGAGGGTGGACTTCGCCGACTTCTCCGGACTGAGGCCGGGATCGTGCTCCATCAGCCACGCCGCGAGGGAGGCGTCCTTCTCCGATGTCCTTGGCTCGCAGCTCGTCGCCAGGGCTACCGGAGAGAACGCCGTGAGGGCGCCGGCTGAGGCGAAGCTCAAGGTTGCCATCAACGGCTTCGGCCGCATTGGCCGCAACTTCCTCCGGTGCTGGCACGAACGCGAGAACTCCCCGCTCGAGGTCGTCGTCGTCAACGACAGCGGAGGCGTCAGGAACGCATCACACCTTCTCAAGTACGACTCGATGCTCGGCACCTTCAAGGCCGACGTCAAGATCGTCGACGACCAGACCATCAGCGTCGACGGCAAGCTGATCAAGGTCGTCTCCAACAGGGACCCCCTCAAGCTGCCATGGGCTGAGCTCGGCATCGACATTGTCATCGAGGGTACCGGAGTGTTCGTCGACGGCCCCGGCGCCGGGAAGCACATCCAGGCCGGCGCGAAGAAGGTCATCATCACTGCTCCGGCGAAGGGTGCTGACATCCCTACCTACGTCCTCGGTGTCAACGAGGGAGACTACTCCCACGAAGTGGCCAACATTATCAGCAATGCTTCCTGCACAACCAACTGCCTCGCTCCGTTCGTCAAGATCTTGGACGAAGAGTTCGGAATCGTAAAGGGAACCATGACCACAACTCACTCCTACACCGGCGACCAGAGGTTGCTGGACGCGTCGCACCGTGACCTGAGGAGGGCCCGGGCGGCGGCGCTGAACATCGTGCCGACGAGCACCGGCGCCGCGAAGGCCGTGGCGCTGGTGCTCCCGCAGCTGAAGGGGAAGCTCAACGGCATCGCGCTGCGCGTGCCGACCCCGAACGTGTCCGTGGTGGACCTGGTGATCAACACCGTGAAGACCGGCATCACCGCCGACGACGTGAACGCCGCGTTCCGCAAGGCCGCGGCGGGGCCACTCAGCGGCATCCTCGACGTCTGCGACGTGCCGCTGGTGTCCGTCGACTTCCGCTGCTCCGACGTCTCCTCCACCATCGACGCCTCGCTCACCATGGTCATGGGCGACGACATGGTCAAGGTGGTCGCCTGGTACGACAACGAGTGGGGCTACAGCCAACGCGTGGTCGATCTGGCGCATCTGGTGGCGAGCAAGTGGCCCGGCGCGGCGGTGCAGGGCAGCGGCGACCCACTGGAGGACTTCTGCAAGGACAACCCGGAGACCGACGAGTGCAAAGTGTACGAAAACTAA - >LOC_Os03g03720.2
ATGGCCACACACGCAGCGCTCGCGGCGTCCCGCATTCCGGCCACCGCCCGGCTGCACAGCAAGGCGGCGTCCAAGCAGAGGGTGGACTTCGCCGACTTCTCCGGACTGAGGCCGGGATCGTGCTCCATCAGCCACGCCGCGAGGGAGGCGTCCTTCTCCGATGTCCTTGGCTCGCAGCTCGTCGCCAGGGCTACCGGAGAGAACGCCGTGAGGGCGCCGGCTGAGGCGAAGCTCAAGGTTGCCATCAACGGCTTCGGCCGCATTGGCCGCAACTTCCTCCGGTGCTGGCACGAACGCGAGAACTCCCCGCTCGAGGTCGTCGTCGTCAACGACAGCGGAGGCGTCAGGAACGCATCACACCTTCTCAAGTACGACTCGATGCTCGGCACCTTCAAGGCCGACGTCAAGATCGTCGACGACCAGACCATCAGCGTCGACGGCAAGCTGATCAAGGTCGTCTCCAACAGGGACCCCCTCAAGCTGCCATGGGCTGAGCTCGGCATCGACATTGTCATCGAGGGTACCGGAGTGTTCGTCGACGGCCCCGGCGCCGGGAAGCACATCCAGGCCGGCGCGAAGAAGGTCATCATCACTGCTCCGGCGAAGGGTGCTGACATCCCTACCTACGTCCTCGGTGTCAACGAGGGAGACTACTCCCACGAAGTGGCCAACATTATCAGCAATGCTTCCTGCACAACCAACTGCCTCGCTCCGTTCGTCAAGATCTTGGACGAAGAGTTCGGAATCGTAAAGGGAACCATGACCACAACTCACTCCTACACCGGCGACCAGAGGTTGCTGGACGCGTCGCACCGTGACCTGAGGAGGGCCCGGGCGGCGGCGCTGAACATCGTGCCGACGAGCACCGGCGCCGCGAAGGCCGTGGCGCTGGTGCTCCCGCAGCTGAAGGGGAAGCTCAACGGCATCGCGCTGCGCGTGCCGACCCCGAACGTGTCCGTGGTGGACCTGGTGATCAACACCGTGAAGACCGGCATCACCGCCGACGACGTGAACGCCGCGTTCCGCAAGGCCGCGGCGGGGCCACTCAGCGGCATCCTCGACGTCTGCGACGTGCCGCTGGTGTCCGTCGACTTCCGCTGCTCCGACGTCTCCTCCACCATCGACGCCTCGCTCACCATGGTCATGGGCGACGACATGGTCAAGGTGGTCGCCTGGTACGACAACGAGTGGGGCTACAGCCAACGCGTGGTCGATCTGGCGCATCTGGTGGCGAGCAAGTGGCCCGGCGCGGCGGTGCAGGGCAGCGGCGACCCACTGGAGGACTTCTGCAAGGACAACCCGGAGACCGACGAGTGCAAAGTGTACGAAAACTAA
Protein Sequence
- >LOC_Os03g03720.1
MATHAALAASRIPATARLHSKAASKQRVDFADFSGLRPGSCSISHAAREASFSDVLGSQLVARATGENAVRAPAEAKLKVAINGFGRIGRNFLRCWHERENSPLEVVVVNDSGGVRNASHLLKYDSMLGTFKADVKIVDDQTISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVLGVNEGDYSHEVANIISNASCTTNCLAPFVKILDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPQLKGKLNGIALRVPTPNVSVVDLVINTVKTGITADDVNAAFRKAAAGPLSGILDVCDVPLVSVDFRCSDVSSTIDASLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVASKWPGAAVQGSGDPLEDFCKDNPETDECKVYEN* - >LOC_Os03g03720.2
MATHAALAASRIPATARLHSKAASKQRVDFADFSGLRPGSCSISHAAREASFSDVLGSQLVARATGENAVRAPAEAKLKVAINGFGRIGRNFLRCWHERENSPLEVVVVNDSGGVRNASHLLKYDSMLGTFKADVKIVDDQTISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVLGVNEGDYSHEVANIISNASCTTNCLAPFVKILDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPQLKGKLNGIALRVPTPNVSVVDLVINTVKTGITADDVNAAFRKAAAGPLSGILDVCDVPLVSVDFRCSDVSSTIDASLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVASKWPGAAVQGSGDPLEDFCKDNPETDECKVYEN*