Gene Details:
- MSU gene ID: LOC_Os03g02010
- RAPdb gene ID: Os03g0110800
- Gene Symbol: OsDRM2
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Whereas Arabidopsis drm1 drm2 double mutants showed no morphological alterations, targeted disruptants of rice OsDRM2 displayed pleiotropic developmental phenotypes in both vegetative and reproductive stages, including growth defects, semi-dwarfed stature, reductions in tiller number, delayed heading or no heading, abnormal panicle and spikelet morphology, and complete sterility.
- Our results suggest that OsDRM2 is responsible for de novo, CG and non-CG methylation in rice genomic sequences, and that DNA methylation regulated by OsDRM2 is essential for proper rice development in both vegetative and reproductive stages.
- Impaired growth and abnormal DNA methylation of OsDRM2 disruptants were restored by the complementation of wild-type OsDRM2 cDNA.
- Targeted disruption of an orthologue of DOMAINS REARRANGED METHYLASE 2, OsDRM2, impairs the growth of rice plants by abnormal DNA methylation.
Function-related keywords:
- dwarf , spikelet , tiller , reproductive , sterility , growth , vegetative , panicle , tiller-number
Literature:
- Functional characterization of a rice de novo DNA methyltransferase, OsDRM2, expressed in Escherichia coli and yeast . DOI: 10.1016/j.bbrc.2013.01.067 ; PMID: 23357425
- De novo methyltransferase, OsDRM2, interacts with the ATP-dependent RNA helicase, OseIF4A, in rice . DOI: 10.1016/j.jmb.2013.05.021 ; PMID: 23732981
- Targeted disruption of an orthologue of DOMAINS REARRANGED METHYLASE 2, OsDRM2, impairs the growth of rice plants by abnormal DNA methylation . DOI: 10.1111/j.1365-313X.2012.04974.x ; PMID: 22380881
- The ortholog of DDM1 is mainly required for CHG and CG methylation of heterochromatin and is involved in DRM2-mediated CHH methylation that targets mostly genic regions of the rice genome . DOI: 10.1104/pp.16.00393 ; PMID: 27208249
Related News:
Gene Resources:
- NCBI ID: AK065147
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os03g02010.4
ACACTAGTCGTCGTCGAGAGGCGCGGAGGCAACGCCGTGTGGTCGCCATCGCCATCGCCTTCCTCCTCCTCCTCCTCCGCCGCCGCGCGCTTCCTCGCCACCGCGCGCCCAGGGCCATCGGCGGCGGACGCCCTCGCCCACGCGCGCGAGAGAGGGGGGCGAGAGATTATCGGACGAGTCGCTTTGCGGAGCTTTCTAGAATGGTGGACTGGGCTTCAGATAGCGACAATGATAAGTTCGAGTGGGACACAGACGGTGAGGCTGAGACCTCATCTGCCCCGGCCCTAAGGAACATAGATGCTCCTGGTCCGTCCACGAGGCTGCCGCAGGATGCAAATGGGAAGGCCAACGGGTCAGGTGCTTTGGTTGCTGAATTTATGGGAATGGGATTCCCAAAAGAAATGATCTTGAAAGCGATTAAGGAGATTGGTAACGATAACAATAATCTAGTTCTCTTATTTGCTTCTGGTTGCATTTTGAATCTTCTGTTTCAACTGCTGTCTTTTCTTTCAGGGGATACAGATACAGAGCAATTGCTTGAGTTACTTCTGACTTATCAGGTATTTGCCCACATGGTTGCATCACTCTGTTTATTATTATCTAATGCTCTACTGTACAAGTGATGCCGTGTAATGCAGGCAATAGGCGGTGACGCTTCAGTGGGTAACTGCTCTGCTTCGGCCTGTGCCCCCCAGACTCTTGAAGTCGACGAGGAGGAGGATGATACTAATTGGGATGAATATGATACTGCTGGCAATTGTGACAGGACTCCTCACTCTGATGGTTCTGGTGACGAGGATTTCTTTCAAGAAATGTCAGAGAAGGATGAAAAAATGAAGTCCTTAGTCAACATGGGTTTTCCTGAAGATGAAGCAAAGATGGCTATCGATAGATGTCTCGATGCGCCTGTAGCAGTGTTGGTTGATTCAATCTATGCATCACAGGAAGCAGGAAATGGTTACTCTGCAAACTTATCTGACTATGAGGATACAGAGTTCAGTTCCTTTGGAGGAAGAAAGAAAACAAGATTTGTGGATGGAAGCAAGAAGAGAAAGCGGTATGGAAGTGGGCCATCTGGGAATCAAGTGCCGTTTGATGGCAGCCACGAAGAGCCCATGCCTCTTCCAAATCCAATGGTGGGATTCAGCTTGCCCAATGAGAGGTTAAGGTCAGTCCACAGAAATCTTCCTGACCAAGCTCTTGGGCCACCATTCTTTTACTATGAAAACGTGGCCCTAGCTCCAAAAGGTGTATGGACAACCATCTCAAGGTTTTTATATGACATTCAGCCTGAGTTTGTGGACTCCAAGTACTTTTGTGCTGCTGCCAGGAAGAGGGGTTATATTCATAACCTGCCGATTGAGAACAGGTCACCTGTTCTCCCAATGCCTCCCAAAACAATATCTGAAGCCTTTCCTAATACCAAGAGGTGGTGGCCTTCCTGGGATCCAAGGAGGCAGTTCAACTGCTTGCAAACTTGTATGGCAAGCGCAAAGCTTACAGAGCGAATTCGTTGTGCTTTGGGTAGATTCAGTGATGTACCAACTCCACAAGTTCAGAAGTATGTCTTGGACGAATGTAGGAAATGGAACCTAGTTTGGGTCGGAAAGAATAAGGTCGCTCCTCTAGAGCCTGATGAGATGGAGTTCCTGTTAGGGTACCCTAGAAACCACACTAGGGGAGTTAGCAGGACGGAGAGGTACAGGGCTCTCGGGAATTCATTCCAAGTTGATACAGTAGCATACCATCTCTCTGTGCTGAGGGACCTGTTTCCCAATGGAATGAATGTCTTATCCCTGTTTTCTGGTATTGGAGGAGCAGAGGTAGCTCTCCACAGACTGGGGATACATATGAAAACAGTGATCTCTGTTGAGAAATCAGAAGTGAACAGAACGATTCTGAAGAGCTGGTGGGATCAGACACAAACTGGAACGCTGATTGAAATCGCCGACGTGCGGCATCTTACTACTGAAAGAATTGAAACATTCATCAGAAGGTTTGGCGGTTTTGACCTGGTGATTGGTGGCAGCCCGTGCAACAACCTTGCTGGCAGCAACCGCCATCACCGAGATGGTCTGGAGGGCGAGCACTCCGCGCTCTTCTACGATTACATTAGAATATTAGAACATGTAAAGGCTACCATGTCAGCAGTCTAGTTTAAGCTATCACATTAACTAACTCTGTGATTTATTGTTGTTAACGAAGTTAGAACCTGTTGATTGATATTGCTGAACCTGATGTGATGTTATTGCACTCAAACAGGAGTGTTTTTTCC
CDS Sequence
- >LOC_Os03g02010.4
ATGCAGGCAATAGGCGGTGACGCTTCAGTGGGTAACTGCTCTGCTTCGGCCTGTGCCCCCCAGACTCTTGAAGTCGACGAGGAGGAGGATGATACTAATTGGGATGAATATGATACTGCTGGCAATTGTGACAGGACTCCTCACTCTGATGGTTCTGGTGACGAGGATTTCTTTCAAGAAATGTCAGAGAAGGATGAAAAAATGAAGTCCTTAGTCAACATGGGTTTTCCTGAAGATGAAGCAAAGATGGCTATCGATAGATGTCTCGATGCGCCTGTAGCAGTGTTGGTTGATTCAATCTATGCATCACAGGAAGCAGGAAATGGTTACTCTGCAAACTTATCTGACTATGAGGATACAGAGTTCAGTTCCTTTGGAGGAAGAAAGAAAACAAGATTTGTGGATGGAAGCAAGAAGAGAAAGCGGTATGGAAGTGGGCCATCTGGGAATCAAGTGCCGTTTGATGGCAGCCACGAAGAGCCCATGCCTCTTCCAAATCCAATGGTGGGATTCAGCTTGCCCAATGAGAGGTTAAGGTCAGTCCACAGAAATCTTCCTGACCAAGCTCTTGGGCCACCATTCTTTTACTATGAAAACGTGGCCCTAGCTCCAAAAGGTGTATGGACAACCATCTCAAGGTTTTTATATGACATTCAGCCTGAGTTTGTGGACTCCAAGTACTTTTGTGCTGCTGCCAGGAAGAGGGGTTATATTCATAACCTGCCGATTGAGAACAGGTCACCTGTTCTCCCAATGCCTCCCAAAACAATATCTGAAGCCTTTCCTAATACCAAGAGGTGGTGGCCTTCCTGGGATCCAAGGAGGCAGTTCAACTGCTTGCAAACTTGTATGGCAAGCGCAAAGCTTACAGAGCGAATTCGTTGTGCTTTGGGTAGATTCAGTGATGTACCAACTCCACAAGTTCAGAAGTATGTCTTGGACGAATGTAGGAAATGGAACCTAGTTTGGGTCGGAAAGAATAAGGTCGCTCCTCTAGAGCCTGATGAGATGGAGTTCCTGTTAGGGTACCCTAGAAACCACACTAGGGGAGTTAGCAGGACGGAGAGGTACAGGGCTCTCGGGAATTCATTCCAAGTTGATACAGTAGCATACCATCTCTCTGTGCTGAGGGACCTGTTTCCCAATGGAATGAATGTCTTATCCCTGTTTTCTGGTATTGGAGGAGCAGAGGTAGCTCTCCACAGACTGGGGATACATATGAAAACAGTGATCTCTGTTGAGAAATCAGAAGTGAACAGAACGATTCTGAAGAGCTGGTGGGATCAGACACAAACTGGAACGCTGATTGAAATCGCCGACGTGCGGCATCTTACTACTGAAAGAATTGAAACATTCATCAGAAGGTTTGGCGGTTTTGACCTGGTGATTGGTGGCAGCCCGTGCAACAACCTTGCTGGCAGCAACCGCCATCACCGAGATGGTCTGGAGGGCGAGCACTCCGCGCTCTTCTACGATTACATTAGAATATTAGAACATGTAAAGGCTACCATGTCAGCAGTCTAG
Protein Sequence
- >LOC_Os03g02010.4
MQAIGGDASVGNCSASACAPQTLEVDEEEDDTNWDEYDTAGNCDRTPHSDGSGDEDFFQEMSEKDEKMKSLVNMGFPEDEAKMAIDRCLDAPVAVLVDSIYASQEAGNGYSANLSDYEDTEFSSFGGRKKTRFVDGSKKRKRYGSGPSGNQVPFDGSHEEPMPLPNPMVGFSLPNERLRSVHRNLPDQALGPPFFYYENVALAPKGVWTTISRFLYDIQPEFVDSKYFCAAARKRGYIHNLPIENRSPVLPMPPKTISEAFPNTKRWWPSWDPRRQFNCLQTCMASAKLTERIRCALGRFSDVPTPQVQKYVLDECRKWNLVWVGKNKVAPLEPDEMEFLLGYPRNHTRGVSRTERYRALGNSFQVDTVAYHLSVLRDLFPNGMNVLSLFSGIGGAEVALHRLGIHMKTVISVEKSEVNRTILKSWWDQTQTGTLIEIADVRHLTTERIETFIRRFGGFDLVIGGSPCNNLAGSNRHHRDGLEGEHSALFYDYIRILEHVKATMSAV*