Gene Details:
- MSU gene ID: LOC_Os03g01870
- RAPdb gene ID: Os03g0109000
- Gene Symbol: OsNAC055
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Transcription factor OsNAC055 regulates GA-mediated lignin biosynthesis in rice straw.
- In this study, we identified a rice NAC (NAM, ATAF1/2, CUC2) transcription factor OsNAC055 that regulates GA-mediated lignin biosynthesis.
- As a nucleus-localized transcription factor, OsNAC055 exhibits the transcriptional activation activity.
- Together, our results provide the evidence that OsNAC055 functions as an essential transcription factor to regulate the GA-mediated lignin biosynthesis, which provides a strategy for manipulating lignin production.
- On the other hand, phytohormone measurement showed that OsNAC055 overexpression significantly increased exogenous GA3 levels in rice plants by regulating GA biosynthetic gene OsGA20ox2.
- Moreover, yeast two-hybrid and bimolecular fluorescence complement (BiFC) assays indicated that OsNAC055 interacts with SLENDER RICE1 (SLR1), the repressor in GA signaling.
- Overexpression of OsNAC055 increases the lignin content in rice straw.
- Further ChIP-qPCR analysis and transient transactivation assays indicated that OsNAC055 directly activates rice lignin biosynthetic genes CINNAMOYL-CoA REDUCTASE 10 (OsCCR10) and CINNAMYL ALCOHOL DEHYDROGENASE 2 (OsCAD2) by binding to their promoters.
Function-related keywords:
- transcription-factor , ga , GA , lignin , phytohormone , GA-biosynthetic , lignin-biosynthesis , dehydrogenase
Literature:
- Transcription factor OsNAC055 regulates GA-mediated lignin biosynthesis in rice straw . DOI: 10.1016/j.plantsci.2022.111455 ; PMID: 36152809
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os03g01870.1
TGCACGTAGTGTTCGATTAATTCTTGAGCTCATATATTACTTATTCATCCAAATAGTATTGGTAGCTTGTTGATCGAAGAATTAATCCATGGATGGATTGATCAGTGATGATAGTATGATGATGGGTGGTGAGGTGAGGGCGATCGAGTCGAGGCTGCCTCCGGGTTTCAGGTTCCATCCCAGCGACGAGGAGCTAGTCGGCTACTACCTTCGGAACAAGCAGCAGCAGCAGCAGCAGCAGACGGCGGCCACCTCCATGCTCGTCGAGGTTGACCTCCATGCCTGCGAGCCATGGGACCTACCAGAGGTGGCGAAGGTTGGTTCGGATGAGTGGTATTTCTTCAGCTGGAGGGAGAGGAAGTACGCGACGGGGTGGCGCAGGAACAGAGCGAGCAAGCAAGGGTACTGGAAGGCCACCGGGAAAGACAAGCCCATCCTTCATCCGACGGTGGCCGGCGCCAGGAAGACGTTGGTTTTCTACTCCGGTCGCGCCCCCAACGGCCGCAAGACCGCCTGGGTCATGCACGAGTTCCGCCTCCTCCATCATCATCATCATCCAAACCCAAATATTCAGAATATGCAGCAGCAGGAGGGGGATGACTGGGTGCTGTGCAGGGTGTTCCGTAAGGGGAACAACAGCAATGGACAACCTCTAGCCACTTCTTCGCCACCTGCTCATCACCTGGTGGAGTCACTCATCAGCTCACCTGCACCAACTATCATGAGCGATCACGATCGGCTCTTCACCATCCAGCTGCCGCATCACCAACATTGTGATGAGCAGTACTTTTTCTTAGATGACGATGAACAGCACCAGCAGCAGCTGCTAGATCTTTCAGTGCTCCAAGCTCCAACCTCGTTCGAGTCTGAGCAAGCTCCAGGCCACGGTGGCATGGAGATTAATATCGCAGAGATGGAGAGCTTCGACACGACCTGTGCTGCGCTGCAAGACGCGAGCGATTACTGCATGCAGCTCTATTAATTAATTCAATGGATGGATGAATCACACGTATATATACGCATAGCCTTAAATTAATTAATGTGTATCATCAGCTTAATTAATTGCGCACTTGGCTT
CDS Sequence
- >LOC_Os03g01870.1
ATGGATGGATTGATCAGTGATGATAGTATGATGATGGGTGGTGAGGTGAGGGCGATCGAGTCGAGGCTGCCTCCGGGTTTCAGGTTCCATCCCAGCGACGAGGAGCTAGTCGGCTACTACCTTCGGAACAAGCAGCAGCAGCAGCAGCAGCAGACGGCGGCCACCTCCATGCTCGTCGAGGTTGACCTCCATGCCTGCGAGCCATGGGACCTACCAGAGGTGGCGAAGGTTGGTTCGGATGAGTGGTATTTCTTCAGCTGGAGGGAGAGGAAGTACGCGACGGGGTGGCGCAGGAACAGAGCGAGCAAGCAAGGGTACTGGAAGGCCACCGGGAAAGACAAGCCCATCCTTCATCCGACGGTGGCCGGCGCCAGGAAGACGTTGGTTTTCTACTCCGGTCGCGCCCCCAACGGCCGCAAGACCGCCTGGGTCATGCACGAGTTCCGCCTCCTCCATCATCATCATCATCCAAACCCAAATATTCAGAATATGCAGCAGCAGGAGGGGGATGACTGGGTGCTGTGCAGGGTGTTCCGTAAGGGGAACAACAGCAATGGACAACCTCTAGCCACTTCTTCGCCACCTGCTCATCACCTGGTGGAGTCACTCATCAGCTCACCTGCACCAACTATCATGAGCGATCACGATCGGCTCTTCACCATCCAGCTGCCGCATCACCAACATTGTGATGAGCAGTACTTTTTCTTAGATGACGATGAACAGCACCAGCAGCAGCTGCTAGATCTTTCAGTGCTCCAAGCTCCAACCTCGTTCGAGTCTGAGCAAGCTCCAGGCCACGGTGGCATGGAGATTAATATCGCAGAGATGGAGAGCTTCGACACGACCTGTGCTGCGCTGCAAGACGCGAGCGATTACTGCATGCAGCTCTATTAA
Protein Sequence
- >LOC_Os03g01870.1
MDGLISDDSMMMGGEVRAIESRLPPGFRFHPSDEELVGYYLRNKQQQQQQQTAATSMLVEVDLHACEPWDLPEVAKVGSDEWYFFSWRERKYATGWRRNRASKQGYWKATGKDKPILHPTVAGARKTLVFYSGRAPNGRKTAWVMHEFRLLHHHHHPNPNIQNMQQQEGDDWVLCRVFRKGNNSNGQPLATSSPPAHHLVESLISSPAPTIMSDHDRLFTIQLPHHQHCDEQYFFLDDDEQHQQQLLDLSVLQAPTSFESEQAPGHGGMEINIAEMESFDTTCAALQDASDYCMQLY*